Details from NCBI annotation

Gene Symbol Hmga1
Gene Name high mobility group AT-hook 1, transcript variant X3
Entrez Gene ID 101700395

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HMGA1 ENSCPOG00000021788 (Guinea pig)

Gene Details

high mobility group AT-hook 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019605, Guinea pig)

Protein Percentage 99.07%
CDS Percentage 93.46%
Ka/Ks Ratio 0.01195 (Ka = 0.004, Ks = 0.3373)

HMGA1 ENSG00000137309 (Human)

Gene Details

high mobility group AT-hook 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000399888, Human)

Protein Percentage 98.13%
CDS Percentage 92.83%
Ka/Ks Ratio 0.0246 (Ka = 0.0083, Ks = 0.337)

Genome Location

Sequence Coding sequence

Length: 621 bp    Location: 22898877..22893195   Strand: -
>XM_004846747.1
ATGTGGCTTCTTGCGAGCCAGGCCTCCCTGATGTCCAGAAACAGGTGGGAGAGACAAGCGCTTCTTGGCCTCTCCCCTGGACCAGGCCTGGGCCTCGGTACCGTGGGGGCCTGGCGAGAGGAGGGGCGGGTGGGTCCCCAGCAGCGAGGGGTGGGGGCAGCACCAGAGGGCACAAGAGCTCCCCGACAACCCGCCAGGATCCCCAGCACCGGGCCCTGCTCAACTGGAACCCCCTTGAGGGACCCGAGCATCCCAGCCGGCGCTCCAACTGCCCCGTTGAGAAGGAAGATGAGCGAGTCAAGCTCGAAGTCCAGCCAGCCCCTGGCCTCCAAGCAGGAGAAGGACGGCACTGAGAAGCGAGGCCGGGGCAGGCCACGCAAACAGCCACCAGTGAGTCCGGTGAGTCCTGGGACAGCGCTGGTCGGGAGTCAGAAGGAGCCCAGTGAAGTGCCAACGCCTAAGAGACCGAGGGGCCGACCGAAGGGGAGCAAAAACAAGGGTGCTGCCAAGATCCGGAAAACTACCACGGCTCCAGGGAGGAAACCACGGGGCAGACCCAAAAAACTGGAGAAGGAGGAGGAGGAGGGCATCTCGCAGGAGTCCTCGGAGGAGGAGCAGTGA

Related Sequences

XP_004846804.1 Protein

Hmga1 PREDICTED: high mobility group protein HMG-I/HMG-Y isoform X3 [Heterocephalus glaber]

Length: 206 aa     
>XP_004846804.1
MWLLASQASLMSRNRWERQALLGLSPGPGLGLGTVGAWREEGRVGPQQRGVGAAPEGTRAPRQPARIPSTGPCSTGTPLRDPSIPAGAPTAPLRRKMSESSSKSSQPLASKQEKDGTEKRGRGRPRKQPPVSPVSPGTALVGSQKEPSEVPTPKRPRGRPKGSKNKGAAKIRKTTTAPGRKPRGRPKKLEKEEEEGISQESSEEEQ