Details from NCBI annotation

Gene Symbol Pnpla1
Gene Name patatin-like phospholipase domain containing 1
Entrez Gene ID 101713574

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PNPLA1 ENSCPOG00000003920 (Guinea pig)

Gene Details

patatin-like phospholipase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003539, Guinea pig)

Protein Percentage 80.16%
CDS Percentage 85.98%
Ka/Ks Ratio 0.32877 (Ka = 0.1114, Ks = 0.3389)

PNPLA1 ENSG00000180316 (Human)

Gene Details

patatin-like phospholipase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000378072, Human)

Protein Percentage 74.61%
CDS Percentage 78.74%
Ka/Ks Ratio 0.23397 (Ka = 0.1587, Ks = 0.6784)

Pnpla1 ENSMUSG00000043286 (Mouse)

Gene Details

patatin-like phospholipase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000050123, Mouse)

Protein Percentage 65.68%
CDS Percentage 69.43%
Ka/Ks Ratio 0.15218 (Ka = 0.2416, Ks = 1.5878)

Pnpla1 ENSRNOG00000028622 (Rat)

Gene Details

patatin-like phospholipase domain containing 1 (Pnpla1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000035242, Rat)

Protein Percentage 65.29%
CDS Percentage 69.43%
Ka/Ks Ratio 0.16364 (Ka = 0.2487, Ks = 1.5195)

Genome Location

Sequence Coding sequence

Length: 1527 bp    Location: 21410433..21378567   Strand: -
>XM_004846687.1
ATGGAGGAGCAGGTGTTCAAGGGGGACCCGGACACGCCCCACTCCATCTCCTTCTCGGGCAGTGGGTTCCTCTCCTACTACCAGGCCGGGGCTGTGGACGCCCTGCGGGACCTGGCTCCCCGCATGCTGGACACGGCCCATCGCTTTGCCGGGACTTCGGCAGGGGCGGTGATCGCAGCCCTGGTCATCTGCGGGATCGAGATGGAGGAGTACCTGCGCGTCCTGAACCTGGGCCTGGCCGAGGTGAAGAAGTACTTCCTGGGCCCCTTCGCGCCGTCCTGCAGGATGGTGCAGATGATGAGGCGGTTCCTGTACACCGCGCTGCCGGAGGACGCCTACAAGGTCGCCACTGGGAAGCTGCACGTGGGCCTCACGCGCTTCGAGGACGGGGAGAGCGTGGTGGTGTCCGACTTCACATCCAAGGAGGAGCTCATCGAGGCCCTGTACTGCAGCTGCTTCGTTCCCGTGTACTGCGGCTTCATCCCCCCAACGTACCGCGGCGTGAGGTACATCGACGGCGGCTTCACCAGCATGCAGCCCTGCCCCTTCTGGACAGACTCCATCACCATCTCCACCTTCAGCGGGCAGCAGGACATCTGTCCCCGGGACTGCCCCGCCATCTTCAACGACTTCCGCATGTTCAACTACTCCTTCCAGTTCTCCCTGGAGAACATCACCCGGATGACCCACGCCCTGTTCCCCCCGGACCTGGTGATCCTGCAGGATTACTACTACCGAGGCTACGAGGACGCGGTGGCATACCTGAGGCGGCTGAATGCTGTGTACATCAATTCGCCCTCCAGGAGCGTGATGTTCCCGCGCGTGGAGGTGTACTCCCAGATAGAGCTGGCGCTGGGCCCTAAGTGTCCCCAGAGCCCCTGGCCCCGGCCAGAGGAGCCTGCTCCACTCCATGCACACTGGGCTCCCCGGGGGGCCGGAAAGGGCAGCCACCCATCTGCGCCCCCACCTGTGCAGATGCTTGAGCCCATGAGTGAGGGGCCCCTGGGGTCACCTGTCTCTTCACTCAAGCCGTCACCTCCGTTGCTGCCGGGCTCACCACTGCCACGTTCTCCAGGTGACTTAGCACCTGGGCACTTCATCCCCAGCTCAACACCTGGGTCATCACCACCCGTTGTACCCCCTGGGCGGTCACTTGTGTCACCTCGGCAGCAGGTACAACCATCTGGAGTCCCATTCAACACATCTACGTCCCCAAGGCCTTCGGCTGTCCCTGCACCTCCAACGTCACCCCGAGGCTGTCCATCAGCGTCACCTGCTCGGCCACCCGTGGAGTTGCTAGGCCCAGAGCAACCCCGAGCTCTCCTCGCCTCTTCAAATCCAAAAAGTGCCACAGCTCCAACTAATGTGAAGGAAACTGTCAGCAAGTCCAATGTGATGGAGAGCCCCACTGCAGACTCGAACTGGGCGAACAAAGTATTCAAGAGGAACAAACAAAAGACAAGCAGCTCCCGGAAAGGCTTCCCAAGACATCCTCCAGCCAAAACACCTAACAGCAAAGTGCAGTGA

Related Sequences

XP_004846744.1 Protein

Pnpla1 PREDICTED: patatin-like phospholipase domain-containing protein 1 [Heterocephalus glaber]

Length: 508 aa      View alignments
>XP_004846744.1
MEEQVFKGDPDTPHSISFSGSGFLSYYQAGAVDALRDLAPRMLDTAHRFAGTSAGAVIAALVICGIEMEEYLRVLNLGLAEVKKYFLGPFAPSCRMVQMMRRFLYTALPEDAYKVATGKLHVGLTRFEDGESVVVSDFTSKEELIEALYCSCFVPVYCGFIPPTYRGVRYIDGGFTSMQPCPFWTDSITISTFSGQQDICPRDCPAIFNDFRMFNYSFQFSLENITRMTHALFPPDLVILQDYYYRGYEDAVAYLRRLNAVYINSPSRSVMFPRVEVYSQIELALGPKCPQSPWPRPEEPAPLHAHWAPRGAGKGSHPSAPPPVQMLEPMSEGPLGSPVSSLKPSPPLLPGSPLPRSPGDLAPGHFIPSSTPGSSPPVVPPGRSLVSPRQQVQPSGVPFNTSTSPRPSAVPAPPTSPRGCPSASPARPPVELLGPEQPRALLASSNPKSATAPTNVKETVSKSNVMESPTADSNWANKVFKRNKQKTSSSRKGFPRHPPAKTPNSKVQ