Sequence details NCBI ID: XM_004846676.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cpne5
Gene Name copine V
Entrez Gene ID 101710188

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CPNE5 ENSCPOG00000019269 (Guinea pig)

Gene Details

copine V

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020387, Guinea pig)

Protein Percentage 93.64%
CDS Percentage 90.3%
Ka/Ks Ratio 0.06717 (Ka = 0.0406, Ks = 0.6041)

CPNE5 ENSG00000124772 (Human)

Gene Details

copine V

External Links

Gene Match (Ensembl Protein ID: ENSP00000244751, Human)

Protein Percentage 98.31%
CDS Percentage 91.14%
Ka/Ks Ratio 0.00952 (Ka = 0.007, Ks = 0.7389)

Cpne5 ENSMUSG00000024008 (Mouse)

Gene Details

copine V

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024805, Mouse)

Protein Percentage 97.46%
CDS Percentage 88.44%
Ka/Ks Ratio 0.01029 (Ka = 0.0107, Ks = 1.0378)

Cpne5 ENSRNOG00000000522 (Rat)

Gene Details

copine V (Cpne5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000629, Rat)

Protein Percentage 97.29%
CDS Percentage 88.61%
Ka/Ks Ratio 0.01164 (Ka = 0.012, Ks = 1.0324)

Genome Location

Sequence Coding sequence

Length: 1776 bp    Location: 20995411..21068135   Strand: +
Raw sequence   
>XM_004846676.1
ATGGAGCAGCCCGAGGACATGGCGTCGCTGAGCGAGTTCGACTCCTTGGCGGGCAGCATCCCCGCCACCAAGGTGGAGATCACCGTGTCCTGCAGGAACCTCTTGGACAAAGACATGTTTTCCAAGTCTGACCCACTGTGTGTCATGTATACTCAAGGGATGGAGAACAAGCAGTGGCGGGAGTTTGGGCGCACGGAGGTCATCGACAACACGCTGAACCCCGACTTCGTGCGCAAGTTCATCGTGGATTACTTCTTCGAGGAGAAGCAAAACCTCCGCTTCGACCTGTATGATGTTGACTCCAAGAGCCCTGATTTGTCCAAACACGATTTCCTGGGCCAGGCCTTCTGCACCCTTGGAGAGATTGTAGGGTCCTCTGGGAGCCGCCTGGAGAAGCCCCTCACCATAGGAGCGTTCAGCCTCAACTCCAGGACGGGCAAGCCCATGCCAGCTGTGTCCAATGGCGGTGTCCCAGGGAAGAAATGTGGCACCATCATCCTGGCTGCCGAGGAGCTCAGCAACTGTCGGGACGTGGCCACCATGCAGTTCTGTGCCAACAAGCTGGACAAGAAGGACTTTTTCGGGAAGTCTGACCCCTTCTTGGTGTTCTACCGAAGCAACGAGGACGGAACATTCACCATTTGCCACAAGACCGAGGTCATGAAGAACACCCTGAACCCCGTGTGGCAGACATTCTCCATCCCCGTCAGAGCCCTCTGCAATGGGGACTACGACAGGACCATCAAGGTGGAGGTGTATGACTGGGACCGAGATGGCAGCCACGACTTCATCGGGGAGTTTACCACCAGCTACCGCGAGCTGGCACGCGGGCAAAGCCAGTTCAACATCTACGAGGTGATCAACCCAAAAAAGAAAATGAAGAAAAAGAAATACGTGAATTCTGGCACGGTCACCCTGCTCTCCTTCGCTGTGGAGTCCGAGTGCACCTTCCTTGACTACATCAAAGGAGGGACCCAGATCAACTTCACAGTGGCCATTGACTTCACCGCCTCCAACGGGAACCCCTCGCAGTCGACGTCCCTGCACTACATGAGCCCTTACCAGCTGAACGCCTATGCGCTGGCGCTGACTGCTGTCGGGGAGATCATCCAGCACTATGACAGCGACAAGATGTTCCCCGCCCTGGGCTTCGGGGCCAAGCTGCCCCCTGACGGCCGGGTGTCCCATGAGTTCCCGCTGAACGGCAACCAGGAAAACCCCTCGTGCTGCGGCATCGACGGCATCCTGGACGCCTACCACCGCAGCCTGCGCACTGTGCAGCTCTACGGCCCCACCAACTTCGCGCCCGTGGTCACCCACGTGGCCAGGAGCGCGGCGGCCGTGCAGGACGGCTCCCAGTACTCAGTGCTGCTCATCATCACCGACGGCGTCATCTCCGACATGGCACAGACCAAGGAGGCCATCGTCAACGCTGCCAAGCTCCCCATGTCCATCATCATCATCGGCGTGGGCCAGGCGGAGTTTGACGCCATGGTGGAGCTGGACGGCGATGACGTGAGGATCTCTTCCCGAGGGAAGCTGGCTGAGCGCGACATTGTCCAGTTTGTGCCCTTCCGGGACTACGTGGACCGCACAGGCAACCACGTGCTGAGCATGGCCCGCCTGGCCCGAGACGTGCTGGCCGAGATCCCGGACCAGCTGGTGTCCTACATGAAGGCGCAGGGCATCCGCCCCCGGCCCCCACCCGCAGCGCCCACACACTCCCCTCCCAAGTCACCGGCCCGCACGCCCCCCGAGTCCCCCCTGCATATCTGA

Related Sequences

XP_004846733.1 Protein

Cpne5 PREDICTED: copine-5 [Heterocephalus glaber]

Length: 591 aa      View alignments
>XP_004846733.1
MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWREFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLGEIVGSSGSRLEKPLTIGAFSLNSRTGKPMPAVSNGGVPGKKCGTIILAAEELSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVINPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILDAYHRSLRTVQLYGPTNFAPVVTHVARSAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNAAKLPMSIIIIGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVPFRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPPKSPARTPPESPLHI