Sequence details NCBI ID: XM_004846654.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Mdga1
Gene Name MAM domain containing glycosylphosphatidylinositol anchor 1, transcript variant X2
Entrez Gene ID 101702059

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MDGA1 ENSCPOG00000000671 (Guinea pig)

Gene Details

MAM domain containing glycosylphosphatidylinositol anchor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000593, Guinea pig)

Protein Percentage 96.51%
CDS Percentage 94.4%
Ka/Ks Ratio 0.04139 (Ka = 0.0146, Ks = 0.3529)

MDGA1 ENSG00000112139 (Human)

Gene Details

MAM domain containing glycosylphosphatidylinositol anchor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000402584, Human)

Protein Percentage 97.07%
CDS Percentage 91.83%
Ka/Ks Ratio 0.02381 (Ka = 0.0132, Ks = 0.556)

Mdga1 ENSMUSG00000043557 (Mouse)

Gene Details

MAM domain containing glycosylphosphatidylinositol anchor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073246, Mouse)

Protein Percentage 95.46%
CDS Percentage 89.28%
Ka/Ks Ratio 0.02902 (Ka = 0.0207, Ks = 0.712)

MDGA1 ENSRNOG00000000536 (Rat)

Gene Details

MAM domain-containing glycosylphosphatidylinositol anchor protein 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000040424, Rat)

Protein Percentage 94.77%
CDS Percentage 88.88%
Ka/Ks Ratio 0.031 (Ka = 0.0236, Ks = 0.7611)

Genome Location

Sequence Coding sequence

Length: 2880 bp    Location: 20434648..20481206   Strand: +
Raw sequence   
>XM_004846654.1
ATGGAGGTGACCTGCCTTCTGCTCCTGGCGCTGATCCCCTTCCACTGCCGGGGACAGGGAGTCTATGCTCCAGCCCAGGCCCAGATTGTGCACGCGGGCCAGGCGTGCGTGGTGAAGGAGGACAACATCAGCGAGCGCGTCTACACCATCCGGGAGGGGGACACCCTTGTGCTGCAGTGCCTGGTCACTGGGCACCCTCGCCCGCAGGTGCGGTGGACCAAGACCGCGGGGAGCGCATCTGACAAGTTCCAGGAGACGTCGGTGTTCAATGAGACGCTGCGCATCGAGCGCATCGCGCGCACGCAGGGCGGCCGCTACTACTGCAAGGCGGAGAACGGCGTGGGCGTGCCGGCCATCAGGTCCATCCGCGTGGACGTGCAGTACCTGGATGAGCCGATGCTGACAGTGCACCAGACAGTGAGTGACGTGCGGGGCAACTTCTACCAGGAGAAGACGGTGTTCCTCCGCTGCACGGTCAACTCCAACCCACCTGCCCGCTTCATCTGGAAGCGGGGCTCGGACACCCTGTCCCACAGCCAGGACAACGGCGTCGACATCTACGAGCCCCTGTACACCCAGGGGGAGACCAAGGTCCTGAAACTGAAGAACCTGCGGCCCCAAGACTACGCCAGCTATACCTGCCAGGTGTCTGTACGAAATGTGTGTGGGATCCCAGACAAGGCCATCACCTTCCAGCTCACCAACACCACAGCACCGCCAGCCCTAAAGTTGTCTGTGAACGAGACTTTGGTGGTGAACCCTGGGGAGAATGTGACAGTGCAGTGCCTGCTGACGGGCGGCGATCCTCTGCCCCAGCTGCAGTGGTCCCATGGGCCTGGCCCACTCCCCCTGGGTGCCCTGGCCCAGGGTGGCACCCTCCGCATCCCTTCAGTGCAGGCCGGGGACTCTGGCTACTACAACTGCACGGCCACCAACAACGTGGGCAACCCTGCGAAGAAGACTGTCAACCTGCTGGTGCGGTCCATGAAGAATGCCACCTTCCAGATCACCCCAGATGTGATCAAAGAGAGTGAGAACATACAGCTGGGCCAGGACCTCAAGCTGTCATGCCACGTGGATGCGACGCCCCAGGAGAAGGTCACCTACCAGTGGTTCAAGAATGGCAAGCCAGCGCGCATGTCCAAGCGGCTTCTGGTGACCCGCAATGACCCTGAGCTGCCTGCCGTCACCAGCAGCCTGGAGCTCATCGACCTGCATTTCAGTGACTATGGCACCTACCTGTGCATGGCTTCCTTCCCAGGGGCACCTGTGTCTGACCTCAGTGTCGAGGTCAACATCTCCTCCGAGACAGTGCCCCCCACCATCAGCGTGCCCAAGGGCAGGGCGGTGGTCACAGTGCGCGAGGGCTCGCCCGCCGAGCTCCACTGCGAGGTGCGCGGCAAGCCCCGGCCGCCCGTGCTCTGGTCGCGCGTGGACAAGGAGGCTGCCCTGCTGCCCTCGGGGCTGGCCCTGGAGGAGACGCCGGACGGGAAGCTGCGGCTGGAGCGCGTGAGCCGCGACATGAGCGGCACTTACCGCTGCCAGACGGCTCGCTACAACGGCTTCAACGTGCGCCCTCGCGAGGCCCAGGTGCAGCTGAATGTGCAGTTCCCGCCCGAGGTGGAGCCCGAGACCCAGGACGTGCGCCAGGCGCTGGGCCGGCCCGTCCTCCTGCGCTGCGCGCTCCTGCGCGGCAACCCCCAGCGCATCGGCTCGGCCGCTTGGCGCTTCAAGGGGCAGCTGCTACCTCCGCCGCCTGTTGTCCCCGCCGCCGCCGCCGCCGCCGCCGAGGCCCCGGACCACGCCGAGCTGCGCCTGGACGCCTTGACCCGTGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAATGATGTGGGGTCGGCCGCCTGCCTCTTCCAGGTCTCCGCCAAAGCCTACAGCCCGGAGTTTTACTTCGACACCCCCAACCCCACCCGCAGCCACAAGCTGTCCAAGAACTACTCCTACGTGCTGCAGTGGACGCAGAGGGAGCCTGATGCAGTGGACCCTGTGCTCAACTACAGACTCAGTGTCCGGCAGCTGAACCAGCACAACACCGTGGTCAAAGCCATCCCCGTAAGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACATCCTGACTGATCTCCGTGTGCCCCACAGCTATGAGATCCGCCTCACACCCTATACCACTTTTGGGGCTGGTGACATGGCTTCCCGAATCATCCACTACACAGAGCCCATCAACTCTCCAAACCTGTCAGATAACACCTGCCACTTCGAGGAGGAGAAGATATGTGGCTACACCCAGGACCTGACAGACAACTTTGACTGGACCAGGCAGAACGCCCTCACCCAGAACCCCAAGCGCTCCCCCAACACTGGGCCCCCCACGGACATCAGTGGCACCCCTGAGGGCTACTACATGTTCATTGAGACATCCCGGCCCCGGGAGCTGGGGGACCGTGCGAGGTTGGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGCGTCTCTTTCTTCTACCACATGTATGGGAAGCACATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCCCTCAGTGGCAATAAGGGCAACGTGTGGCAGCAGGCTCATGTGCCCATCATCCCCAGTGGGCCCTTCCAGATTATCTTTGAGGGGGTTCGAGGCTCGGGCTACCTGGGGGATATTGCCATAGACGATGTCACACTGAAGAAGGGAGAGTGTCCCCGGAAGCAGATGGATCCCAATAAAGTGGTGGTGATGCCGGGCAGCGGAGCCCCCCGCCAGGCCAGCCTGCAGCTCTGGGGGCCCACGGCCGTCTTCCTCTTGGCGTTGCAAAGATGA

Related Sequences

XP_004846711.1 Protein

Mdga1 PREDICTED: MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X2 [Heterocephalus glaber]

Length: 959 aa      View alignments
>XP_004846711.1
MEVTCLLLLALIPFHCRGQGVYAPAQAQIVHAGQACVVKEDNISERVYTIREGDTLVLQCLVTGHPRPQVRWTKTAGSASDKFQETSVFNETLRIERIARTQGGRYYCKAENGVGVPAIRSIRVDVQYLDEPMLTVHQTVSDVRGNFYQEKTVFLRCTVNSNPPARFIWKRGSDTLSHSQDNGVDIYEPLYTQGETKVLKLKNLRPQDYASYTCQVSVRNVCGIPDKAITFQLTNTTAPPALKLSVNETLVVNPGENVTVQCLLTGGDPLPQLQWSHGPGPLPLGALAQGGTLRIPSVQAGDSGYYNCTATNNVGNPAKKTVNLLVRSMKNATFQITPDVIKESENIQLGQDLKLSCHVDATPQEKVTYQWFKNGKPARMSKRLLVTRNDPELPAVTSSLELIDLHFSDYGTYLCMASFPGAPVSDLSVEVNISSETVPPTISVPKGRAVVTVREGSPAELHCEVRGKPRPPVLWSRVDKEAALLPSGLALEETPDGKLRLERVSRDMSGTYRCQTARYNGFNVRPREAQVQLNVQFPPEVEPETQDVRQALGRPVLLRCALLRGNPQRIGSAAWRFKGQLLPPPPVVPAAAAAAAEAPDHAELRLDALTRDSSGSYECSVSNDVGSAACLFQVSAKAYSPEFYFDTPNPTRSHKLSKNYSYVLQWTQREPDAVDPVLNYRLSVRQLNQHNTVVKAIPVRRVEKGQLLEYILTDLRVPHSYEIRLTPYTTFGAGDMASRIIHYTEPINSPNLSDNTCHFEEEKICGYTQDLTDNFDWTRQNALTQNPKRSPNTGPPTDISGTPEGYYMFIETSRPRELGDRARLVSPLYNASAKFYCVSFFYHMYGKHIGSLNLLVRSRNKGALDTHAWSLSGNKGNVWQQAHVPIIPSGPFQIIFEGVRGSGYLGDIAIDDVTLKKGECPRKQMDPNKVVVMPGSGAPRQASLQLWGPTAVFLLALQR