Sequence details NCBI ID: XM_004846627.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrfn2
Gene Name leucine rich repeat and fibronectin type III domain containing 2
Entrez Gene ID 101722867

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRFN2 ENSCPOG00000022499 (Guinea pig)

Gene Details

leucine rich repeat and fibronectin type III domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018327, Guinea pig)

Protein Percentage 96.46%
CDS Percentage 92.92%
Ka/Ks Ratio 0.03166 (Ka = 0.0157, Ks = 0.497)

LRFN2 ENSG00000156564 (Human)

Gene Details

leucine rich repeat and fibronectin type III domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000345985, Human)

Protein Percentage 94.55%
CDS Percentage 89.44%
Ka/Ks Ratio 0.0309 (Ka = 0.0257, Ks = 0.8314)

Lrfn2 ENSMUSG00000040490 (Mouse)

Gene Details

leucine rich repeat and fibronectin type III domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047573, Mouse)

Protein Percentage 94.67%
CDS Percentage 86.51%
Ka/Ks Ratio 0.0249 (Ka = 0.0269, Ks = 1.0791)

Lrfn2 ENSRNOG00000011803 (Rat)

Gene Details

leucine rich repeat and fibronectin type III domain containing 2 (Lrfn2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015705, Rat)

Protein Percentage 95.05%
CDS Percentage 86.29%
Ka/Ks Ratio 0.02119 (Ka = 0.0249, Ks = 1.1753)

Genome Location

Sequence Coding sequence

Length: 2379 bp    Location: 18173480..18200764   Strand: +
Raw sequence   
>XM_004846627.1
ATGGAGACCCTGCTTGGCGGGCTGCTGGCATTTGGCATGGCGTTTGCTGTGGTCGATGCCTGCCCCAAGTACTGCGTCTGCCAGAACCTGTCTGAGTCACTGGGGACCCTGTGCCCCTCCAAGGGGCTGCTCTTCGTGCCCCCTGACATCGATCGGCGGACCGTGGAGCTGCGCCTGGGTGGCAACTTCATCATCCACATCGGCCGCCAGGACTTCGCCAACATGACGGGGCTGGTGGACCTGACGCTGTCCAGGAACACCATCAGCCACATCCAGCCCTTCTCCTTCCTGGACCTCGAGAGCCTGCGCTCGCTGCACCTGGACAGCAACCGGCTGCCCAGCCTCGGGGAGGACACGCTCCGCGGCCTGGTCAACCTGCAGCACCTCATCGTGAACAACAACCAGCTGGGTGGCATCGCAGACGATGCCTTCGAGGACTTCCTGCTCACGCTGGAGGACCTGGACCTCTCCTACAACAACCTGCACGGCCTGCCCTGGGACTCCGTGCGCCGCATGGTCAACCTGCACCAGCTGAGCCTGGACCACAACCTGCTGGACCACATTGCCGAGGGCACCTTCGCCGACCTGCAGAAACTGGCCCGCCTGGACCTCACCTCCAACAGGCTGCAGAAGCTGCCCCCGGACCCCATCTTCGCCCGCTCCCAGGCTTCCCTCCTGACCGCCACGCCCTTCGCGCCGCCCTTGTCCTTCAGCTTCGGGGGGAACCCGCTGCACTGCAACTGTGAGCTCCTCTGGCTGCGGCGGCTGGAGAGGGACGACGACCTGGAGACCTGTGGATCCCCCGGGGGCCTCAAGGGCCGCTACTTCTGGCACGTGCGCGAGGAGGAGTTCACGTGTGAGCCGCCGCTCATCACCCAGCACACGCACAAGCTGCTGGTGCTGGAGGGCCAGGCGGCCACGCTCAAGTGCAAGGCCATCGGGGACCCCAGCCCCCTCATCCACTGGGTGGCCCCCGACGACCGCCTGGTGGGCAACTCCTCGCGCACGGCCGCGTACGACAACGGCACCCTGGACATCCTCATCACCACATCTCAGGACAGCGGCGCCTTCACCTGCATCGCGGCCAACGCAGCGGGAGAGGCCACGGCCACCGTGGAGGTGTCCATCGTGCAGCTGCCCCACCTCAGCAACAGCACCGGCCGCGCCACGCCCCCCAAGTCCCGCCTCTCCGACATCACCGGCTCCAGCAAGACCGGCCGGGGAGGCGCAGGCAGTGGGGGCGGAGAGCCCCCCAAAGGCACCCCGGAGCGGGCCGTGCTCGTGTCCGACGTGACCACCACCTCGGCCCTGGTCAAGTGGTCCGTCAGCAAGTCGGCGCCCAGGGTGAAGATGTACCAGCTGCAGTACAACTGCTCCGAGGATGAGGTGCTGATTTACAGGATGATCCCAGCCTCCAACAAGGCCTTCGTGGTGAACAACCTGGTGTCAGGGACAGGTTACGACCTGTGCGTGCTGGCCATGTGGGATGACACGGCTACGACGCTCACAGCTACCAACATCGTGGGCTGCGCCCAGTTCTTCACCAAGGCTGACTACCCGCAGTGCCAGTCCATGCACAGCCAGATCCTGGGTGGCACCATGATCCTGGTCATCGGGGGTATCATTGTGACCACACTGCTGGTCTTTATCGTCATCCTCATGGTGCGCTACAAGGTCTGCAGCCACGAGGGCCCTGGAAAGATGGCAGCAGCGGCTGTCAGCAATGTGTACTCACAGACCAATGGGGCCCAGCCGCCGGCCCTGGGCAGTGTGCCCGCTGGGCAGCCCCCACAGGCGCCACCCAAGGTTGTGGTGCGGAACGAGCTCCTGGACTTCAGTGCCAGCCTGGCCCGAGCCAGCGACTCTTCCTCCTCCAGCTCCCTGGGCAGCGGGGAGGCAGCGGGGCTGGCACGGGGCCCCTGGAGGCTCCCGCCCCCTGTCACCCGCCCCAAGCCCAACCTTGACCGCCTGATGGGGGCCTTCGCCTCCCTGGACCTCAAGAGTCAGAGGAGGGAGGAGCTGCTGGACTCCAGGACTCCAGCCGGGAAAGGGTGTGGGACGCAGGCCAGGGGCCAGCACTCAGACCGAGAGCCACTGCTGGGGCCCCCGGCCGCCCGTGCCAGAAGCCTGCTCCCCTTGCCCCTGGAGGGCAAGACCAAGCGCAGCCACTCCTTCGATATGGGGGACTTTGCAGCTGCAGTGGCTGCGGCGGGAGGGGTGGCCCCCGGCGGCTACAGCCCCCCTCGGAGGGTCTCGAACATCTGGACGAAGCGCAGCCTCTCCGTCAATGGCATGCTCCTGCCCTTTGAGGAGAGTGACCTGGTGGGGCCCCGGGGGACTTTCGGCAGCTCTGAGTGGGTGATGGAGAGCACCGTGTAG

Related Sequences

XP_004846684.1 Protein

Lrfn2 PREDICTED: leucine-rich repeat and fibronectin type-III domain-containing protein 2 [Heterocephalus glaber]

Length: 792 aa      View alignments
>XP_004846684.1
METLLGGLLAFGMAFAVVDACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHIGRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPIFARSQASLLTATPFAPPLSFSFGGNPLHCNCELLWLRRLERDDDLETCGSPGGLKGRYFWHVREEEFTCEPPLITQHTHKLLVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSSRTAAYDNGTLDILITTSQDSGAFTCIAANAAGEATATVEVSIVQLPHLSNSTGRATPPKSRLSDITGSSKTGRGGAGSGGGEPPKGTPERAVLVSDVTTTSALVKWSVSKSAPRVKMYQLQYNCSEDEVLIYRMIPASNKAFVVNNLVSGTGYDLCVLAMWDDTATTLTATNIVGCAQFFTKADYPQCQSMHSQILGGTMILVIGGIIVTTLLVFIVILMVRYKVCSHEGPGKMAAAAVSNVYSQTNGAQPPALGSVPAGQPPQAPPKVVVRNELLDFSASLARASDSSSSSSLGSGEAAGLARGPWRLPPPVTRPKPNLDRLMGAFASLDLKSQRREELLDSRTPAGKGCGTQARGQHSDREPLLGPPAARARSLLPLPLEGKTKRSHSFDMGDFAAAVAAAGGVAPGGYSPPRRVSNIWTKRSLSVNGMLLPFEESDLVGPRGTFGSSEWVMESTV