Details from NCBI annotation

Gene Symbol Pgc
Gene Name progastricsin (pepsinogen C)
Entrez Gene ID 101713573

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PGC ENSCPOG00000007183 (Guinea pig)

Gene Details

Cavia porcellus progastricsin (pepsinogen C) (Pgc), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006477, Guinea pig)

Protein Percentage 77.18%
CDS Percentage 82.74%
Ka/Ks Ratio 0.19741 (Ka = 0.1348, Ks = 0.6828)

PGC ENSG00000096088 (Human)

Gene Details

progastricsin (pepsinogen C)

External Links

Gene Match (Ensembl Protein ID: ENSP00000362116, Human)

Protein Percentage 71.91%
CDS Percentage 80.41%
Ka/Ks Ratio 0.19436 (Ka = 0.1563, Ks = 0.8042)

Pgc ENSMUSG00000023987 (Mouse)

Gene Details

progastricsin (pepsinogen C)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024782, Mouse)

Protein Percentage 71.28%
CDS Percentage 77.09%
Ka/Ks Ratio 0.1345 (Ka = 0.1727, Ks = 1.2837)

Pgc ENSRNOG00000014492 (Rat)

Gene Details

progastricsin (pepsinogen C) (Pgc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019650, Rat)

Protein Percentage 72.31%
CDS Percentage 77.95%
Ka/Ks Ratio 0.15226 (Ka = 0.1681, Ks = 1.1043)

Genome Location

Sequence Coding sequence

Length: 1176 bp    Location: 17311755..17319675   Strand: +
>XM_004846599.1
ATGAAGTGGATGGTAGTGGCCTTGCTCTGCCTGCCGCTCTTGGAGGCAACGAAGCTCAAGATCCCCCTGAAGAAGTTCAAGTCCATCCGTGAGACCATGAGGGACAAGGGCTTGCTGGGAGACTTCCTGAAGACCCACAAGCAGGACCACATCCGGAAGTTGAGCAACAACTTTGACCACTTCAGCGTGCTGTTTGAGCCCATGTCCTACCTGGACGCTGCCTACTTTGGTGAGATCAGCCTCGGGACCCCACCCCAGAGCTTCCAGGTCCTGTTTGACACTGGCTCCTCCAACCTGTGGGTGCCATCTGTCTACTGCCAGAGCCTGGCCTGCACCACTCACCCCCGCTTCAACCCCAGCAAGTCCTCCACCTACACCTCCACTGGACAGTCCTTCTCCCTGCAGTATGGCAGCGGCAGCCTCACAGGCGTCTTTGGCTACGACACCATGACTATCCAAGGAACCCAGGTACCCAAGCAGGAGTTTGGCCTCAGTGAGCAAGAGCCAGGCACCACCTTTGTCTACGCCCAGTTCGATGGCATCATGGGCCTGGGCTACCCCGGCCTGGCCGCGGGGGGCGCCACCACTGCTCTGCAGGGCCTGATCCGGGAAGGCGCCCTCTCCCAACCCCTCTTCAGCGTCTACCTGGGCAGCCAGCAGGGCTCTTCGGACGGGGGCGCACTCATCCTGGGCGGTGTGGACGAAAGCCTGTACAACGGGCAGATTTCCTGGACGCCGGTCACTCAGGAACTCTACTGGCAGATCGGCATTGAAGATGTGCAGCTTGATAACCAGGCCTTGGGCTGGTGCTCCCAGGGGTGCCAGGGCATTGTGGACACTGGCACCTCCCTGCTCACCTTGCCCCAGCAGTACCTGACCACCCTGATACAGGCCATAGGGGCCCAGGAGAATGAGTTCGGAGAGTATGTAGTGGACTGTAACAGCATCCAGAGCCTCCCCACTCTGACTGTCATCCTCAGTGGCGTGAAGTTTCCTCTGCTGCCCTCGGCCTACATCCTCCAAGAGGACCAGTACTGCATGGTGGGGCTCTCCGCCACCTACCTGTACTCGGAGAGCAGCCAGCCCCTCTGGATCCTCGGGGATGTCTTCCTGAGGTCCTACTACTCCGTCTTTGACTTGGGCAACAACAGGGTGGGCTTTGCCCCTGCCATCTAG

Related Sequences

XP_004846656.1 Protein

Pgc PREDICTED: gastricsin [Heterocephalus glaber]

Length: 391 aa      View alignments
>XP_004846656.1
MKWMVVALLCLPLLEATKLKIPLKKFKSIRETMRDKGLLGDFLKTHKQDHIRKLSNNFDHFSVLFEPMSYLDAAYFGEISLGTPPQSFQVLFDTGSSNLWVPSVYCQSLACTTHPRFNPSKSSTYTSTGQSFSLQYGSGSLTGVFGYDTMTIQGTQVPKQEFGLSEQEPGTTFVYAQFDGIMGLGYPGLAAGGATTALQGLIREGALSQPLFSVYLGSQQGSSDGGALILGGVDESLYNGQISWTPVTQELYWQIGIEDVQLDNQALGWCSQGCQGIVDTGTSLLTLPQQYLTTLIQAIGAQENEFGEYVVDCNSIQSLPTLTVILSGVKFPLLPSAYILQEDQYCMVGLSATYLYSESSQPLWILGDVFLRSYYSVFDLGNNRVGFAPAI