Details from NCBI annotation

Gene Symbol Ptcra
Gene Name pre T-cell antigen receptor alpha, transcript variant X2
Entrez Gene ID 101726742

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTCRA ENSCPOG00000011961 (Guinea pig)

Gene Details

pre T-cell antigen receptor alpha

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010760, Guinea pig)

Protein Percentage 77.33%
CDS Percentage 82.17%
Ka/Ks Ratio 0.23404 (Ka = 0.1336, Ks = 0.5707)

PTCRA ENSG00000171611 (Human)

Gene Details

pre T-cell antigen receptor alpha

External Links

Gene Match (Ensembl Protein ID: ENSP00000304447, Human)

Protein Percentage 71.51%
CDS Percentage 74.55%
Ka/Ks Ratio 0.19978 (Ka = 0.1949, Ks = 0.9756)

Ptcra ENSRNOG00000042581 (Rat)

Gene Details

Pre T-cell antigen receptor alpha

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059713, Rat)

Protein Percentage 67.74%
CDS Percentage 72.76%
Ka/Ks Ratio 0.19367 (Ka = 0.2114, Ks = 1.0916)

Genome Location

Sequence Coding sequence

Length: 801 bp    Location: 16547395..16543012   Strand: -
>XM_004846546.1
ATGCGCCCCGCGTTGGGGGGCGGGACGCAGAGCTGGCAGGTGCCCCGGAGGCCTCCCCCTGCGGTGCTCTTCAGAAGGGAGGAACCCTCCTGCCGGCGTGGGAGGACCCTGGGAGGGGACACGGCTGGTGGCAAGCAGCTGGGGTGCAGCTGGCAGTGGGCGCCTCCCTCCCCGTGGGCCATGGCAGGGATGTGCCCGCTGCTTCTCCTGGCCCTCGGGTGTGCAGCTCTGCCCACAGGCCCTGTCTACTTCCCTCCTTCTCCAGAGGTGACCACTGTCCCAAGGCCACCAGCACAAGGTGCGGGTGCCGCGCCCTTCCCCTCTCTGGCCCCGCCGGTGACGCTGCTGGTGGACGGGAAGTGGCGCACCATGGTGGTCTGCCTGGTCCTCGACGTCGCACCCCCTGGTCTGGACAGCCCCGTCTGGTTCTCCGCTGGCAACGGCAGCGCCCTGGACGCCTTTACCTATGGCCCAGCCCCTGCCACCGATGGCACCTGGAGCAGCCTGGCCCAGCTGTCCCTGCCCGCCGAGGACTGGGCCGCCTGGGAGCCCCTGGTCTGCCACACGGAGCCGGGGCCCGGGGGCCCTCGCCGGAGCACGCAGCCCCTGCAGCTGTCAGGAGCAGCCTCTGCCGCCAGGACCTGCTATGGGGAGCCTCTCGGAGGCTCCCAGGCCCAGGGCCTGTGGCTGGGGGCCCTGAGACTGCTGCTGTTCAAGCTGCTGCTTCTTGATGTGTTCCTGACCTGTACCTGCCTGCCTCGGCCTCCCGCACCCACCGCCAGCTACCACCCCAGTGCCTAG

Related Sequences

XP_004846603.1 Protein

Ptcra PREDICTED: pre T-cell antigen receptor alpha isoform X2 [Heterocephalus glaber]

Length: 266 aa      View alignments
>XP_004846603.1
MRPALGGGTQSWQVPRRPPPAVLFRREEPSCRRGRTLGGDTAGGKQLGCSWQWAPPSPWAMAGMCPLLLLALGCAALPTGPVYFPPSPEVTTVPRPPAQGAGAAPFPSLAPPVTLLVDGKWRTMVVCLVLDVAPPGLDSPVWFSAGNGSALDAFTYGPAPATDGTWSSLAQLSLPAEDWAAWEPLVCHTEPGPGGPRRSTQPLQLSGAASAARTCYGEPLGGSQAQGLWLGALRLLLFKLLLLDVFLTCTCLPRPPAPTASYHPSA