Sequence details NCBI ID: XM_004846431.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Clic5
Gene Name chloride intracellular channel 5, transcript variant X2
Entrez Gene ID 101722173

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLIC5 ENSCPOG00000015161 (Guinea pig)

Gene Details

chloride intracellular channel 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013668, Guinea pig)

Protein Percentage 95.22%
CDS Percentage 92.56%
Ka/Ks Ratio 0.0595 (Ka = 0.0225, Ks = 0.3787)

CLIC5 ENSG00000112782 (Human)

Gene Details

chloride intracellular channel 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000185206, Human)

Protein Percentage 92.43%
CDS Percentage 87.52%
Ka/Ks Ratio 0.07162 (Ka = 0.0487, Ks = 0.6802)

Clic5 ENSMUSG00000023959 (Mouse)

Gene Details

chloride intracellular channel 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024755, Mouse)

Protein Percentage 94.42%
CDS Percentage 88.58%
Ka/Ks Ratio 0.0313 (Ka = 0.0253, Ks = 0.8084)

CLIC5 ENSRNOG00000047218 (Rat)

Gene Details

Chloride intracellular channel protein 5

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067890, Rat)

Protein Percentage 94.82%
CDS Percentage 88.58%
Ka/Ks Ratio 0.02838 (Ka = 0.0238, Ks = 0.838)

Genome Location

Sequence Coding sequence

Length: 759 bp    Location: 14370459..14433708   Strand: +
Raw sequence   
>XM_004846431.1
ATGACCGACAGGGCGATGGCCAACGGGGACGACAGGGACCCCGAGATCGAGCTCTTCGTGAAGGCGGGCATCGATGGAGAAAGCATCGGCAACTGTCCCTTCTCCCAGCGCCTCTTCATGATCCTCTGGCTGAAAGGAGTTGTGTTCAACGTCACCACTGTGGATCTGAAAAGAAAGCCAGCCGACCTGCACAACCTCGCCCCTGGCACCCACCCGCCCTTCCTGACCTTCAACGGGGAAGTGAAGACAGATGTCAACAAGATCGAGGAGTTCCTGGAGGAGACCTTGGCCCCCGAAAAGTATCCCAAACTGGCTTCGAAACACCGAGAGTCCAACACGGCGGGCATCGACATCTTCTCCAAGTTCTCCGCCTACATCAAGAACACCAAGCAGCAGAACAATGCGGCCCTGGAGCGGGGCCTGACCAAGGCCCTGAGGAAGCTGGATGACTACCTGAGCACCCCCCTGCCCGAGGAGATTGACATCAACACACTCGGGGACAATGACAAGGGCTCCCGGCGCAAGTTCCTGGATGGAGATGAGCTGACCCTGGCAGACTGCAACCTGCTGCCCAAGCTCCATGTGGTCAAGATCGTGGCCAAGAAATACCGCAACTATGACTTCCCTGCTGAGATGACAGGGCTGTGGCGGTACCTCAAGAACGCCTACGCCCGGGACGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGCTGGCCTATGCCGACGTCGCCAAGCGTCTCAGCAGGTCCTGA

Related Sequences

XP_004846488.1 Protein

Clic5 PREDICTED: chloride intracellular channel protein 5 isoform X2 [Heterocephalus glaber]

Length: 252 aa      View alignments
>XP_004846488.1
MTDRAMANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGEVKTDVNKIEEFLEETLAPEKYPKLASKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALRKLDDYLSTPLPEEIDINTLGDNDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDFPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLSRS