Sequence details NCBI ID: XM_004846386.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Zmiz1
Gene Name zinc finger, MIZ-type containing 1, transcript variant X4
Entrez Gene ID 101707333

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZMIZ1 ENSCPOG00000002268 (Guinea pig)

Gene Details

zinc finger, MIZ-type containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002059, Guinea pig)

Protein Percentage 98.97%
CDS Percentage 95.04%
Ka/Ks Ratio 0.01924 (Ka = 0.0046, Ks = 0.238)

ZMIZ1 ENSG00000108175 (Human)

Gene Details

zinc finger, MIZ-type containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000334474, Human)

Protein Percentage 98.59%
CDS Percentage 93.38%
Ka/Ks Ratio 0.01816 (Ka = 0.0065, Ks = 0.3595)

Zmiz1 ENSMUSG00000007817 (Mouse)

Gene Details

zinc finger, MIZ-type containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000124863, Mouse)

Protein Percentage 98.03%
CDS Percentage 91.11%
Ka/Ks Ratio 0.02066 (Ka = 0.0101, Ks = 0.4866)

Zmiz1 ENSRNOG00000010488 (Rat)

Gene Details

zinc finger, MIZ-type containing 1 (Zmiz1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014003, Rat)

Protein Percentage 98.12%
CDS Percentage 91.02%
Ka/Ks Ratio 0.01888 (Ka = 0.0093, Ks = 0.4913)

Genome Location

Sequence Coding sequence

Length: 3213 bp    Location: 12145570..12299050   Strand: +
Raw sequence   
>XM_004846386.1
ATGAATTCTATGGACAGGCACATCCAGCAGACCAACGACCGACTGCAGTGTATCAAGCAGCATTTACAGAATCCCGCCAACTTCCACAATGCCGCCACGGAGCTGCTGGACTGGTGTGGGGACCCGCGCGCATTCCAGCGGCCCTTCGAGCAGAGCCTGATGGGCTGCCTCACGGTGGTCAGTCGGGTGGCAGCCCAGCAAGGCTTTGACCTGGACCTCGGCTACAGACTGCTGGCTGTGTGTGCTGCGAACCGAGACAAGTTCACTCCCAAGTCTGCTGCGCTGCTGTCCTCCTGGTGTGAGGAACTCGGCCGCCTGCTGCTGCTGCGACATCAGAAGAGCCGCCAGAGCGACCCCCCTGGGAAACTCCCCATGCAGCCCCCCCTCAATTCCATGAGCTCCATGAAACCCACTCTGTCGCACAGTGATGGGTCGTTCCCCTATGACTCTGTCCCTTGGCAGCAGAATACCAACCAGCCTCCCGGCTCCCTCTCTGTGGTCACCACGGTTTGGGGAGTGACCAACACATCCCAGAGCCAGGTCCTCGGGAACCCTATGGCCAATGCCAACAATCCTATGAATCCAGGCGGCAACCCCATGGCGTCGGGCATGACCACCAGCAACCCCGGCCTCAATTCTCCGCAGTTCGCTGGACAGCAGCAGCAGTTCTCAACCAAGGCTGGCCCAGCGCAGCCCTACATCCAGCAGGGCATGTATGGTCGGCCCAACTACCCTGGCAGCGGGGGCTTCGGGGCCAGTTACCCTGGGGGTCCGAACGCGCCCGCAGGCATGGGCATCCCTCCGCACACCAGGCCGCCTGCAGACTTCACTCAGCCTGCAGCCGCCGCCGCAGCAGCTGCAGTAGCAGCAGCGGCAGCCACCGCCACAGCCACAGCCACGGCCACCGTGGCAGCCCTGCAGGAGACGCAGAACAAGGACATAAACCAGTATGGACCGATGGGTCCCACCCAGGCGTATAACAGCCAATTCATGAACCAGCCCGGGCCGAGGGGCCCTGCCTCCATGGCGGGCAGCATGAACCCCGCCAACATGGCGGCTGGCATGACGCCCTCGGGGATGAGCGGCCCTCCCATGGGCATGAACCAGCCCCGGCCGCCTGGCATCAGCCCCTTTGGCACACACGGGCAGCGGATGCCCCAGCAGACTTACCCGGGCCCCCGGCCCCAGTCCCTTCCTATCCAGAGCATAAAGAGGCCGTACCCGGGAGAGCCCAGCTATGGAAACCAGCAATACGGACCAAACAGCCAGTTCCCCACCCAGCCAGGCCAGTACCCCACCCCGAACCCCCCAAGGCCGCTCACATCTCCAAACTATCCCGGGCAAAGGATGCCAAGCCAACCCAGCACCGGGCAGTACCCGCCCCCCACGGTCAACATGGGGCAGTATTACAAGCCAGAGCAGTTTAATGGACAAAGCAACACCTTCTCGGGCAGCAGCTACAGCAACTACAGCCAGGGCGGTGTCAACAGGCCTCCCAGGCCGGTTCCTGTGGCCAATTACCCCCACTCACCTGTTCCAGGGAACCCCACGCCTCCCATGACCCCTGGGAGCAGCATCCCCCCCTACCTGTCCCCCAGCCAAGATGTCAAACCACCCTTCCCGCCCGACATCAAGCCAAATATGAGCGCTCTGCCACCACCCCCAGCCAACCACAATGACGAGCTGAGGCTCACATTCCCCGTGCGGGATGGCGTGGTGCTGGAGCCCTTCCGCCTGGAGCACAACTTGGCCGTCAGCAACCACGTGTTTCATCTGCGGCCCACGGTGCACCAGACACTGATGTGGAGGTCTGACCTGGAGCTGCAGTTCAAGTGCTATCACCATGAGGACCGGCAGATGAACACCAATTGGCCGGCCTCGGTGCAGGTCAGCGTCAATGCGACGCCCCTCACCATCGAGCGCGGGGACAACAAGACCTCCCACAAGCCGCTGCACCTCAAGCACGTGTGCCAGCCGGGCCGCAACACCATCCAGATCACGGTTACTGCCTGCTGCTGCTCACACTTGTTCGTGCTGCAGCTGGTGCACCGGCCCTCTGTGCGCTCGGTGCTGCAGGGCCTGCTGAAGAAGCGCCTCCTGCCGGCAGAGCACTGCATCACAAAAATCAAGCGGAACTTCAGCAGCGTGGCAGCCTCGTCGGGCAACACAACCCTGAACGGGGAGGATGGCGTGGAGCAGACGGCCATCAAGGTGTCCCTGAAGTGCCCCATCACATTCCGGCGTATCCAGCTGCCTGCTCGAGGCCATGATTGCAAGCATGTCCAGTGCTTTGACCTGGAGTCGTACTTGCAGCTGAATTGCGAGAGAGGGACCTGGAGGTGTCCTGTGTGCAATAAAACTGCTCTGCTGGAGGGGCTGGAGGTAGATCAGTACATGTGGGGGATCCTGAACGCCATCCAACACTCCGAGTTTGAAGAGGTCACCATCGACCCCACATGCAGCTGGCGGCCAGTGCCCATCAAGTCGGACCTGCACATCAAGGATGACCCTGATGGCATCCCCTCCAAGCGGTTCAAGACCATGAGCCCCAGCCAGATGATCATGCCCAACGTCATGGAGATGATTGCAGCCCTGGGCCCCGGCCCATCCCCGTACCCGCTCCCGCCTCCCCCCGGGGGCACGAACTCCAGTGACTACAGCAGCCAAGGCAACAACTACCAGGGCCATGGCAACTTTGACTTCCCCCATGGGAACCCCAGCGGGACGTCCATGAATGACTTCATGCACGGGCCTCCCCAGCTCTCCCACCCCCCAGACATGCCCAACACCATGGCCGCCCTCGAGAAGCCCCTCAGTCACCCCATGCAGGAAACTATGCCCCACGCTGGCAGTTCTGACCAGCCCCATCCCTCCATACAACAAGGTTTGCACGTACCACACCCCAGCAGCCAGTCAGGGCCTCCATTACATCACAGTGGGGCTCCTCCTCCTCCTCCTCCTCCTCCTTCCCAGCCTCCCCGGCAGCCGCCACAGGCCGCTCCCAGCAACCATCCACACAGCGACCTGACCTTTAACCCCTCCTCAGCCTTAGAGGGTCAGGCCGGAGCGCAGGGAGCGTCCGACATGCCGGAGCCTTCACTGGATCTCCTGCCAGAACTCACCAATCCTGATGAGCTCCTTTCCTACCTGGACCCCCCTGACCTTCCGAGCAATAGCAATGACGACCTCCTATCTCTCTTTGAGAACAACTGA

Related Sequences

XP_004846443.1 Protein

Zmiz1 PREDICTED: zinc finger MIZ domain-containing protein 1 isoform X4 [Heterocephalus glaber]

Length: 1070 aa      View alignments
>XP_004846443.1
MNSMDRHIQQTNDRLQCIKQHLQNPANFHNAATELLDWCGDPRAFQRPFEQSLMGCLTVVSRVAAQQGFDLDLGYRLLAVCAANRDKFTPKSAALLSSWCEELGRLLLLRHQKSRQSDPPGKLPMQPPLNSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSTKAGPAQPYIQQGMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMAGSMNPANMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQSIKRPYPGEPSYGNQQYGPNSQFPTQPGQYPTPNPPRPLTSPNYPGQRMPSQPSTGQYPPPTVNMGQYYKPEQFNGQSNTFSGSSYSNYSQGGVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPANHNDELRLTFPVRDGVVLEPFRLEHNLAVSNHVFHLRPTVHQTLMWRSDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLHLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSVAASSGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPVPIKSDLHIKDDPDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSSDYSSQGNNYQGHGNFDFPHGNPSGTSMNDFMHGPPQLSHPPDMPNTMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPPPPSQPPRQPPQAAPSNHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLPELTNPDELLSYLDPPDLPSNSNDDLLSLFENN