Sequence details NCBI ID: XM_004846287.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sec24c
Gene Name SEC24 family, member C (S. cerevisiae), transcript variant X2
Entrez Gene ID 101710672

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEC24C ENSCPOG00000003394 (Guinea pig)

Gene Details

SEC24 family, member C (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003068, Guinea pig)

Protein Percentage 94.97%
CDS Percentage 94.42%
Ka/Ks Ratio 0.18375 (Ka = 0.0259, Ks = 0.1409)

SEC24C ENSG00000176986 (Human)

Gene Details

SEC24 family, member C (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000343405, Human)

Protein Percentage 93.41%
CDS Percentage 91.77%
Ka/Ks Ratio 0.13951 (Ka = 0.0336, Ks = 0.2407)

Sec24c ENSMUSG00000039367 (Mouse)

Gene Details

Sec24 related gene family, member C (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045955, Mouse)

Protein Percentage 92.78%
CDS Percentage 89.82%
Ka/Ks Ratio 0.11871 (Ka = 0.0387, Ks = 0.326)

Genome Location

Sequence Coding sequence

Length: 3288 bp    Location: 7261511..7288869   Strand: +
Raw sequence   
>XM_004846287.1
ATGAATGTTAACCAGTCAGCTCCACCTGTGCCGCCATTTGGGCAGCCTCAGCCCATCTACCCAGGGTATCATCAGTCCAGTTATGGTGGGCAGCCAGGGTCCACAGCACTTCCAACTCCCTATGGCGCCTACAATGGTCCAGTGCCAGGCTATCAGCAAACACCTCCTCTTGGTATGTCAAGAGCCCCACCCTCCTCAGGGGCCCCTCCAACCTCGACAGCACAGGCTTCTTGTGGCCAAGCTGGGTATGGCCAGTTTGGCCAAGGTGATATACAGAATGGACCCAGCTCTTCCACTGTTCCCACGCCAAGGCTCCCTGGGTCTCAGCCATTTGGATCCCCATTGGCTCCTGCAGTCAGCCAGCCAGCTGTGCTTCAGCCCTATGGCCCTCCCCCGACAAGTGCACAGGTGACTGCCCAGCTGGCCGGAATGCAGATCAGTGGTGCTATGGCCCCAGCTCCTCCCCCTTCAGGGCTGGGCTATGGACCACCAACATCGCTGGCCTCAGCCTCAGGAAGTTTCCCTAACTCCGGTCCATATGGCTCCTATCCTCAGGGCCAGGCTCCTCCCATTAGCCAGACCCAAGGTCATCCTGGGGTTCAGCCTCCCCAGCGGTCTGCACCCCCACTGGCCTCCAGCTTCAAACCCCCAGCTTCAGGGGGTCCTCGGATGCCTTCGATGACTGGTCCACTTCCACCTGGACAGGGTTTTGGGGGTGTCCCCATAAGCCACCCCAACCATGTGTCCTCACCTCTTCCTCAAGCTCTGCCCCCAGGCACCCAGATGACTGGGCCCCAAGGACCACTGCCACCTATGCACTCCCCCCAGCAGCCGGGTTATCAACTGCAACAAAATGGTTCCTTTGGACCAGGCCGGGGCCCACAGCCCAATTATGGAAGCCCCTACCCTGGGGCACCCACTTTTGGCAGTCAGCCTGGGCCTCCTCAGCCACTGCCTCCTAAGCGCCTGGACCCTGATGCCATCCCCAGCCCTATTCAGGTCATTGAAGATGATAGGAACAACCGGGCTTCAGAGCCATTTGTTACTGGTATACGGGGCCAGGTGCCACCCTTAGTCACCACCAACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGCACATCCTATAACATCCCTTGCACGTCTGACATGGCTAAGCAGGCTCAGGTGCCCCTGGCAGCTGTCATCAAGCCCCTGGCAAGGCTGCCCCAAGAGGAGGCTTCACCGTATGTCGTAGACCATGGGGAATCTGGCCCCTTGCGCTGCAATCGCTGCAAAGCATACATGTGCCCTTTCATGCAGTTCATCGAGGGAGGGAGGCGCTTCCAGTGCTGCTTTTGCAGCTGTATCAATGATGTTCCTCCCCAGTATTTCCAACATCTGGATCACACCGGCAGACGTGTGGATGCTTATGACCGTCCTGAGCTATCCCTGGGCTCTTATGAATTCTTGGCCACTGTAGATTACTGCAAGAACAATAAGTTACCCAGCCCTCCTGCCTTCATCTTCATGATTGACGTCTCATACAATGCCATCAGAACTGGTCTCGTTAGGCTCCTCTGTGAGGAGCTTAAGTCACTGTTAGACTACCTACCTAGGGAGGGGGCAGAAGAATCAGCAATCCATGTTGGCTTTGTCACCTACAATAAGGTGCTCCACTTCTACAATGTGAAGAGCTCATTGGCCCAGCCACAGATGATGGTTGTATCTGATGTGGCTGACATGTTTGTGCCACTGCTGGATGGCTTTCTGGTCAATGTCAGTGAGTCTCGGGCAGTCATCACCAGCCTACTGGATCAGATTCCAGAAATATTCGCAGACACAAGGGAAACAGAGACAGTATTTGCACCAGTTATCCAGGCTGGGATGGAGGCCCTGAAGGCTGCCGAGTGTGCAGGAAAGCTGTTTCTGTTCCACACGTCCTTGCCCATTGCAGAGGCCCCAGGGAAGCTGAAGAACAGAGATGACAGGAAGCTCATCAACACAGACAAAGAGAAGACTTTGTTCCAGCCTCAGACAGGTGTGTATCAGACTCTGGCCAAAGAGTGTGTGGCCCAAGGCTGCTGTGTTGACCTCTTCCTCTTCCCTAACCAATATGTGGATGTGGCCACGCTCTCACTTGTGCCCCAACTCACTGGTGGCTCTGTCTACAAATATGCTTGTTTTCAGGTGGAGAATGACCAGGAACGGTTCCTGAGTGACCTTCGTCGTGATGTACAGAAGGTTGTTGGCTTTGATGCTGTGATGAGGGTCCGCACGAGCACCGGTATCCGTGCCATAGACTTTTTTGGTGGTTTCTACATGAGCAACACAACAGATGTGGAGCTGGCGGGCCTGGATGGGGACAAGACAGTGACTGTGGAGTTCAAGCATGATGATCGACTTAATGAAGAGAGTGGAGCCCTCCTGCAGTGTGCCCTGCTTTATACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCACAACCTGGCCCTGAACTGCTGCACCCAGCTGGCTGATCTGTATCGGAACTGTGAGACTGACACACTCATCAACTACATGGCCAAGTTTGCATACCGGGGTGTCCTGAATAGCCCCATAAAGACTGTGCGTGACACTCTCATCACCCAGTGTGCCCAGATCCTTGCCTGTTACAGAAAGAACTGTGCCAGCCCCTCTTCTGCAGGACAGTTGATCCTTCCTGAGTGCATGAAGCTACTTCCAGTTTACCTGAACTGTGTGTTGAAGAGTGACGTCCTGCAGCCTGGAGCTGAGGTCACTACTGACGATCGTGCCTATGTTCGACAGCTGGTTACTTCCATGGATGTGGCTGAGACTAATGTCTTCTTCTACCCTCGGCTTCTACCACTGACCAAGTCTCCCATTGAGAGTACCACTGAACTACCAGCAGTTCGAGCATCTGAAGAGCGTCTAAGCAGTGGTGATATATATTTACTGGAGAATGGGCTCAACCTCTTCCTCTGGGTGGGAGCAAGTGTCCAACAAGGTGTCGTCCAGAGCCTTTTCAGCGTTGCTTCCTTCAGTCAGATCACCAGTGGCTTGAGTGTCCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGTCTCATTGATAGCTTAAGGGCACAGAGAGCACGGTACATGAAGCTTATTGTGGTGAAACAGGAAGACAAGCTGGAGATGCTGTTCAAGAACTTCCTGGTGGAAGACAAGAGCCTGAGTGGGGGAGAATCCTATGTGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAA

Related Sequences

XP_004846344.1 Protein

Sec24c PREDICTED: protein transport protein Sec24C isoform X2 [Heterocephalus glaber]

Length: 1095 aa      
>XP_004846344.1
MNVNQSAPPVPPFGQPQPIYPGYHQSSYGGQPGSTALPTPYGAYNGPVPGYQQTPPLGMSRAPPSSGAPPTSTAQASCGQAGYGQFGQGDIQNGPSSSTVPTPRLPGSQPFGSPLAPAVSQPAVLQPYGPPPTSAQVTAQLAGMQISGAMAPAPPPSGLGYGPPTSLASASGSFPNSGPYGSYPQGQAPPISQTQGHPGVQPPQRSAPPLASSFKPPASGGPRMPSMTGPLPPGQGFGGVPISHPNHVSSPLPQALPPGTQMTGPQGPLPPMHSPQQPGYQLQQNGSFGPGRGPQPNYGSPYPGAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRASEPFVTGIRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPQEEASPYVVDHGESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGRRVDAYDRPELSLGSYEFLATVDYCKNNKLPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDYLPREGAEESAIHVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVSESRAVITSLLDQIPEIFADTRETETVFAPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGVYQTLAKECVAQGCCVDLFLFPNQYVDVATLSLVPQLTGGSVYKYACFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAIDFFGGFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLNSPIKTVRDTLITQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVAETNVFFYPRLLPLTKSPIESTTELPAVRASEERLSSGDIYLLENGLNLFLWVGASVQQGVVQSLFSVASFSQITSGLSVLPVLDNPLSKKVRGLIDSLRAQRARYMKLIVVKQEDKLEMLFKNFLVEDKSLSGGESYVDFLCHMHKEIRQLLS