Details from NCBI annotation

Gene Symbol Synpo2l
Gene Name synaptopodin 2-like, transcript variant X1
Entrez Gene ID 101709365

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYNPO2L ENSCPOG00000022018 (Guinea pig)

Gene Details

synaptopodin 2-like

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015952, Guinea pig)

Protein Percentage 92.73%
CDS Percentage 91.27%
Ka/Ks Ratio 0.18023 (Ka = 0.0407, Ks = 0.226)

SYNPO2L ENSG00000166317 (Human)

Gene Details

synaptopodin 2-like

External Links

Gene Match (Ensembl Protein ID: ENSP00000378289, Human)

Protein Percentage 90.63%
CDS Percentage 88.5%
Ka/Ks Ratio 0.17887 (Ka = 0.0562, Ks = 0.3144)

Synpo2l ENSMUSG00000039376 (Mouse)

Gene Details

synaptopodin 2-like

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000053176, Mouse)

Protein Percentage 87.06%
CDS Percentage 84.61%
Ka/Ks Ratio 0.16984 (Ka = 0.0797, Ks = 0.4693)

Synpo2l ENSRNOG00000008949 (Rat)

Gene Details

Protein Synpo2l

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011956, Rat)

Protein Percentage 86.67%
CDS Percentage 84.23%
Ka/Ks Ratio 0.16517 (Ka = 0.0806, Ks = 0.4878)

Genome Location

Sequence Coding sequence

Length: 2943 bp    Location: 7255885..7246425   Strand: -
>XM_004846282.1
ATGGGTGCTGAGGAGGAAGTCCTGGTCACACTATCAGGGGGAGCCCCCTGGGGCTTCCGACTTCAGGGGGGGGCCGAACAGAGGAAACCCTTACAGGTGTCCAAGATCCGAAGAAGGAGCCAGGCTGGCAGAGCAGGACTCCGAGAGAGGGACCACCTCTTGGCGATCAATGGGGTTTCTTGTACCAGCCTCTCTCATGCCAGTGCCATGAGCCTCATCGATGCCTCAGGGAATCAGCTTGTCCTCACTGTGTGGCGGGCAGCAGAGGAAGGGCCTGTGAGATCTTCATCCCCTGGGGAGCTTCAGGCACTGTCACCCCTATCTCCACTGAGTCCTGAGCCTCCTGGTGCTCCGGTATCCCAGCCCCTTCAGCCTGGGAGCCTTCGATCACCCCCTGACAGTGAGGCTTACTATGGAGAGACAGACAGTGATGTGGATGGCTCTGCCACTCAGGAGAAGCCCCGCCGACCCCGCCGCCGAGGCCCCACAAGGCCCACACCTCCAGGAGCCCCACCAGATGAGGTCTACCTGTCTGACAGCCCTGCAGAGCCAGCACCTGCCATCCCTGGGCCTCCCAGCCAGGCTGACAGCCGTGTGAGCTCCCCATCTTGGGAGGAAGGAGCAGCCCTTCAGCCGCTCCCGGCCGAGGCACTGCTGTTACCCCATGGTCCACTCCGGCCTGGTCCTAATCTCATCCCTATGGTGGGACCTGTTCCCCACCCAGTGGCAGAAGATCTTACTACTACCTACACCCAGAAGGCCAAGCAAGCCAAACTGCAACGGGCAGAGAGCCTCCAAGAGAAGAGTGTAAAGGAAGCAAAGACCAAATGCAGGACCATTGCATCCCTGTTAACTGCAGCCCCCAACCCCCACTCCAAGGGTGTGCTTATGTTTAAGAAACGGCGGCAGAGAGCTAAGAAGTACACCCTAGTGAGCTTCGGGGCTGCAGCTGGGACAGGCACCGAGGAGGAGGACGGAGTTCCCCCAACGAGTGAGTCCGAGTTGGACGAAGAGGGCTTTTCCGACGCGCGCAGCCTCACCAATCAGTCTGACTGGGACAGCCCCTATCTGGACATGGAGCTGGCCAGGGTGGGCTCGGGCACAGCAGAGGGCCAGGGCGGGCAACTGAGCGAGGTCTCCGGGCGAGGAGTCCAGCTCTTTGAACAGCAGCGCCAGCGCGCAGCCTCCAGCACCCACGAGTCGGCTCCGGTGGGCCAGGCAGTGGTGCTCAATGGTCAGGGTCTGCAGTCACCACCCCGAGCCCAAAGTGCTCCCCCGGAGGCAGCTGTGCTCCCACCCAGTCCTTTGCCGGCCCCTCTAGCCAGCCCCACACCGTTCCTCCCAGGTGGTGGAGCCCCTTCCCCAGCTCTGAGCGTATTTAACAGGTCAGCTAGACCCTTCACCCCGGGCTTACAAGGGCAGCGGCCAGGTACCACCTCGGTGATTTTCAGACCTCTAGCCCCCAAGAGGGCGAACGAGAACCTCGGGGGCCTCGGCCCGGCTCCAGCCCCCTTCGTGTCCGCCCCACCCCCCTTCGTGTTCTCTCCGCAGGAGCCCACGCCTCTGCAGAGCTTCACCACAGGGGTTTCCAGCCATGTGCCTTCCCCTAGTTCCCCCAGCACCCCGCGGTCCTCAGGCCCTGTTACGGCCACCAGCTCCCTGTTCATCCCAGCCCCGAGTCGCCCCGTTACTCCGGGCGGAGCCCCAGAGCCCTCCGCTCCTCCTGGTGCAGCTGCCATGACCTCCACCGCCTCTATCTTTCTCTCGTCGCCCCTGCGACCCTCTGCGCCCCCCGAGGCGCCTGCTCCAGACCCCGCGGCCCCCGACCCCCCCAGCGCTCGCGAGCAGCGCATCTCTGTGCCAGCTGCGCGCACTGGCATCCTGCAGGAGGCCCGTCGCCGCGGGACCAGGAAGCAGATGTTCCGTCAGGGAAAGGAGGAGCCCAAGAACTCGCCCAACCCCGAGTTGCTGTCGCTAGTGCAGAACCTAGATGAAAAACCTCGGGCCGGGGTTGCTGAGTCTGGTCCAGAGGAGGACGCTTTGAGCCTCGGAGCTGAAGCTTGCAATTTCATGCAGCCACCAGGGGGCAGGAGTTACAAGACGCTGCCTCGCGCGACACCTAAAACCCCGCCTCCAATGGCTCCCAAGACCCCGACCCCTATGGCTCCTAAGACTCCACCCCCAGTGGCTCCTAAACCAGCATCCCGAGGGCTCCTTGATGGGGTAGTGAATGGGGCGACCCCTTCGCCTGGAATCCCTGAGCCGCCAAGGCTGCAGGGGAGGGGTGGGGAGCTGTTTGCCAAGCGGCAGAGCCGTGCCGACAGGTATGTGGTGGAAACGACACCGGGTCCTGGCCCTCGGCCCAGAAGTCCTTCTCCTACCCCCTCACTGCCCCCTTCCTGGAAATATTCACCCAACATCCGAGCCCCACCTCCAATTGCTTACAACCCACTACTCTCACCCTTTTTCCCCCAGGCTGCCCGAACCCTCCCTAACAAGGCCCAATCCCAAGGGCCTCGGGCAGCCCCCAAGCAGGGCATCAAGGCTCTGGATTTCATGCGACATCAACCCTACCAACTCAAAACGGCCATGTTCTGTTTTGACGAGGTTCCTCCAACTCCTGGCCCCGCCTCCTCAGGGCCCCCCCAAACTGCCCGAGTCCAGGAGATCCGTCGATTTTCCACTCCAGCGCCCCAGCCCACGGCAGAGCCCCTAGCTCCCACTGTACTTGCCCCCCGAGCAGCCACCTCACTGGATGAACCCATCTGGAGGGCAGAACTGGCCTCAGCCCCTGTCTCCAGCCCTGCCCCTCCTCAAGAGTCTCCCAGAGGCTTTGGGGCCATCCCCAGCTCCTGTGGTTTCCAGGTAGCCAGGCCCCGATTCTCAGCCACCAGAACAGGATTACAGGCTCATGTGTGGAGGCCTGGGGCAGGGCACCGGTGA

Related Sequences

XP_004846339.1 Protein

Synpo2l PREDICTED: synaptopodin 2-like protein isoform X1 [Heterocephalus glaber]

Length: 980 aa      View alignments
>XP_004846339.1
MGAEEEVLVTLSGGAPWGFRLQGGAEQRKPLQVSKIRRRSQAGRAGLRERDHLLAINGVSCTSLSHASAMSLIDASGNQLVLTVWRAAEEGPVRSSSPGELQALSPLSPLSPEPPGAPVSQPLQPGSLRSPPDSEAYYGETDSDVDGSATQEKPRRPRRRGPTRPTPPGAPPDEVYLSDSPAEPAPAIPGPPSQADSRVSSPSWEEGAALQPLPAEALLLPHGPLRPGPNLIPMVGPVPHPVAEDLTTTYTQKAKQAKLQRAESLQEKSVKEAKTKCRTIASLLTAAPNPHSKGVLMFKKRRQRAKKYTLVSFGAAAGTGTEEEDGVPPTSESELDEEGFSDARSLTNQSDWDSPYLDMELARVGSGTAEGQGGQLSEVSGRGVQLFEQQRQRAASSTHESAPVGQAVVLNGQGLQSPPRAQSAPPEAAVLPPSPLPAPLASPTPFLPGGGAPSPALSVFNRSARPFTPGLQGQRPGTTSVIFRPLAPKRANENLGGLGPAPAPFVSAPPPFVFSPQEPTPLQSFTTGVSSHVPSPSSPSTPRSSGPVTATSSLFIPAPSRPVTPGGAPEPSAPPGAAAMTSTASIFLSSPLRPSAPPEAPAPDPAAPDPPSAREQRISVPAARTGILQEARRRGTRKQMFRQGKEEPKNSPNPELLSLVQNLDEKPRAGVAESGPEEDALSLGAEACNFMQPPGGRSYKTLPRATPKTPPPMAPKTPTPMAPKTPPPVAPKPASRGLLDGVVNGATPSPGIPEPPRLQGRGGELFAKRQSRADRYVVETTPGPGPRPRSPSPTPSLPPSWKYSPNIRAPPPIAYNPLLSPFFPQAARTLPNKAQSQGPRAAPKQGIKALDFMRHQPYQLKTAMFCFDEVPPTPGPASSGPPQTARVQEIRRFSTPAPQPTAEPLAPTVLAPRAATSLDEPIWRAELASAPVSSPAPPQESPRGFGAIPSSCGFQVARPRFSATRTGLQAHVWRPGAGHR