Gene Symbol | unclassified transcription discrepancy |
---|---|
Gene Name | mRNA |
Entrez Gene ID | 101708994 |
For more information consult the page for NW_004624754.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Protein Percentage | 90.93% |
---|---|
CDS Percentage | 92.92% |
Ka/Ks Ratio | 0.29381 (Ka = 0.0466, Ks = 0.1586) |
ubiquitin specific peptidase 54
Protein Percentage | 85.6% |
---|---|
CDS Percentage | 89.53% |
Ka/Ks Ratio | 0.36115 (Ka = 0.0786, Ks = 0.2177) |
ubiquitin specific peptidase 54
Protein Percentage | 79.52% |
---|---|
CDS Percentage | 84.34% |
Ka/Ks Ratio | 0.30962 (Ka = 0.1166, Ks = 0.3766) |
ubiquitin specific peptidase 54 (Usp54), mRNA
Protein Percentage | 78.89% |
---|---|
CDS Percentage | 83.67% |
Ka/Ks Ratio | 0.29145 (Ka = 0.1195, Ks = 0.4098) |
>XM_004846281.1 ATGTCTTGGAAGAGAAATTATTTTTCAGGGGGCCGTGGTAGTGTTCAAGGGATGTTTGCTCCTCGAAGCTCAACCTCCATAGCCCCAAGCAAAGGCCTCAGCAATGAGCCAGGGCAAAACAGCTGCTTCCTCAACAGTGCGCTGCAGGTTTTGTGGCACTTGGACATCTTCCGACGTAGCTTTAGGCAGCTCACAACTCACAAGTGCATGGGAGATTCCTGCATCTTTTGTGCTCTCAAGGGAATCTTTAACCAGTTTCAGTGCAGTAGTGAAAAAGTCCTTCCATCTGACACTCTCCGCAGCGCTCTGGCAAAGACTTTTCAGGATGAGCAGCGTTTCCAGCTGGGAATTATGGATGATGCTGCAGAGTGCTTTGAAAATCTCCTCATGAGAATTCACTTCCACATTGCTGATGAAACCAAAGAAGATATATGTACTGCCCAACACTGCGTTTCCCACCAGAAATTTGCAATGACGTTGTTTGAGCAGTGTGTGTGTACTAGCTGTGGCGCTACTTCTGATCCACTGCCTTTCATCCAGATGGTACATTACATCTCCACCACTTCCCTTTGCAATCAGGCTATTTGTATGCTGGAAAGGCGAGAAAAACCTTCGCCAAGCATGTTTGGTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGAACTGTCCTAGCAACTGTGGAGAGAGGATCCGGATTCGCCGTGTGCTGATGAATGCTCCACAGATTATCACAATCGGCCTGGTATGGGACTCTGACCATTCAGACTTGGCAGAAGATGTCATCCACAGTCTTGGGACCTGCCTTAAGCTGGGTGATCTGTTTTTCAGAGTGACAGATGACCGGGCCAAACAGTCTGAACTGTATTTAGTAGGAATGATCTGTTACTATGGCAAACATTATTCTACATTCTTTTTTCAAACAAAGATCCGCAAATGGATGTATTTTGATGATGCTCATGTTAAGGAGATTGGCCCCAAATGGAAGGATGTGGTGACCAAATGCATCAAGGGGCATTACCAGCCCTTGCTGCTGCTTTATGCAGATCCCCAAGGTACCCCAGTGTCTACCCAGGACCTGCCTCCCCAAGCTCAGTTCCAGCCATACAGCAGGACATGCTATGATAGTGAAGATTCAGGACACCTGACTGATAGTGAATGTAATCAGAAACACACATCCAAGAAAGGGTCCCTGATAGAGCGCAAGAGGAGTTCTGGACGTGTTAAGAGGAAAGGTGATGAGCCACAGGCCTCTGGCTACCACAGTGAAGGAGAAACACTGAAAGAGAAGCAGGCTCCTAGGAATGCATCCAAACCATCCAGCAGCACCAACAGACTAAAGGATTTTAAAGAGACAGTCAGCAATATGATACATAACAGACCATCCCTGGCTTCTCAGACCAATGTAGCATCTCCCCGTGTGGGGAAGGGAGGAGACCAGCCTGACAAAAAACCTCCTAAGAGCCTGCCTTTAAACTCTCGTGACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAATCTAGTTCTTCGAGCAAGTATCGTCCAACATGGAGACCAAAACGAGAGTCTCTAAATATTGACAGTATTTTTAGTAAGGACAGAAGGAAGCATTGTGGCTATACCCAGCTAAGCCCCTTTTCTGAGGATTCAGCTAAAGACTTTACATCAGATGAACTAAGCAAGCCTCCTACTTATGACATTAAAGCTGGTGGACCAAGCCCCCGGTACAAGCCTTGGGGGCCAGCACGCCCAGGCTCCCAACTTTTAGAGCAGCACCCTCGCCTAATCCAGAGAATGGAATCTGGCTATGAGAGCAGTGAGAGGAACAGCAGCAGTCCCGTCAGCCTGGATGTCACCCTCTCTGAGAGCTCAAATACCTGCAGGGATCCAAGTGCAAAGAGATCAGGGGGATTTGTCCCTTCTTGGCATCATATCCCAAAGTCTCACAGCAGTAGCATCCTAGAAGTGGACTCCACAGCATCAATGAGTAGCTGGACAAAGACTCAACCCCTCTTGGGTGGGGAGATAACGTCTAAAAGTGAACTGGATGAATTGCAGGAAGAGGTGACCAGGAGGGCCCAGGAACAGGAACTTCGAAGAAAACGGGAGAAGGAATTAGAAGCTGCTAAAGGGTTTAACCCTCATCCCAGCCGCTTCATGGACTTAGATGAACTGCAGAATCAGGGGAGGAGTGACGGCTTTGAGAGGTCCCTGCAAGAGGCAAATTCAGTGTTTGAAGAGTCGCTGCATCTGGAACAAAAGGGAGACTGTGCTGCAGCTTTGGCTCTTTGTAACGAAGCTATCTCTAAACTAAGACTTGCCCTGCATGGTGCCAGCTCTAGCACGCACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAGCAGCAGCAGCAATCATCCCAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCATCACAAGGGGGGGCCCTCCCTCAGCCAACAAGTGAACAGCCTATCCCGCTCCAAGTACTGTTAAGTCAGGACACCCACCTGGAACCCTGCACAGATACAGAGTTTGGGGCCAGTTCTTACTTCCACTCACCTGCTTCCTGCCATGAGTCACACTCATCACTGTTCCCAGAGTCACCTGCTCCATCTGCCCCACAGCACAATTCCCCTAGTAGATCTCCCTTGAAGCTTCTGACTTCAGTTGAGGTGGACAGCATTGACTCCTCTGAATTCCACTGGCAAAGTGTACCTAAAACACCAGGGAAGACTGAGAATTCTCAGTATGATTGTATGCCACTGGATGCCCTAGAGGGTAAGCTGCAAGGTCACAGGGATGACAACAGCTGCAGGAGGTTCCCTCCACAAGAAGGGAGGGGCAGTACTCAAGAACAGTTCCAAGAAAAAAGGGATCCTGCTGACCCATGCCTTACGATGCTTTGGTCACATCAAACAGGAAGACCTATCTCTGAGAGAGGAGATCCACAGAGTCTCGGCTCTAGTCTTTCAAGTTCATCAGCTCAGCCCAGCTTTCCCCTGTGTAGGGCTTGCCACCCCATAATGCCTGCTGCTTCTTTATCTGTGCATCACTCTCCTGATCCTGTGGAGAAAACTAACCAATGCCTCCAAGCCCAAAGCCTTCAAAATTCATTGACTTCAAAAGTGGACAGAGGCAGTGAAGAACTCGACAGGCCAGAGTTTCCCAGCACAAAGGGACTTGTCCACTCTCTGGCAGAACAGTTCCAGAGGATGCAGGGTGTCTCCATGAGGGATGCCACAGATTTCCAGGATAAAAGTTTGCCAAATAGTCTAAGGAAGAACTGTTTCCCTTCTGACTGTCAGCCTCCTCTTCCACAAGGTCAAGAAAAAGGCCACTGTCATTGGGCAAAACAGCAACCATGCCTAGATGGTAGAGACAGACTGCCTTCCTGGGAGGAGCCTGCTGACCATGCTTCTCTTGCCATGGATTCTGAGTTGCCTAATGGTGTAACTTCTAGGGGAGGACAGCCCAGGTTGGCAGAGCCAGGTGTGTACCAAGGAAAGCTGTCCCAAGTGAGAGATGCTAGGCCTAAGGAGCTAGGTAGCAGTATCAACTTGGGGACTTCCTTGCCTTTGGATTCCTGGGTGAATGTCACAAGGCTCTGTGATTCTCAGCTTAAACATGGGGTTCCTGGGCCAGGAGTGAAGTCTTCTCCCCATGATTCCCATATGTGTCTAATCTATCCAGAGAGAAATCATATCCTTTTGCATCCACATTGGAACCAAGATACAGAGCAGGAGACCTCCGAATTAGAGTCTCTCTACCAGGCCAGTCTTCAGGCTTCTCAAACTGGCTGTCCTGGATGGGGGAACCAAGATGTGGCTTGGCATCCACTTAGCCAAACAGGCTTGGCAGATGGCACAGTGAGGAGATTGCACTCAGTCCCTAGTCTTGATCTCTCAAAGACCCCAACCACAGAAATGGAGCACATTCTCCGTGACATCAGCACAGTGCCTGTGTCACAGGATTCATCAAACATGAGGAAAAAGCCCTTGGAAACCAGGAACCGTTATTCCAGCTCCTCTTCCCTCCCTGTCATCCATGATCCTTCTGTGTTTCTCCTTGATTCCCAACTCTACCTTCCCCAACCACAGTTCCTGTCCCCAGATGTCCTGATGCCCAGCCTGGCAGGGGAGCCTTATAGAACCCAAGGAACTTCCAGGAATGTCCAGCAGTTTCTGGCTATGTGTGACAGGAGTGAAACTTCCCAAGCGGTCCAGTACACAGGAAGGACTTTGACCTATCGGAGTCTCCCCCATCGTTCCAGAACTGATGCTTCCTTGGGACCTTGGTCAGAGACCAACCAGCACATTAGGGCCAGACTCCTAAGTACCACAGGGTACAAGCCTCAGCTAACCCACACTGCCACACTACCAGAGAGAAGCCAGGGCTTTCAAGTTCCTCATGCTCAGTCCTGGGGAGATCTTTTCCATTCACCCTCCTACCCTTCCATTGTTCACCCTGTGTCCCCACCATCCAGCAGTCTTCGTTTATCCCCGAGGAGGTCAGCTTGGAATTCAGCTCCTGTTCCAGTCTCACGAACACCTGGTCCTCGAAGAGTAGATATTCCCCCAGATGATGATTGGAGGCAAAGCAGTTTTGCCTCCCAATCTGGACTCAGGAGGACANGGGGAGAGGGGTTTCTGTCTGTTCTAGCAGATGCCNTCAGAACAGAGCAGAACAAGGCTAGAGTCCTGCAGCACAGCAGCTGA
unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: inactive ubiquitin carboxyl-terminal hydrolase 54 [Heterocephalus glaber]
Length: 1587 aa View alignments>XP_004846338.1 MSWKRNYFSGGRGSVQGMFAPRSSTSIAPSKGLSNEPGQNSCFLNSALQVLWHLDIFRRSFRQLTTHKCMGDSCIFCALKGIFNQFQCSSEKVLPSDTLRSALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHIADETKEDICTAQHCVSHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLERREKPSPSMFGELLQNASTMGDLRNCPSNCGERIRIRRVLMNAPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKQSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYADPQGTPVSTQDLPPQAQFQPYSRTCYDSEDSGHLTDSECNQKHTSKKGSLIERKRSSGRVKRKGDEPQASGYHSEGETLKEKQAPRNASKPSSSTNRLKDFKETVSNMIHNRPSLASQTNVASPRVGKGGDQPDKKPPKSLPLNSRDWEIESTSSESKSSSSSKYRPTWRPKRESLNIDSIFSKDRRKHCGYTQLSPFSEDSAKDFTSDELSKPPTYDIKAGGPSPRYKPWGPARPGSQLLEQHPRLIQRMESGYESSERNSSSPVSLDVTLSESSNTCRDPSAKRSGGFVPSWHHIPKSHSSSILEVDSTASMSSWTKTQPLLGGEITSKSELDELQEEVTRRAQEQELRRKREKELEAAKGFNPHPSRFMDLDELQNQGRSDGFERSLQEANSVFEESLHLEQKGDCAAALALCNEAISKLRLALHGASSSTHSRALVDKKLQISIRKARSLQDRMQQQQQSSQQPSQPSACLPSQGGALPQPTSEQPIPLQVLLSQDTHLEPCTDTEFGASSYFHSPASCHESHSSLFPESPAPSAPQHNSPSRSPLKLLTSVEVDSIDSSEFHWQSVPKTPGKTENSQYDCMPLDALEGKLQGHRDDNSCRRFPPQEGRGSTQEQFQEKRDPADPCLTMLWSHQTGRPISERGDPQSLGSSLSSSSAQPSFPLCRACHPIMPAASLSVHHSPDPVEKTNQCLQAQSLQNSLTSKVDRGSEELDRPEFPSTKGLVHSLAEQFQRMQGVSMRDATDFQDKSLPNSLRKNCFPSDCQPPLPQGQEKGHCHWAKQQPCLDGRDRLPSWEEPADHASLAMDSELPNGVTSRGGQPRLAEPGVYQGKLSQVRDARPKELGSSINLGTSLPLDSWVNVTRLCDSQLKHGVPGPGVKSSPHDSHMCLIYPERNHILLHPHWNQDTEQETSELESLYQASLQASQTGCPGWGNQDVAWHPLSQTGLADGTVRRLHSVPSLDLSKTPTTEMEHILRDISTVPVSQDSSNMRKKPLETRNRYSSSSSLPVIHDPSVFLLDSQLYLPQPQFLSPDVLMPSLAGEPYRTQGTSRNVQQFLAMCDRSETSQAVQYTGRTLTYRSLPHRSRTDASLGPWSETNQHIRARLLSTTGYKPQLTHTATLPERSQGFQVPHAQSWGDLFHSPSYPSIVHPVSPPSSSLRLSPRRSAWNSAPVPVSRTPGPRRVDIPPDDDWRQSSFASQSGLRRTXGEGFLSVLADAXRTEQNKARVLQHSS