Details from NCBI annotation

Gene Symbol Sgpl1
Gene Name sphingosine-1-phosphate lyase 1, transcript variant X3
Entrez Gene ID 101719478

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SGPL1 ENSCPOG00000012699 (Guinea pig)

Gene Details

sphingosine-1-phosphate lyase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011424, Guinea pig)

Protein Percentage 91.59%
CDS Percentage 91.59%
Ka/Ks Ratio 0.184 (Ka = 0.0443, Ks = 0.241)

SGPL1 ENSG00000166224 (Human)

Gene Details

sphingosine-1-phosphate lyase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000362298, Human)

Protein Percentage 85.92%
CDS Percentage 87.38%
Ka/Ks Ratio 0.22208 (Ka = 0.0786, Ks = 0.3539)

Sgpl1 ENSMUSG00000020097 (Mouse)

Gene Details

sphingosine phosphate lyase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112975, Mouse)

Protein Percentage 84.68%
CDS Percentage 84.57%
Ka/Ks Ratio 0.17208 (Ka = 0.0877, Ks = 0.5097)

Sgpl1 ENSRNOG00000000565 (Rat)

Gene Details

sphingosine-1-phosphate lyase 1 (Sgpl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059089, Rat)

Protein Percentage 86.09%
CDS Percentage 85.04%
Ka/Ks Ratio 0.14987 (Ka = 0.0785, Ks = 0.5241)

Genome Location

Sequence Coding sequence

Length: 1707 bp    Location: 4844552..4886709   Strand: +
>XM_004846220.1
ATGCCTAGTACGGACCTTCTGATGTTGAAGAACTTTGAGCCTTACTTCGAGATTTTGGAAGCATATTCCACAAAAGCCAAGAATTATGTAAATGGGTATTGCATCAAATATGAGCCCTGGCAGCTAATTGCATGGAGTGTCCTGTGGACCCTGCTGATAGTTTGGGCATATGGGTTTATCTTCCAGCCGGAGAGCTTATGGTCAAGGTTTAAAAAGAAATTTTTTAGGCTCGTGAGGAAGATGCCGTTTCTTGGTAAGAAGATTCAGAAAGAGTTGGACAAGATCACGGAAGACCTTGGGAAGCACTTGCAGTACCTGAAAGTGGATAAAGACTATGTGAAAGCCCTGCCTGCCCAGGGTCTGAGCACAACAGCAGTCCTGGAGAGACTCAAGGAGTACAGCTCCATGGATGGTATCTGGCAAGAAGGGAAGGCCTCAGGAGCTGTGTACAGCGGGGAGGAGAAGCTCACGGAGCTGCTTGTGCAGGCGTATGGAAATTTTGCATGGAGTAACCCACTGCATCCAGATATTTTCCCAGGACTACGCAAATTAGAGGCAGAAATTGTGAGGATGGCGTGTTCCTTGTTCAATGGGGGACCAGATTCTTGTGGATGTGTGACCTCCGGGGGGACAGAAAGCATCCTGATGGCCTGCAAAGCTTATCGGGACCTGGCCTTAGAGAAGGGGATCAAAACTCCCGAAATAGTGGTTCCCGTAAGTGCCCATGCTGCATTTGACAAAGCAGCCAGTTATTTTGGGATGAAGATGGTGCGGGTCCCACTGAACAAGATGATGGAGGTGAATGTGCGGGCAATGAGAAGAGCCATCTCCAAGAACACTGCTATGCTCGTCTGCTCTGCGCCACAGTTTCCTCATGGTGTGATAGATCCTATCCCAGAAGTGGCCAAGCTGGCCATCAAATACAAAATACCTCTTCATGTAGATGCCTGTCTGGGGGGTTTCCTTATCGTCTTTATGGAGAAAGCAGGATACCCACTGGAGAAACCATTCGATTTCCGGGTAGAAGGTGTAACCAGTATTTCGGCTGATACCCATAAGTATGGCTACGCCCCCAAAGGCTCGTCCGTGGTGTTGTACCGTAACAAGAAATACAGGAAGTACCAGTTCTTCATTACTACAGATTGGCCAGGTGGCATCTACGCTTCCCCAAGCATTGCAGGCTCACGGCCTGGTGGCATCATTGCAGCCTGTTGGGCCACCTTGATGCACTTCGGTGAAAACGGCTATGTTGAAGCCACCAAACAGATCATCAAAACTGCTCGCTTCCTCCGATCTGAACTGGAAAATATTAAAGGCATCTTCATTTTCGGGGATCCTCAGTTGTCAGTCATTTCTCTGGGCTCCCATGATTTTGACATTTACCGGCTATCAAACTTGATGACTGCTAAGGGGTGGAACTTGAACCAGTTGCAGTTTCCACCCAGCATTCATATCTGCATCACATTAGTACATACCCGGAAGCGAGTGGCAATCCAGTTCTTAAAGGACGTCCGGGAATCTGTCACCCAAATCATGAAGAACTGCAAAGCAAAGGTCACAGGAATGGGTGCCATCTATGGCATGTCCCAGACAATCATTGACAGGAACCTGGTTGCAGAAATCTCCTCAGTCTTCTTGGACAGCTTGTACAGTACGGACACTGTAACCCAGGGCAGCCAGATGAATGGTTCTCCGAAACCTCGCTGA

Related Sequences

XP_004846277.1 Protein

Sgpl1 PREDICTED: sphingosine-1-phosphate lyase 1 isoform X3 [Heterocephalus glaber]

Length: 568 aa      View alignments
>XP_004846277.1
MPSTDLLMLKNFEPYFEILEAYSTKAKNYVNGYCIKYEPWQLIAWSVLWTLLIVWAYGFIFQPESLWSRFKKKFFRLVRKMPFLGKKIQKELDKITEDLGKHLQYLKVDKDYVKALPAQGLSTTAVLERLKEYSSMDGIWQEGKASGAVYSGEEKLTELLVQAYGNFAWSNPLHPDIFPGLRKLEAEIVRMACSLFNGGPDSCGCVTSGGTESILMACKAYRDLALEKGIKTPEIVVPVSAHAAFDKAASYFGMKMVRVPLNKMMEVNVRAMRRAISKNTAMLVCSAPQFPHGVIDPIPEVAKLAIKYKIPLHVDACLGGFLIVFMEKAGYPLEKPFDFRVEGVTSISADTHKYGYAPKGSSVVLYRNKKYRKYQFFITTDWPGGIYASPSIAGSRPGGIIAACWATLMHFGENGYVEATKQIIKTARFLRSELENIKGIFIFGDPQLSVISLGSHDFDIYRLSNLMTAKGWNLNQLQFPPSIHICITLVHTRKRVAIQFLKDVRESVTQIMKNCKAKVTGMGAIYGMSQTIIDRNLVAEISSVFLDSLYSTDTVTQGSQMNGSPKPR