Details from NCBI annotation

Gene Symbol Pcbd1
Gene Name pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha
Entrez Gene ID 101719124

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCBD1 ENSCPOG00000012703 (Guinea pig)

Gene Details

pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011428, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 94.82%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2317)

PCBD1 ENSG00000166228 (Human)

Gene Details

pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha

External Links

Gene Match (Ensembl Protein ID: ENSP00000299299, Human)

Protein Percentage 100.0%
CDS Percentage 92.63%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.3974)

Pcbd1 ENSMUSG00000020098 (Mouse)

Gene Details

pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020298, Mouse)

Protein Percentage 99.04%
CDS Percentage 89.74%
Ka/Ks Ratio 0.0078 (Ka = 0.0044, Ks = 0.5628)

Pcbd1 ENSRNOG00000000566 (Rat)

Gene Details

pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (Pcbd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000687, Rat)

Protein Percentage 100.0%
CDS Percentage 90.06%
Ka/Ks Ratio 0.001 (Ka = 0.0006, Ks = 0.5779)

Genome Location

Sequence Coding sequence

Length: 315 bp    Location: 4898364..4893864   Strand: -
>XM_004846217.1
ATGGCTGGCAAAGCACACAGGCTGAGTGCTGAAGAGAGGGATCAGCTGTTGCCCAACCTGAGGGCTGTGGGGTGGAATGAGCTAGAAGGCCGAGATGCCATCTTCAAGCAGTTCCACTTCAAAGATTTCAACAGGGCTTTTGGCTTCATGACCAGAGTGGCTCTGCAGGCTGAAAAGCTGGACCACCATCCTGAATGGTTTAATGTATACAACAAGGTGCACATCACCCTGAGCACCCATGAATGTGCGGGCCTTTCAGAACGGGATATAAACCTGGCCAGCTTCATCGAACAAGTAGCAGTGTCCATGACATAG

Related Sequences

XP_004846274.1 Protein

Pcbd1 PREDICTED: pterin-4-alpha-carbinolamine dehydratase [Heterocephalus glaber]

Length: 104 aa      View alignments
>XP_004846274.1
MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT