Sequence details NCBI ID: XM_004846211.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pald1
Gene Name phosphatase domain containing, paladin 1, transcript variant X4
Entrez Gene ID 101716591

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PALD1 ENSCPOG00000027030 (Guinea pig)

Gene Details

phosphatase domain containing, paladin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020786, Guinea pig)

Protein Percentage 86.68%
CDS Percentage 89.52%
Ka/Ks Ratio 0.18006 (Ka = 0.0664, Ks = 0.3689)

PALD1 ENSG00000107719 (Human)

Gene Details

phosphatase domain containing, paladin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000263563, Human)

Protein Percentage 84.58%
CDS Percentage 86.1%
Ka/Ks Ratio 0.13226 (Ka = 0.0832, Ks = 0.6293)

Pald1 ENSMUSG00000020092 (Mouse)

Gene Details

phosphatase domain containing, paladin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020289, Mouse)

Protein Percentage 78.97%
CDS Percentage 81.97%
Ka/Ks Ratio 0.13475 (Ka = 0.1146, Ks = 0.8507)

Pald1 ENSRNOG00000000561 (Rat)

Gene Details

phosphatase domain containing, paladin 1 (Pald1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062593, Rat)

Protein Percentage 79.21%
CDS Percentage 81.89%
Ka/Ks Ratio 0.13243 (Ka = 0.1135, Ks = 0.8569)

Genome Location

Sequence Coding sequence

Length: 2571 bp    Location: 4592269..4660668   Strand: +
Raw sequence   
>XM_004846211.1
ATGGGTACGACGGCCAGCACAGCCCAGCAGACGGTCTCAGCGGGCACCCCCCTCGAGGGTCTCCAGGGTGGTGGCACAATGGACAGCCGACATTCATTCAGCATCCACACCTTCCATTCCACAAGCCTGCACAATAGCAAGGCTAAGTCCATCATCCCCAACAAGGTTGCCCCTGTTGTGATCACGTACAACTGCAAGGAGGAGTTCCAGATCCATGACGAGCCGCTCAAGGCCCATTACACACTGGGCCGGCTCTCGGATGGCACCCCTGAGCACTACCTGGTGCAGGGCCACTACTTTCTGGTTCGGGATGTTACTGAGAAGATGGATGTGCTGGGCACCTCTGGGAGCTGTGGGGCCCCCAACTTCCGGCAGGCACGGGGAGAGCCTACTGTGTTTGGCATGGGACAGCCCAGCCTCTTGGGGTTCAAGCAGATCCTGCAGAAACTCCAGAAGGATGGACATAAGGAGTGCATCATCTTCTGTGTTCGGGAGGAGCCTGTGCTGTTCCTGCGTGCTGATGAGGACTTTGTGTCCTACACGCCTCGAGACAAACAGAACCTTCACGAGAACCTCCAGGGCCTGGGGCCTGGGGTCCGGGTGGAGAGCATGGAGCTGGCCATCCGGAAAGAGATCCAAGACTTTGCCCAGCTGAGCACGAACACGTACTACGTGTACCATGACACGGAGGACCTGCGGGGGCAGCCCTGTGCCGTGGCCATCTGGGGTGAGGACGACGTGCATGTGACTGAGGAGGTGTACAAGCGGCCTCTCTTCCTCCAGCCCGCCTACAGGTACCACCGCCTGGCCCTGCCAGAACAAGGGGCCCCCCTGGAAGCCCAGTTTGACGCCTTTGTCAGCGTCCTTCGGGAGACCCCCAGCCTGCTTCGTCTCCGAGATGCCCACGGGTCTGCCCCCACCCTCCTCTTCAGCTGCCATTCGGGTGTGGGCAGGACCAACCTGGGCATGGTCCTGGGCACCCTCGTGCTGTTTCACCACAGGGGGAGCACCTCACAGGCAGAGTCCGGCCCCCCGAAGACCAAGTCCCTGCCCATGGAGCAGTTCCAGGTGGTCCAGAGCTTTCTGCACACGGTGCCCCAGGGAAGGAGGATGGTGGAGGAGGTGGACAGAGCCATTGCTGCCTGTGCTGAATTGCATGATCTGAAGGAGGAGGCCCTGGCGAACCAGAGGAAGCTGGCAGGTGACCGGCCGGTGAGCAGAGCGCAGGGAAGCAGCGGGCAGCATGTTGCCCGGCAGAGGGCGCTGCGGAGCCTGGAGCGCTACTTCTACCTGATCCTGTTCAGCTACTATCTGCATGAGCAGTACCCCCTGGCCTTTGCCCTCAGTTTCAGCCGCTGGCTGTGCGCCCATCCCGAGCTGTACCGCCTGCCTATGACTCTGAGCTTGGCGGGGCCTGTGGCTCCCAGGGACCTCCTTGCCCAGGGCTCCCTGGAGGCAGATGACCTTGTGTCCCCGGATGCGCTCAGCACTGTCAGAGAGATGGACGTGGCCAACTTCCGGCGTGTGCCCCGCATGCCCATCTATGGCATGGCCCAGCCTAGTGCCAAGGCCCTGGGCACCATCCTGACCTACCTGACCGATGCCAAAAGGAAGCTGCAGCAGGTGGTCTGGGTCAACTTGCGGGAGGACGCCGTGCTGGAGTGTGATGGTCACACTCGAAGCCTGCGGCTGCCTGGTTCCCCCATGACCCCCGCCCAGTTGGAGGCCACGGAGGCCCAGCTGAAGGCCCACCTGAGCAAGCCACCCTCCGACACAAAGGGCCCACTGCCCCCCAGGTTCCAGACGTGCCTCACCATGCAGGAGATCTTCAGCCAGCGCCGTGGGGCCTGCCCCGGCCTCACCTACCACCGTGTCCCCCTAATGGACTTCTGTGCCCCTAGAGAGGAGGACTTTGACAAGCTGCTGGAGGCCCTGCGGGCTGCCCTTGCCAAGGACACTGGCACTGGCTTTGTGTTCAGCTGCCTCAGCGGACAGGGCCGGACCACAACTGCTATGGTGGTGGCTGTGCTGGCCTTCTGGCGCATCCGAGGCTGCCCCGAGGTGGGTGAGGAAGAGCTCGTGAGCGTGCCTGATGCCAAGTTTACCAAAGGCGAGTTTCAGGTAGTGATGAAGGTGGTGCAGCTGCTGCCCGACGGGCACCGTGTGAAGAAGGAGGTGGACGCAGCACTGGACACAGTCAGCGAGACCATGACACCCATGCACTACCACCTGCGGGAAATCATCATCTGCACCTACCGCCAGGCGAAAGCTGCCAAAGATGAGCAGGAGGCACGGAGACTGCAGCTTCGCAGCCTGCAGTACCTGGAGCGCTACATCTACCTGATCCTTTTCAATGCCTACCTCCACCTGGAGGAGGTGTGCTCCTGGCAGAGGCCCTTCAGCACCTGGATGTGGGAGGTGGCATCCAAGGCTGGAATCTATGAGATCCTCAACCAGCTGGGCTTCCCTGAGCTGGAGAGCACGGAGGACCAGCCCTTCTCCAGGCTTCGACACCGGTGGCAGGAGCGGAGCCTCGGGCCTGAGCCCTCAGCTGGCAGGGACTTCCTGTAG

Related Sequences

XP_004846268.1 Protein

Pald1 PREDICTED: paladin isoform X4 [Heterocephalus glaber]

Length: 856 aa      View alignments
>XP_004846268.1
MGTTASTAQQTVSAGTPLEGLQGGGTMDSRHSFSIHTFHSTSLHNSKAKSIIPNKVAPVVITYNCKEEFQIHDEPLKAHYTLGRLSDGTPEHYLVQGHYFLVRDVTEKMDVLGTSGSCGAPNFRQARGEPTVFGMGQPSLLGFKQILQKLQKDGHKECIIFCVREEPVLFLRADEDFVSYTPRDKQNLHENLQGLGPGVRVESMELAIRKEIQDFAQLSTNTYYVYHDTEDLRGQPCAVAIWGEDDVHVTEEVYKRPLFLQPAYRYHRLALPEQGAPLEAQFDAFVSVLRETPSLLRLRDAHGSAPTLLFSCHSGVGRTNLGMVLGTLVLFHHRGSTSQAESGPPKTKSLPMEQFQVVQSFLHTVPQGRRMVEEVDRAIAACAELHDLKEEALANQRKLAGDRPVSRAQGSSGQHVARQRALRSLERYFYLILFSYYLHEQYPLAFALSFSRWLCAHPELYRLPMTLSLAGPVAPRDLLAQGSLEADDLVSPDALSTVREMDVANFRRVPRMPIYGMAQPSAKALGTILTYLTDAKRKLQQVVWVNLREDAVLECDGHTRSLRLPGSPMTPAQLEATEAQLKAHLSKPPSDTKGPLPPRFQTCLTMQEIFSQRRGACPGLTYHRVPLMDFCAPREEDFDKLLEALRAALAKDTGTGFVFSCLSGQGRTTTAMVVAVLAFWRIRGCPEVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGHRVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKDEQEARRLQLRSLQYLERYIYLILFNAYLHLEEVCSWQRPFSTWMWEVASKAGIYEILNQLGFPELESTEDQPFSRLRHRWQERSLGPEPSAGRDFL