Sequence details NCBI ID: XM_004846186.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tspan15
Gene Name tetraspanin 15
Entrez Gene ID 101709829

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TSPAN15 ENSCPOG00000006015 (Guinea pig)

Gene Details

tetraspanin 15

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005429, Guinea pig)

Protein Percentage 94.56%
CDS Percentage 93.2%
Ka/Ks Ratio 0.09129 (Ka = 0.0271, Ks = 0.2973)

TSPAN15 ENSG00000099282 (Human)

Gene Details

tetraspanin 15

External Links

Gene Match (Ensembl Protein ID: ENSP00000362387, Human)

Protein Percentage 93.2%
CDS Percentage 90.48%
Ka/Ks Ratio 0.05529 (Ka = 0.0298, Ks = 0.5392)

Tspan15 ENSMUSG00000037031 (Mouse)

Gene Details

tetraspanin 15

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047029, Mouse)

Protein Percentage 91.84%
CDS Percentage 86.85%
Ka/Ks Ratio 0.04401 (Ka = 0.0414, Ks = 0.9406)

Tspan15 ENSRNOG00000046204 (Rat)

Gene Details

uncharacterized protein LOC679462

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065267, Rat)

Protein Percentage 80.95%
CDS Percentage 78.12%
Ka/Ks Ratio 0.09353 (Ka = 0.1314, Ks = 1.4054)

Genome Location

Sequence Coding sequence

Length: 885 bp    Location: 3703114..3748265   Strand: +
Raw sequence   
>XM_004846186.1
ATGCCCCGCGGGGACTCGGAGCAGGTGCGCTACTGCGCGCGCTTCTCCTACCTCTGGCTCAAGTTCTCGCTCATCATCTACTCCACAGTGTTCTGGCTGATCGGGGCCCTGGTGCTGTCCGTGGGGATCTATGCGGAGGTGGAGCGTCAGAAGTACAAAACCCTGGAAAGTGCCTTCCTGGCCCCGGCCATCATCCTCATCCTCCTGGGGGTCGTCATGTTCATCGTCTCCTTCATTGGTGTGCTGGCCTCCCTCCGGGACAACCTGTGCCTTCTTCAAGCATTTATGTACATCCTTGGGATCTGCCTCATAATGGAGCTCATTGGTGGTGTGGTGGCCTTGATCTTCCGGAACCAGACCATTGACTTTCTGAATAACAACATTCGAAGAGGAATTGAGAACTACTATGACGACCTAGACTTCAAAAACATCATGGACTTTGTTCAGAAGCAGTTCAAGTGCTGTGGCGGAGAAGACTACCAAGACTGGAGCAAAAACCAGTACCATGACTGCAGTGCCCCCGGGCCGCTGGCCTGTGGGGTGCCCTACACCTGCTGCCTCAGGAACAAGACAGATGTCATCAACACCATGTGTGGCTACAAAACTATCGACAAGGAGCGCCTCAGCGTGCAGAACGTCATCTACGTCCGGGGCTGCACCAACGCCGTGCTCATCTGGTTCATGGACAACTACACCATCATGGCGGGGCTCCTGCTGGGCATTCTGCTCCCCCAGTTCTTGGGGGTGCTGCTAACGCTCCTGTATATCACCCGAGTGGAGGACATCATCACAGAGCATTCTGTCACCGACGGGCTCCTGGGACCTGGCACCCAGCCCAGAGTGGAGGCGGTGGGCACAGGGTGCTGCTTGTGCTACCCCAGTTAG

Related Sequences

XP_004846243.1 Protein

Tspan15 PREDICTED: tetraspanin-15 [Heterocephalus glaber]

Length: 294 aa      View alignments
>XP_004846243.1
MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESAFLAPAIILILLGVVMFIVSFIGVLASLRDNLCLLQAFMYILGICLIMELIGGVVALIFRNQTIDFLNNNIRRGIENYYDDLDFKNIMDFVQKQFKCCGGEDYQDWSKNQYHDCSAPGPLACGVPYTCCLRNKTDVINTMCGYKTIDKERLSVQNVIYVRGCTNAVLIWFMDNYTIMAGLLLGILLPQFLGVLLTLLYITRVEDIITEHSVTDGLLGPGTQPRVEAVGTGCCLCYPS