Details from NCBI annotation

Gene Symbol Ptp4a1
Gene Name protein tyrosine phosphatase type IVA, member 1, transcript variant X2
Entrez Gene ID 101724177

Database interlinks

Part of NW_004624753.1 (Scaffold)

For more information consult the page for NW_004624753.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTP4A1 ENSCPOG00000025759 (Guinea pig)

Gene Details

protein tyrosine phosphatase type IVA, member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018838, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 96.72%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1341)

PTP4A1 ENSG00000112245 (Human)

Gene Details

protein tyrosine phosphatase type IVA, member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000359685, Human)

Protein Percentage 97.69%
CDS Percentage 94.41%
Ka/Ks Ratio 0.0495 (Ka = 0.0108, Ks = 0.2173)

Ptp4a1 ENSMUSG00000026064 (Mouse)

Gene Details

protein tyrosine phosphatase 4a1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027232, Mouse)

Protein Percentage 97.69%
CDS Percentage 91.91%
Ka/Ks Ratio 0.02912 (Ka = 0.0107, Ks = 0.367)

Genome Location

Sequence Coding sequence

Length: 522 bp    Location: 21918481..21923867   Strand: +
>XM_004846111.1
ATGGCTCGAATGAACCGCCCAGCTCCTGTGGAAGTCACATACAAGAGCATGAGATTCCTCATTACACACAATCCAACCAATGCAACCTTAAACAAGTTTATAGAGGAACTTAAGAAGTATGGAGTTACCACAATAGTAAGAGTATGTGAAGCAACGTATGACACTACACTTGTAGAGAAGGAAGGCATCCATGTTTTTGATTGGCCATTTGATGATGGTGCACCACCGTCCAACCAGATTGTTGATGACTGGTTAAATCTTGTAAAAATTAAGTTTCGTGAAGAACCTGGTTGTTGTATTGCTGTCCATTGTGTTGCAGGCCTTGGGAGAGCTCCAGTGCTTGTTGCCCTAGCATTAATTGAAGGTGGAATGAAATACGAAGATGCAGTACAGTTCATAAGACAAAAGCGGCGCGGAGCTTTTAACAGCAAGCAACTCTTATATCTGGAGAAGTATCGTCCTAAAATGCGGCTGCGGTTCAAAGACTCCAACGGTCACAGGAACAACTGTTGCATGCAATAA

Related Sequences

XP_004846168.1 Protein

Ptp4a1 PREDICTED: protein tyrosine phosphatase type IVA 1 isoform X2 [Heterocephalus glaber]

Length: 173 aa     
>XP_004846168.1
MARMNRPAPVEVTYKSMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVFDWPFDDGAPPSNQIVDDWLNLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCMQ