Details from NCBI annotation

Gene Symbol Vta1
Gene Name Vps20-associated 1 homolog (S. cerevisiae)
Entrez Gene ID 101696966

Database interlinks

Part of NW_004624753.1 (Scaffold)

For more information consult the page for NW_004624753.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VTA1 ENSCPOG00000004721 (Guinea pig)

Gene Details

vesicle (multivesicular body) trafficking 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004253, Guinea pig)

Protein Percentage 95.44%
CDS Percentage 93.7%
Ka/Ks Ratio 0.1082 (Ka = 0.0229, Ks = 0.2116)

VTA1 ENSG00000009844 (Human)

Gene Details

vesicle (multivesicular body) trafficking 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000356602, Human)

Protein Percentage 94.14%
CDS Percentage 90.66%
Ka/Ks Ratio 0.0744 (Ka = 0.0275, Ks = 0.3697)

Vta1 ENSMUSG00000019868 (Mouse)

Gene Details

Vps20-associated 1 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000119829, Mouse)

Protein Percentage 92.16%
CDS Percentage 88.02%
Ka/Ks Ratio 0.09166 (Ka = 0.0425, Ks = 0.4642)

Vta1 ENSRNOG00000011540 (Rat)

Gene Details

Vps20-associated 1 homolog (S. cerevisiae) (Vta1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061074, Rat)

Protein Percentage 88.31%
CDS Percentage 83.87%
Ka/Ks Ratio 0.13285 (Ka = 0.0795, Ks = 0.5983)

Genome Location

Sequence Coding sequence

Length: 924 bp    Location: 11964337..11901098   Strand: -
>XM_004846050.1
ATGGCCGCGCTGGCTCAGCTGCCCCCGTTGCCCCCACAGTTTAAGAGCATACAGCATCATCTGAGGACGGCTCAGGAGCATGACAAGCGGGACCCTGTGGTGGCCTATTACTGTCGGTTATATGCTATGCAAACTGGAATGAAGATTGATAGTAAAACTCCTGAATGTCGTAAATTTTTATCAAAGCTAATGGATCAATTAGAAGCTCTTAAGAAACAGTTGGGTGATAATGAAGCTATTACACAAGAAATAGTTGGTTCTGCTCATTTGGAGAATTACGCTTTGAAAATGTTTTTGTACGCAGATAATGAAGATCGTGCTGGGCGATTTCATAAAAATATGATCAAGTCCTTCTACACTGCAAGCCTTTTAATAGATGTCATAACAGTATTTGGAGAACTCACCGATGAAAATGTGAAACACAGAAAGTACGCAAGGTGGAAGGCAACATACATCCATAATTGTTTAAAAAATGGAGAAACTCCTCAAGCAGGCCCTGTTGGAATTGAGGAAGATAATGATATTGAAGAAAATGAAGATGCTGGCGCAGCCTCTCTGCCCACTCAGCCACCTCAGCCGTCATCCTCTTCAGCTTTTGACCCAAGCAGCATCCCATCAGGCAGCTATAGTGGAATCCAGATCCCTCCGGGTGCACACGCCCCAGCTAACACACCCGCAGAAGTGCCACACAGCACAGGTGTAACGAGTAATCCTATCCAGCCTTCTCCACAGACTGTCCCCGCCATTGAGCCTGCACTGTTCAGCACAGTTTCCCAGGGGGATGTCCGTCTAACTCCAGAGGACTTTGCTAGAGCTCAGAAATACTGCAAATATGCTGGCAGTGCTTTGCAGTATGAGGACGTAAGCACAGCCATACAGAATCTACAGAAAGCCCTCAAGTTACTGACAACAGGCAGAGAATGA

Related Sequences

XP_004846107.1 Protein

Vta1 PREDICTED: vacuolar protein sorting-associated protein VTA1 homolog [Heterocephalus glaber]

Length: 307 aa      View alignments
>XP_004846107.1
MAALAQLPPLPPQFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGSAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDIEENEDAGAASLPTQPPQPSSSSAFDPSSIPSGSYSGIQIPPGAHAPANTPAEVPHSTGVTSNPIQPSPQTVPAIEPALFSTVSQGDVRLTPEDFARAQKYCKYAGSALQYEDVSTAIQNLQKALKLLTTGRE