| Gene Symbol | Shprh |
|---|---|
| Gene Name | SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase, transcript variant X4 |
| Entrez Gene ID | 101713922 |
For more information consult the page for NW_004624753.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase
| Protein Percentage | 91.69% |
|---|---|
| CDS Percentage | 90.42% |
| Ka/Ks Ratio | 0.17418 (Ka = 0.0497, Ks = 0.2855) |
SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase
| Protein Percentage | 89.65% |
|---|---|
| CDS Percentage | 88.54% |
| Ka/Ks Ratio | 0.15769 (Ka = 0.0575, Ks = 0.3647) |
SNF2 histone linker PHD RING helicase
| Protein Percentage | 86.32% |
|---|---|
| CDS Percentage | 84.09% |
| Ka/Ks Ratio | 0.13525 (Ka = 0.0794, Ks = 0.5873) |
SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase (Shprh), mRNA
| Protein Percentage | 85.89% |
|---|---|
| CDS Percentage | 83.06% |
| Ka/Ks Ratio | 0.12669 (Ka = 0.0836, Ks = 0.6596) |
>XM_004846015.1 ATGAGCAGCCGACGGAAACGGGCCCCTCCAGTGAAGGTAGATGAGGAAAAGCAGCAGCAGCTCCGTTGGAACATGCACGAGGACCGGAGGAACGAGCCTCTTGCCTTGACTGATGATGAGCAGCCCTGCACAGGTGCTGACTGCTCTCCTCAGTGCGTCCAGGAGGACGATAGTCTGCAGGACGAAGTGGCTCACAGAGATAAGAAGAGGTGCTCTGAGGCTGTGAGCTTCTCAACAGCAACCAAGAAAGAAGAGACTGTTGGTGATTTTCTCTCTTTGTCTGTAAAGTTGAACATTGTGATTTTTCCCTGTCACTCTGATAGTTCTTGGAAAGCATTTCTGGGAGAACTAATTCTTCAGCTTCTTCCTGAGCAGAGTTTAGATGATAATTTTTCTGAGAAGAGTTTTACCTTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATATATGTTCATTCTGAATGTGAGGATGTGGAGAAACAAGAAAAGGGACTGAAAGAATCAGTCAACATTTGTGACAAGGGCATTCGAGTGGAATCATCTTTCAGTGGTGAAATGCTAGAAGACTTGGGGTGGCTGCAAAAGAAGAAAAGAATAAAACTTTACCAAAGACCAGAAGGAAGGCACGTTATCAAGGTTGGAATTTATGTTCTGGAAGATGGCCTAGCAAAACTGGACTCTTTCAGTGATGCAAGTTCAAGAATGAAAAAGTTCAATCAACTCATGAAGAAGGTGATGGAAAAGTTATATAATTTTATTATTCCAGATGTATTGGGAGATGATGAGGAAGACTCAGATAGTGAGCCGGAGGGACAGGACATTGATGAGCTCTATCACTTTGTGAAGCAAACACATCAGCAGGAAACACAGTCTGTCCCCGTGGATGTGCAGCATCCTGCGCTGATGCCCGTGCTGAGACCCTACCAGAGAGAGGCTGTCAACTGGATGCTACAGCAAGAGCATTTCAGAAGCGCTCCTACTGATGAAAGTTCCCTGCACTTCTTGTGGCGAGAGATTATTACACCTGAGGGTTTGAAACTGTACTATAATCCATATACAGGCTGCATCACCCGTGAGCACCCACATTCTGGACCACAGTTGCTTGGTGGAATCCTAGCAGATGAGATGGGTCTTGGAAAGACAGTGGAGGTTTTGGCGCTCATTCTGACACATACTCGACAAGATGTCAAACAAGACACTCTCACTCTTCCTGAGGGGAAAGAGGTGAGCTATTTCATCCCGTCCCATTGTTTCAGAGGGTCAGTTAAGGACACGGAAAGTCAGAATATGGGATTAGAACCAAAAGAAAAAGTTCAGTGCCCCCCTACACGTGTGATGATCCTGACAGCTGTAAAAGAAATGAATGGGAAAAAAGGAGTTTCTATCCTTTCCATCTATAAGTATGTCAGTTCTATATATAGATACGACGTTCAACGAAACAGGAGTCTTCTGAAACGGATGCTGAAATGTTTAATTTTTGAAGGTCTTGTGAAACAGATCAAAGGTCATGGTTTCTCAGGGACCTTTACATTGGGGAAGAATTACAAGGAGGAGGATATATGCGATAAAACAAAAAAGCAGGCAGTAGGAAGTCCAAGGAAATTTCAGAAAGAACCCAGAAAATCAGGGAATAAGGACACAGATTCTGAATACTTGCCATCAAATACCTCCGACGATGATGATGACCCTTACTATTATTATTATAAGGCCAGGAAAAATCGTAGTAAACTGAAGAAAAAGCCTGTGCCATCCACAGAAAAAGGGAAAAGTCAGCCTGACACCGTTGCTGACATACAAGGTCACTGTCCAGCCGCAAGTGAGTCTGGAATTACTGATGTTGCCATGTCTGAAAGTACATGTGTCTATGAAGTCAAGCAAGAGCAAGAAGCTAAGGACCATTGTGAATCTCTAAACCCTGCCAGGAATGAGGGGCCACATTCTAACGTCCTGAGTCCCTATGATAATGCTGATTATCGCTTTGAGTGCATATGTGGTGAATTTGACCAGATAGACCGTAAGCCCCGCGTTCAATGCCTGAACTGCCACCTGTGGCAGCATGCAAAGTGTGTGAACTATAAAGAGGAAAACCTGAAAATTAAGCCTTTTTACTGCCCCCACTGCCTTGTGGCAATGGAGCCAGTGTCAACAAGAGCAACTCTGATCATCTCGCCAAGCTCCATCTGCCACCAGTGGGTGGACGAGATCAACCGGCATGTGAAGTCCTCATCTCTTCGAGTCTTGGTATATCAAGGAGTAAAGAAAGATGGCTTTTTACAACCTCACTTCTTAGCAGAACAAGATATAGTTATCATCACCTATGATGTCCTTCGTTCAGAACTGAACTACGTGGATATCCCACATAGCAATAGTGAGGATGGGCGTCGCCTACGGAACCAGAAGCGATACATGGCCATTCCCAGCCCCCTGGTGGCTGTGGAGTGGTGGAGGATCTGCCTCGATGAAGCCCAGATGGTTGAATGTCCTGCAGTGAAAGCTGCAGAAATGGCCCTGCGTTTGAGTGGGATTAATCGGTGGTGCATCAGCGGCACTCCAGTACAGAGAGGCCTGGAGGATCTTTTCGGGTTAGTGGTCTTTCTTGGTATCGAACCTTACTGTGTCAAACACTGGTGGTTTCGGCTCCTCTATCGCCCTTACTGCAAGAAGAATCCTCAGCATCTCTACAGCTTTATTGCCAAGATTCTGTGGAGGTCTGCAAAGAAAGACGTGATCGACCAAATCCAGATACCACCTCAGACCGAAGAAACACACTGGCTGCACTTTTCTCCGGTGGAAAGACACTTCTATCACCGGCAGCATGAGGTCTGCTGCCAGGATGCCGTGGTCAAACTCAGGAAGATTTCTGACTGGGCTCTGAAGCTCGGCAGCCTGGACCGAAGGACTGTCACCTCCATCCTGTACCCATTGCTGAGGCTCAGGCAGGCCTGCTGCCACCCACAGGCTGTGCGCGGGGAGTTCTTGCCCCTTCAAAAAAGCACCATGACAATGGAGGAGCTGCTGACATCGCTGCAGAAGAAATGTGGGACTGAATGTGAAGAAGCGCATCGGCAGCTCGTCTGTGCCCTCAATGGCTTAGCAGGCATCCACATCATTAAAGGCGAGTATGCTTTGGCAGCGGAACTGTACAGGGAAGTGTTACGTTCATCTGAGGAACACAAAGGAAAACTCAAAACTGATTCACTTCAAAGACTTCATGCTACCCATAACTTGATGGAATTATTGGTAGCCAAGCACCCAGGGATACCTCCTACCCTGCGAGATAGTAGACTTGAAGAAGAGGCCAAACAGCTGCAAGAGCACTACATGAGCAAGTGTAATACAGAAGTAGCTGAAGCCCACCAAGCTTTACACCCTGTGCAACAGACTGTACGCGAGCTCCAAAGAAAAATTCATTCTAATTCGCCTTGGTGGCTGAACGTAATCCATAGAGCAATAGAATTTTCTAAGGATGAGGAACTTGTTCAGCGAGTACGAAATGAAATAACCAGCAACTACAAGCAACAAACCGACAAGCTTTCTATGTCAGAGAAGTTCCACGACTGCAGAGGTCTTCAGTTCTTACTTACAACACAAATGGATGAACTAAGTAAATTCCAGAAGCTGGTAAGAGAAGCTGTCAAAAACCTAGAGAAACCTCCATCCCGTAATGTTATTGAATCTGCAACAATCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGTTGTGTCTTCTGTAAAGCTGATGAATTGTTCACAGAGTATGAGTCAAAACTGTTTTCTAACACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATGATAGAAGATGAGGAAGGTCTGGTGGATGATCGAGTACCTACCACCACCCGGGGCCTGTGGGCAATAAGTGAAACAGAGCGATCCATGAAAGCAATACTGTCATTTGCAAGATCACATAGATTGGATGCGGAATTCATAGATGAAGGAAGTGCCTCAATGGAACTCTTTGAAGCATGGAAGAAGGAATATAAGTTGCTTCATGAGTATTGGATGACCCTGAGGAATCGTGTATCTGCTGTCGATGAACTCGCAATGGCTACAGAACGACTAAGAGTGCGGCATCCTAAGGAGCCAAAGCCAAACCCACCTGTTCATCATATCATTGAGCCACATGAGGTAGAACAAAATCGTATAAAACTACTAAATGATAAAGCCGTTGCCACATCACAGCTTCAGAAGAAACTTGGACAGCTTCTTTACCTAACTAATTTGGAAAAGTCTCAAGACAAAACATCAGGAGGTATTAATCCAGAACCTTGTCCGATCTGTGCTCGACAGCTGGGAAAACAGTGGGCAGTGCTAACCTGTGGGCACTGTTTCTGCAATGAGTGCATCGCTATCATTATTGAGCAGTACAGTGTGGGGTCTCACAGAAGCTCCATTAAATGTGCCATCTGCCGCCAGACCACATCTCACAAAGAAATCTCCTATGTCTTCACCTCAGAGCGAGCAAGCCAAGAGGAGGACATCCCGGTGCAGGGTAGCCATTCCACAAAAGTAGAAGCGGTGGTCCGAACCCTCATGAGAATACAGCGCACAGACCCAGGAGCTAAAGCCCTTGTTTTCTCTACGTGGCAAGATGTATTAGATATTATTTCAAAAGCTCTTACCGACAACAACATGGAATTTGCACAAATCAGTCGTGTTAAGACATTTCAGGAGAACCTATCAGCGTTTAAACATGATCCCCAAATCAATATTTTGCTGCTGCCCCTGCACACAGGTTCTAATGGATTAACTATCATTGAAGCAACTCATGTTCTCTTGGTGGAGCCCATATTGAACCCTGCCCATGAGCTGCAGGCCATAGGGAGGGTGCACCGAATTGGACAGACAAAACCTACAATTGTACACAGATTCTTAATTAAAGCAACAATAGAAGAAAGAATGCAGGCCATGCTGAAAACTGCGGAGAGGAGTCATATGAACTCATCAGGGAAGCATTCCGAGGCCTCCGTTCTGACTGTGGCTGATCTGGCAGACCTGTTCACCAAAGAACCTGAAGAGCTCGAGTGA
Shprh PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X4 [Heterocephalus glaber]
Length: 1684 aa View alignments>XP_004846072.1 MSSRRKRAPPVKVDEEKQQQLRWNMHEDRRNEPLALTDDEQPCTGADCSPQCVQEDDSLQDEVAHRDKKRCSEAVSFSTATKKEETVGDFLSLSVKLNIVIFPCHSDSSWKAFLGELILQLLPEQSLDDNFSEKSFTLMSSESSNQFLIYVHSECEDVEKQEKGLKESVNICDKGIRVESSFSGEMLEDLGWLQKKKRIKLYQRPEGRHVIKVGIYVLEDGLAKLDSFSDASSRMKKFNQLMKKVMEKLYNFIIPDVLGDDEEDSDSEPEGQDIDELYHFVKQTHQQETQSVPVDVQHPALMPVLRPYQREAVNWMLQQEHFRSAPTDESSLHFLWREIITPEGLKLYYNPYTGCITREHPHSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDTLTLPEGKEVSYFIPSHCFRGSVKDTESQNMGLEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKFQKEPRKSGNKDTDSEYLPSNTSDDDDDPYYYYYKARKNRSKLKKKPVPSTEKGKSQPDTVADIQGHCPAASESGITDVAMSESTCVYEVKQEQEAKDHCESLNPARNEGPHSNVLSPYDNADYRFECICGEFDQIDRKPRVQCLNCHLWQHAKCVNYKEENLKIKPFYCPHCLVAMEPVSTRATLIISPSSICHQWVDEINRHVKSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPAVKAAEMALRLSGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWFRLLYRPYCKKNPQHLYSFIAKILWRSAKKDVIDQIQIPPQTEETHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALKLGSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLVAKHPGIPPTLRDSRLEEEAKQLQEHYMSKCNTEVAEAHQALHPVQQTVRELQRKIHSNSPWWLNVIHRAIEFSKDEELVQRVRNEITSNYKQQTDKLSMSEKFHDCRGLQFLLTTQMDELSKFQKLVREAVKNLEKPPSRNVIESATICHLRPARLPLNCCVFCKADELFTEYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRVPTTTRGLWAISETERSMKAILSFARSHRLDAEFIDEGSASMELFEAWKKEYKLLHEYWMTLRNRVSAVDELAMATERLRVRHPKEPKPNPPVHHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGINPEPCPICARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVFTSERASQEEDIPVQGSHSTKVEAVVRTLMRIQRTDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHMNSSGKHSEASVLTVADLADLFTKEPEELE