Sequence details NCBI ID: XM_004846012.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Shprh
Gene Name SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase, transcript variant X1
Entrez Gene ID 101713922

Database interlinks

Part of NW_004624753.1 (Scaffold)

For more information consult the page for NW_004624753.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 5055 bp    Location: 8501799..8580916   Strand: +
Raw sequence   
>XM_004846012.1
ATGAGCAGCCGACGGAAACGGGCCCCTCCAGTGAAGGTAGATGAGGAAAAGCAGCAGCAGCTCCGTTGGAACATGCACGAGGACCGGAGGAACGAGCCTCTTGCCTTGACTGATGATGAGCAGCCCTGCACAGGTGCTGACTGCTCTCCTCAGTGCGTCCAGGAGGACGATAGTCTGCAGGACGAAGTGGCTCACAGAGATAAGAAGAGGTGCTCTGAGGCTGTGAGCTTCTCAACAGCAACCAAGAAAGAAGAGACTGTTGGTGATTTTCTCTCTTTGTCTGTAAAGTTGAACATTGTGATTTTTCCCTGTCACTCTGATAGTTCTTGGAAAGCATTTCTGGGAGAACTAATTCTTCAGCTTCTTCCTGAGCAGAGTTTAGATGATAATTTTTCTGAGAAGAGTTTTACCTTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATATATGTTCATTCTGAATGTGAGGATGTGGAGAAACAAGAAAAGGGACTGAAAGAATCAGTCAACATTTGTGACAAGGGCATTCGAGTGGAATCATCTTTCAGTGGTGAAATGCTAGAAGACTTGGGGTGGCTGCAAAAGAAGAAAAGAATAAAACTTTACCAAAGACCAGAAGGAAGGCACGTTATCAAGGTTGGAATTTATGTTCTGGAAGATGGCCTAGCAAAACTGGACTCTTTCAGTGATGCAAGTTCAAGAATGAAAAAGTTCAATCAACTCATGAAGAAGGTGATGGAAAAGTTATATAATTTTATTATTCCAGATGTATTGGGAGATGATGAGGAAGACTCAGATAGTGAGCCGGAGGGACAGGACATTGATGAGCTCTATCACTTTGTGAAGCAAACACATCAGCAGGAAACACAGTCTGTCCCCGTGGATGTGCAGCATCCTGCGCTGATGCCCGTGCTGAGACCCTACCAGAGAGAGGCTGTCAACTGGATGCTACAGCAAGAGCATTTCAGAAGCGCTCCTACTGATGAAAGTTCCCTGCACTTCTTGTGGCGAGAGATTATTACACCTGAGGGTTTGAAACTGTACTATAATCCATATACAGGCTGCATCACCCGTGAGCACCCACATTCTGGACCACAGTTGCTTGGTGGAATCCTAGCAGATGAGATGGGTCTTGGAAAGACAGTGGAGGTTTTGGCGCTCATTCTGACACATACTCGACAAGATGTCAAACAAGACACTCTCACTCTTCCTGAGGGGAAAGAGGTGAGCTATTTCATCCCGTCCCATTGTTTCAGAGGGTCAGTTAAGGACACGGAAAGTCAGAATATGGGATTAGAACCAAAAGAAAAAGTTCAGTGCCCCCCTACACGTGTGATGATCCTGACAGCTGTAAAAGAAATGAATGGGAAAAAAGGAGTTTCTATCCTTTCCATCTATAAGTATGTCAGTTCTATATATAGATACGACGTTCAACGAAACAGGAGTCTTCTGAAACGGATGCTGAAATGTTTAATTTTTGAAGGTCTTGTGAAACAGATCAAAGGTCATGGTTTCTCAGGGACCTTTACATTGGGGAAGAATTACAAGGAGGAGGATATATGCGATAAAACAAAAAAGCAGGCAGTAGGAAGTCCAAGGAAATTTCAGAAAGAACCCAGAAAATCAGGGAATAAGGACACAGATTCTGAATACTTGCCATCAAATACCTCCGACGATGATGATGACCCTTACTATTATTATTATAAGGCCAGGAAAAATCGTAGTAAACTGAAGAAAAAGCCTGTGCCATCCACAGAAAAAGGGAAAAGTCAGCCTGACACCGTTGCTGACATACAAGGTCACTGTCCAGCCGCAAGTGAGTCTGGAATTACTGATGTTGCCATGTCTGAAAGTACATGTGTCTATGAAGTCAAGCAAGAGCAAGAAGCTAAGGACCATTGTGAATCTCTAAACCCTGCCAGGAATGAGGGGCCACATTCTAACGTCCTGAGTCCCTATGATAATGCTGATTATCGCTTTGAGTGCATATGTGGTGAATTTGACCAGATAGACCGTAAGCCCCGCGTTCAATGCCTGAACTGCCACCTGTGGCAGCATGCAAAGTGTGTGAACTATAAAGAGGAAAACCTGAAAATTAAGCCTTTTTACTGCCCCCACTGCCTTGTGGCAATGGAGCCAGTGTCAACAAGAGCAACTCTGATCATCTCGCCAAGCTCCATCTGCCACCAGTGGGTGGACGAGATCAACCGGCATGTGAAGTCCTCATCTCTTCGAGTCTTGGTATATCAAGGAGTAAAGAAAGATGGCTTTTTACAACCTCACTTCTTAGCAGAACAAGATATAGTTATCATCACCTATGATGTCCTTCGTTCAGAACTGAACTACGTGGATATCCCACATAGCAATAGTGAGGATGGGCGTCGCCTACGGAACCAGAAGCGATACATGGCCATTCCCAGCCCCCTGGTGGCTGTGGAGTGGTGGAGGATCTGCCTCGATGAAGCCCAGATGGTTGAATGTCCTGCAGTGAAAGCTGCAGAAATGGCCCTGCGTTTGAGTGGGATTAATCGGTGGTGCATCAGCGGCACTCCAGTACAGAGAGGCCTGGAGGATCTTTTCGGGTTAGTGGTCTTTCTTGGTATCGAACCTTACTGTGTCAAACACTGGTGGTTTCGGCTCCTCTATCGCCCTTACTGCAAGAAGAATCCTCAGCATCTCTACAGCTTTATTGCCAAGATTCTGTGGAGGTCTGCAAAGAAAGACGTGATCGACCAAATCCAGATACCACCTCAGACCGAAGAAACACACTGGCTGCACTTTTCTCCGGTGGAAAGACACTTCTATCACCGGCAGCATGAGGTCTGCTGCCAGGATGCCGTGGTCAAACTCAGGAAGATTTCTGACTGGGCTCTGAAGCTCGGCAGCCTGGACCGAAGGACTGTCACCTCCATCCTGTACCCATTGCTGAGGCTCAGGCAGGCCTGCTGCCACCCACAGGCTGTGCGCGGGGAGTTCTTGCCCCTTCAAAAAAGCACCATGACAATGGAGGAGCTGCTGACATCGCTGCAGAAGAAATGTGGGACTGAATGTGAAGAAGCGCATCGGCAGCTCGTCTGTGCCCTCAATGGCTTAGCAGGCATCCACATCATTAAAGGCGAGTATGCTTTGGCAGCGGAACTGTACAGGGAAGTGTTACGTTCATCTGAGGAACACAAAGGAAAACTCAAAACTGATTCACTTCAAAGACTTCATGCTACCCATAACTTGATGGAATTATTGGTAGCCAAGCACCCAGGGATACCTCCTACCCTGCGAGATAGTAGACTTGAAGAAGAGGCCAAACAGCTGCAAGAGCACTACATGAGCAAGTGTAATACAGAAGTAGCTGAAGCCCACCAAGCTTTACACCCTGTGCAACAGACTGTACGCGAGCTCCAAAGAAAAATTCATTCTAATTCGCCTTGGTGGCTGAACGTAATCCATAGAGCAATAGAATTTTCTAAGGATGAGGAACTTGTTCAGCGAGTACGAAATGAAATAACCAGCAACTACAAGCAACAAACCGACAAGCTTTCTATGTCAGAGAAGTTCCACGACTGCAGAGGTCTTCAGTTCTTACTTACAACACAAATGGATGAACTAAGTAAATTCCAGAAGCTGGTAAGAGAAGCTGTCAAAAACCTAGAGAAACCTCCATCCCGTAATGTTATTGAATCTGCAACAATCTGTCACCTCCGACCAGCCAGACTTCCTCTCAACTGTTGTGTCTTCTGTAAAGCTGATGAATTGTTCACAGAGTATGAGTCAAAACTGTTTTCTAACACAGTCAAAGGCCAGACTGCAATATTTGAGGAGATGATAGAAGATGAGGAAGGTCTGGTGGATGATCGAGTACCTACCACCACCCGGGGCCTGTGGGCAATAAGTGAAACAGAGCGATCCATGAAAGCAATACTGTCATTTGCAAGATCACATAGATTGGATGCGGAATTCATAGATGAAGGAAGTGCCTCAATGGAACTCTTTGAAGCATGGAAGAAGGAATATAAGTTGCTTCATGAGTATTGGATGACCCTGAGGAATCGTGTATCTGCTGTCGATGAACTCGCAATGGCTACAGAACGACTAAGAGTGCGGCATCCTAAGGAGCCAAAGCCAAACCCACCTGTTCATCATATCATTGAGCCACATGAGGTAGAACAAAATCGTATAAAACTACTAAATGATAAAGCCGTTGCCACATCACAGCTTCAGAAGAAACTTGGACAGCTTCTTTACCTAACTAATTTGGAAAAGTCTCAAGACAAAACATCAGGAGGTATTAATCCAGAACCTTGTCCGATCTGTGCTCGACAGCTGGGAAAACAGTGGGCAGTGCTAACCTGTGGGCACTGTTTCTGCAATGAGTGCATCGCTATCATTATTGAGCAGTACAGTGTGGGGTCTCACAGAAGCTCCATTAAATGTGCCATCTGCCGCCAGACCACATCTCACAAAGAAATCTCCTATGTCTTCACCTCAGAGCGAGCAAGCCAAGAGGAGGACATCCCGGTGCAGGGTAGCCATTCCACAAAAGTAGAAGCGGTGGTCCGAACCCTCATGAGAATACAGCGCACAGACCCAGGAGCTAAAGCCCTTGTTTTCTCTACGTGGCAAGATGTATTAGATATTATTTCAAAAGCTCTTACCGACAACAACATGGAATTTGCACAAATCAGTCGTGTTAAGACATTTCAGGAGAACCTATCAGCGTTTAAACATGATCCCCAAATCAATATTTTGCTGCTGCCCCTGCACACAGGTTCTAATGGATTAACTATCATTGAAGCAACTCATGTTCTCTTGGTGGAGCCCATATTGAACCCTGCCCATGAGCTGCAGGCCATAGGGAGGGTGCACCGAATTGGACAGACAAAACCTACAATTGTACACAGATTCTTAATTAAAGCAACAATAGAAGAAAGAATGCAGGCCATGCTGAAAACTGCGGAGAGGAGTCATATGAACTCATCAGGGAAGCATTCCGAGGCCTCCGTTCTGACTGTGGCTGATCTGGCAGACCTGTTCACCAAAGAACCTGAAGAGCTCGAGTGA

Related Sequences

XP_004846069.1 Protein

Shprh PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X1 [Heterocephalus glaber]

Length: 1684 aa      
>XP_004846069.1
MSSRRKRAPPVKVDEEKQQQLRWNMHEDRRNEPLALTDDEQPCTGADCSPQCVQEDDSLQDEVAHRDKKRCSEAVSFSTATKKEETVGDFLSLSVKLNIVIFPCHSDSSWKAFLGELILQLLPEQSLDDNFSEKSFTLMSSESSNQFLIYVHSECEDVEKQEKGLKESVNICDKGIRVESSFSGEMLEDLGWLQKKKRIKLYQRPEGRHVIKVGIYVLEDGLAKLDSFSDASSRMKKFNQLMKKVMEKLYNFIIPDVLGDDEEDSDSEPEGQDIDELYHFVKQTHQQETQSVPVDVQHPALMPVLRPYQREAVNWMLQQEHFRSAPTDESSLHFLWREIITPEGLKLYYNPYTGCITREHPHSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDTLTLPEGKEVSYFIPSHCFRGSVKDTESQNMGLEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKFQKEPRKSGNKDTDSEYLPSNTSDDDDDPYYYYYKARKNRSKLKKKPVPSTEKGKSQPDTVADIQGHCPAASESGITDVAMSESTCVYEVKQEQEAKDHCESLNPARNEGPHSNVLSPYDNADYRFECICGEFDQIDRKPRVQCLNCHLWQHAKCVNYKEENLKIKPFYCPHCLVAMEPVSTRATLIISPSSICHQWVDEINRHVKSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPAVKAAEMALRLSGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWFRLLYRPYCKKNPQHLYSFIAKILWRSAKKDVIDQIQIPPQTEETHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALKLGSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLVAKHPGIPPTLRDSRLEEEAKQLQEHYMSKCNTEVAEAHQALHPVQQTVRELQRKIHSNSPWWLNVIHRAIEFSKDEELVQRVRNEITSNYKQQTDKLSMSEKFHDCRGLQFLLTTQMDELSKFQKLVREAVKNLEKPPSRNVIESATICHLRPARLPLNCCVFCKADELFTEYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRVPTTTRGLWAISETERSMKAILSFARSHRLDAEFIDEGSASMELFEAWKKEYKLLHEYWMTLRNRVSAVDELAMATERLRVRHPKEPKPNPPVHHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGINPEPCPICARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVFTSERASQEEDIPVQGSHSTKVEAVVRTLMRIQRTDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHMNSSGKHSEASVLTVADLADLFTKEPEELE