Details from NCBI annotation

Gene Symbol Samm50
Gene Name sorting and assembly machinery component 50 homolog (S. cerevisiae)
Entrez Gene ID 101716589

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SAMM50 ENSCPOG00000005200 (Guinea pig)

Gene Details

SAMM50 sorting and assembly machinery component

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004675, Guinea pig)

Protein Percentage 91.26%
CDS Percentage 86.12%
Ka/Ks Ratio 0.06092 (Ka = 0.0478, Ks = 0.7854)

SAMM50 ENSG00000100347 (Human)

Gene Details

SAMM50 sorting and assembly machinery component

External Links

Gene Match (Ensembl Protein ID: ENSP00000345445, Human)

Protein Percentage 90.23%
CDS Percentage 82.43%
Ka/Ks Ratio 0.06269 (Ka = 0.0561, Ks = 0.8953)

Samm50 ENSMUSG00000022437 (Mouse)

Gene Details

sorting and assembly machinery component 50 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023071, Mouse)

Protein Percentage 89.97%
CDS Percentage 83.98%
Ka/Ks Ratio 0.06913 (Ka = 0.0558, Ks = 0.8077)

Samm50 ENSRNOG00000011952 (Rat)

Gene Details

sorting and assembly machinery component 50 homolog (S. cerevisiae) (Samm50), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016520, Rat)

Protein Percentage 90.23%
CDS Percentage 83.72%
Ka/Ks Ratio 0.06598 (Ka = 0.0548, Ks = 0.8298)

Genome Location

Sequence Coding sequence

Length: 1170 bp    Location: 5197361..5136487   Strand: -
>XM_004845896.1
ATGACTGAAAATGCTGGAGACCCAATCCAGACAAGGAACATTTTCCAACTGTCTTCTTGTTTAATCTTTTTTATTTCCTTAGGTGATGACGCGCTTCCAAATGGGCTAGATGTCACCTTTGAAGTGACCGAGTTAAGGAGGCTGACAGGCAGTTACAACACCATGGTCGGAAATAATGAAGGCAGCATGGTCCTTGGCCTCAAACTCCCCAATTTGCTAGGACGTGCAGAAAAAGTGACTTTTCAGTTTTCCTATGGAACAAAAGAAACGTCCTACGGCCTGTCCTTCTTCAAACCACAGCCTGGGAACTTCGAGAGAAATTTCTCTGTAAACTTGTACAAAGTCACCGGACAGTTCCCGTGGAGCTCGCTTCGGGAGACAGACCGAGGAGTGTCAGCCGAGTACAGTTTCCCCATATGGAGGACCAGCCACAGCGTCAAGTGGGAGGGCGTGTGGCGGGAGCTGGGCTGCCTCTCCAGGACCGCGTCCTTCGCAGTGAGGAAAGAAAGCGGACACTCCCTGAAGTCGTCCCTCTCGCACACCATGGTCATTGATTCTCGGAATTCTTCCATCTTGCCTAGAAGAGGGGCCCTGCTGAAGGTGAACCAGGAGCTGGCAGGCTACACCGGTGGGGATGTGAGCTTCCTAAAGGAGGAGTTTGAGCTGCAGTTGAACAAGCAGCTCGTGTTGGACTCAGTGATCTGCGCGTCTCTGTGGGGTGGAATGTTGGTACCCATCGGGGACAAGCCATCCAGCATCGCTGACAGGTTTTACCTCGGAGGACCCACGAGTGTCCGAGGATTCAGCATGCACAGCATCGGCCCCCAGAGCGAAGGGGACTACCTGGGTGGCGAGGCGTACTGGGCCGGTGGCCTGCACCTGTACACCCCACTGCCCTTCCGGCCAGGCCAGGGCGGCTTCGGAGAGCTATTCCGAACCCACTTCTTCCTCAATGCAGGAAACCTCTGCAACCTCAACTACGGGGAAGGCCCCAGAGCCCACATCCGAAAGCTGGCTGAGTGCATCCGCTGGTCCTATGGCGCAGGCATTGTGCTCAGGCTGGGCAATATCGCAAGGCTGGAGCTGAACTACTGCATCCCCATGGGCGTGCAGCGGGGCGACAGGATATGCGATGGTGTCCAGTTTGGAGCTGGGATAAGGTTCCTGTAG

Related Sequences

XP_004845953.1 Protein

Samm50 PREDICTED: sorting and assembly machinery component 50 homolog [Heterocephalus glaber]

Length: 389 aa      View alignments
>XP_004845953.1
MTENAGDPIQTRNIFQLSSCLIFFISLGDDALPNGLDVTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYGLSFFKPQPGNFERNFSVNLYKVTGQFPWSSLRETDRGVSAEYSFPIWRTSHSVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHTMVIDSRNSSILPRRGALLKVNQELAGYTGGDVSFLKEEFELQLNKQLVLDSVICASLWGGMLVPIGDKPSSIADRFYLGGPTSVRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGNLCNLNYGEGPRAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCIPMGVQRGDRICDGVQFGAGIRFL