Details from NCBI annotation

Gene Symbol Tmem52b
Gene Name transmembrane protein 52B, transcript variant X3
Entrez Gene ID 101709361

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM52B ENSCPOG00000015464 (Guinea pig)

Gene Details

transmembrane protein 52B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013945, Guinea pig)

Protein Percentage 81.32%
CDS Percentage 84.62%
Ka/Ks Ratio 0.31245 (Ka = 0.1135, Ks = 0.3631)

TMEM52B ENSG00000165685 (Human)

Gene Details

transmembrane protein 52B

External Links

Gene Match (Ensembl Protein ID: ENSP00000298530, Human)

Protein Percentage 75.31%
CDS Percentage 79.22%
Ka/Ks Ratio 0.34508 (Ka = 0.1721, Ks = 0.4987)

Tmem52b ENSMUSG00000030160 (Mouse)

Gene Details

transmembrane protein 52B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032263, Mouse)

Protein Percentage 77.42%
CDS Percentage 79.21%
Ka/Ks Ratio 0.25229 (Ka = 0.1527, Ks = 0.6054)

Tmem52b ENSRNOG00000008485 (Rat)

Gene Details

transmembrane protein 52B (Tmem52b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011217, Rat)

Protein Percentage 75.26%
CDS Percentage 77.19%
Ka/Ks Ratio 0.227 (Ka = 0.1676, Ks = 0.7383)

Genome Location

Sequence Coding sequence

Length: 573 bp    Location: 26928806..26947581   Strand: +
>XM_004845888.1
ATGGAGGAGCAGGAGTCCAGCCAGATGGGGGTCCCCACCCGTGTCCTGATGGCCTCTGGCCTGGCTTGCTTCACCCAGCTTCCTGGAGCAAGATGTGAAGAGAGTTGTGTCAGTCCTGAACACTGCCTGACCACAGATTGGGTACATCTGTGGTATATATGGTTGCTGGTGGTAGTTGGTGTCCTGCTTCTGCTCTGCGGCCTGACTTCGGTGTGCTTCCGCTGCTGTCTGGTTCGCCAGCAAACTGGGGCAGATGAAAGTCAGCCACCCTACGAAGTGACCGTCATTGCTTTTGACCATGACAGCACTCTCCAGAACACTATCACTTCCCTGCAGTCCAGGTTTGGCTCTGCAGCTCGGAGAATTCTGGCGGTGACTCATTCCCACAGCTCCCTCGGCCAGCCGCCCTCCTCGGTGGACACCCTCCCAGGCTATGATGAAGCTCTTCACATGAGTCGCTTCACTGTGGCCAGGTGTGGACAGAAAGGACCTGAGTTATCCCCAGTGCCTGAGGAAAAGCAGCTGCCTCCAGTGGAGAAGGAATCTGCTGGAGTAGAGTACCCTTCACTGTGA

Related Sequences

XP_004845945.1 Protein

Tmem52b PREDICTED: transmembrane protein 52B isoform X3 [Heterocephalus glaber]

Length: 190 aa      View alignments
>XP_004845945.1
MEEQESSQMGVPTRVLMASGLACFTQLPGARCEESCVSPEHCLTTDWVHLWYIWLLVVVGVLLLLCGLTSVCFRCCLVRQQTGADESQPPYEVTVIAFDHDSTLQNTITSLQSRFGSAARRILAVTHSHSSLGQPPSSVDTLPGYDEALHMSRFTVARCGQKGPELSPVPEEKQLPPVEKESAGVEYPSL