Sequence details NCBI ID: XM_004845759.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol C2cd5
Gene Name C2 calcium-dependent domain containing 5, transcript variant X4
Entrez Gene ID 101724525

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

C2CD5 ENSCPOG00000002611 (Guinea pig)

Gene Details

C2 calcium-dependent domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002372, Guinea pig)

Protein Percentage 93.57%
CDS Percentage 91.71%
Ka/Ks Ratio 0.17071 (Ka = 0.0409, Ks = 0.2396)

C2CD5 ENSG00000111731 (Human)

Gene Details

C2 calcium-dependent domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000334229, Human)

Protein Percentage 98.0%
CDS Percentage 94.13%
Ka/Ks Ratio 0.03684 (Ka = 0.0094, Ks = 0.2564)

C2cd5 ENSMUSG00000030279 (Mouse)

Gene Details

C2 calcium-dependent domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107388, Mouse)

Protein Percentage 96.36%
CDS Percentage 87.73%
Ka/Ks Ratio 0.02887 (Ka = 0.0175, Ks = 0.6045)

C2cd5 ENSRNOG00000014382 (Rat)

Gene Details

C2 calcium-dependent domain containing 5 (C2cd5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059174, Rat)

Protein Percentage 96.26%
CDS Percentage 87.65%
Ka/Ks Ratio 0.03028 (Ka = 0.0183, Ks = 0.6054)

Genome Location

Sequence Coding sequence

Length: 3189 bp    Location: 16261774..16364545   Strand: +
Raw sequence   
>XM_004845759.1
ATGCCCGGGAAGCTGAAGGTGAAAATCGTGGCCGGACGCCATTTGCCTGTGATGGACCGTGCTAGTGACCTGACTGATGCCTTTGTGGAGGTAAAATTTGGTAATACTACCTTTAAAACAGATGTGTACCTCAAGTCACTCAACCCTCAGTGGAACTCAGAATGGTTTAAATTTGAGGTGGATGATGAAGATCTGCAAGATGAACCTCTGCAGATCACAGTTCTTGACCACGATACTTACAGTGCAAATGATGCCATTGGTAAAGTGTACATTGATATCGATCCTCTACTGTATAGTGAAGCTGCTACAGTCATCTCAGGATGGTTTCCAATTTATGACACCATACATGGTATCCGTGGAGAAATCAATGTGATTGTCAAAGTAGACCTCTTCAATGATTTAAATAGATTTAGACAGTCATCGTGTGGAGTCAAATTCTTTTGCACAACATCTATACCAAAGTGCTACCGAGCTGTAATAATTCATGGATTTGTAGAAGAACTGGTGGTCAATGAAGACCCAGAGTATCAATGGATTGATAGAATTCGCACACCAAGGGCATCAAATGAGGCCAGACAGAGACTCATTTCTTTAATGTCAGGTGAACTGCAGAGGAAGATTGGCCTGAAAGTACTTGAAATGAGAGGAAATGCAGTTGTCGGGTACTTACAGTGTTTTGATCTGGAGGGAGAGTCTGGGTTAGTGGTACGAGCCATAGGAACAGCGTGTACTCTGGATAAATTAAGTAGCCCAGCAGCATTCCTTCCTGCATGTAATTCCCCATCCAAAGAAATGAAGGAGATTCCCTTCAATGAAGATCCCAACCCCAATACTCACTCATCAGGACCCTCAACCCCTCTGAAAAACCAAACTTATTCCTTTTCACCTTCCAAGTCCTACAGTCGACAGTCCTCTTCTTCTGACACAGATTTGAGTTTGACACCCAAAACTGGAATGGGAAGTGGTAGTGCTGGAAAAGAAGGAGGGCCATTTAAAGCTCTTTTAAGACAGCAGACTCAGTCAGCATTGGAACAGAGGGGAGGATCACCTCATAGGTTCTGTAAACGGCGGGAATTTCCATTTTTTACTTTGACGGCATTTCCTCCTGGATTTCTTGTGCATGTCGGTGGTGTTGTTAGTGCACGCTCTGTGAAGCTCTTGGATCGCATCCACAATCCTGATGAACCAGAAACTCGGGATGCATGGTGGGCAGAAATCAGACAAGAAATAAAATCACATGCTAAAGCACTTGGCTGTCATGCTGTCGTGGGCTACAGTGAATCAACTAGCATCTGTGAAGAGGTCTGTATTTTATCAGCATCCGGCACAGCGGCAGTACTGAATCCTCGATTTCTGCAGGATGGCACCGTGGAGGGCTGTTTGGAACAGAGGCTTGAAGAAAATTTGCCTGTAGGCTGTGGATTTTGCCATATACCATATGATGAACTGAATATGCCATTTCCAGCTCATCTCACATATTGCTACAACTGTAGGAAACAAAAAGTTCCTGATGTTCTCTTTACAACGATAGACCTCCCCACAGATGCAGCAGTCGTTGGAAAGGGTTGTCTTATTCAGGCAAGGTTATGTCGCTTAAAAAAGAAAGCACAAGCAGAAGCAAATGCTACAGCTATCAGTAATCTCCTTCCTTTTATGGAATATGAAGTTCATACTCAGCTAATGAATAAGCTGAAACTCAAAGGGATGAATGCTTTGTTTGGGCTAAGAATTCAGATCACAGTGGGTGAAAATATGTTGATGGGCTTAGCGTCTGCCACAGGTGTGTATTTAGCAGCTTTACCAACACCTGGTGGTATTCAGATTGCGGGGAAGACTCCTAATGATGGCTCCTATGAACAGCATATCTCTCATATGCAGAAGAAGATAAATGACACAATTGCTAAGAACAAAGAGTTATATGAAATCAATCCTCCAGAGATATCTGAAGAGGTTATAGGATCACCCATCCCAGAACCCAGACAACGTTCAAGACTTCTGAGATCTCAGTCAGAAAGCTCTGATGAAGTTATAGAATTGGATCTTTCCCATGGAAAAAAAGATGCTTTTGTTTTGGAGATTGATGATACTGATGCCATGGAAGATGTCCATTCTCTACTTACTGATGTTCCTCCTCCTTCAGGCTTTTATAGTTGTAATACAGAAATTATGCCTGGTATAAATAACTGGACCTCAGAAATACAGATGTTCACGTCAGTGAGAGTAATCAGATTAAGCAGCCTTAACCTGACTAATCAAGCTCTCAATAAGAATTTTAATGATCTGTGTGAAAATTTGCTCAAGAGCCTGTATTTTAAACTACGATCTATGATTCCCTGCTGCCTTTGTCATGTAAATTTCACAGTATCTCTGCCTGAAGATGAATTAATTCAGGTTACAGTCACAGCAGTTGCAATAACTTTTGACAAAAATCAGGCTTTACAGACCATAAAAACACATGTTGAAAAATCACTACAACGAGCTTCTACAGACAATGAAGAACTTCTACAGTTTCCACTGGAACTTTGTTCAGATTCACTTCCTCCCCATCCTTTTCCACCAGCTAAAGAACACCTGGAGAGTGCCAGTTCTAACTCAGGTATACCAGCTGCACAGAGAGCAACGTCAGTTGATTACAGTTCCTTTGCAGACAGATGCAGCAGCTGGATAGAGCTCATTAAACTGAAAGCTCAGACCATAAGGCGTGGATCAATTAAGACAACTGTGACAGTTGAAAAAGCAAGTCCAGTGGCTGAAGGAAATTTCCGGAATCGTTCTGCTCCACCTTGTGCAAATTCCACAGTTGGAGTTGTTAAGATGACACCTCTTTCTTTCATTCCGGGAGCAAAAATAACTAAATATCTTGGGATAATTAACATGTTTTTTATTCGGGAAACCACTTCTCTTCGTGAGGAAGGGGGAGTCAGTGGTTTTCTTCATGCTTTCATTGCTGAAGTGTTTGCAATGGTGCGTGCTCATGTTGCTGCATTAGGCGGGAATGCTGTTGTCTCCTACATCATGAAGCAGTGTGTCTTCATGGAGAATCCAAATAAAAACCAGGCACAGTGTCTTATAAATGTAAGCGGTGATGCAGTGGTTTTTGTTCGTGAATCTGACTTAGAAGTAATATCAACTCAGCAACCTACTGCCAACTGTCAGCCATTATGTACAGGAGGAGAAGTAACAACTTGA

Related Sequences

XP_004845816.1 Protein

C2cd5 PREDICTED: C2 domain-containing protein 5 isoform X4 [Heterocephalus glaber]

Length: 1062 aa      View alignments
>XP_004845816.1
MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVIVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWIDRIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIGTACTLDKLSSPAAFLPACNSPSKEMKEIPFNEDPNPNTHSSGPSTPLKNQTYSFSPSKSYSRQSSSSDTDLSLTPKTGMGSGSAGKEGGPFKALLRQQTQSALEQRGGSPHRFCKRREFPFFTLTAFPPGFLVHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSICEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENLPVGCGFCHIPYDELNMPFPAHLTYCYNCRKQKVPDVLFTTIDLPTDAAVVGKGCLIQARLCRLKKKAQAEANATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGLASATGVYLAALPTPGGIQIAGKTPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISEEVIGSPIPEPRQRSRLLRSQSESSDEVIELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPSGFYSCNTEIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTIKTHVEKSLQRASTDNEELLQFPLELCSDSLPPHPFPPAKEHLESASSNSGIPAAQRATSVDYSSFADRCSSWIELIKLKAQTIRRGSIKTTVTVEKASPVAEGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAVVFVRESDLEVISTQQPTANCQPLCTGGEVTT