Details from NCBI annotation

Gene Symbol Sox5
Gene Name SRY (sex determining region Y)-box 5, transcript variant X2
Entrez Gene ID 101721694

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SOX5 ENSCPOG00000015686 (Guinea pig)

Gene Details

SRY (sex determining region Y)-box 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014145, Guinea pig)

Protein Percentage 99.48%
CDS Percentage 96.16%
Ka/Ks Ratio 0.01496 (Ka = 0.0024, Ks = 0.1594)

SOX5 ENSG00000134532 (Human)

Gene Details

SRY (sex determining region Y)-box 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000398273, Human)

Protein Percentage 99.21%
CDS Percentage 95.5%
Ka/Ks Ratio 0.02222 (Ka = 0.0037, Ks = 0.1685)

Sox5 ENSMUSG00000041540 (Mouse)

Gene Details

SRY-box containing gene 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047567, Mouse)

Protein Percentage 96.46%
CDS Percentage 90.91%
Ka/Ks Ratio 0.04515 (Ka = 0.0173, Ks = 0.3824)

Genome Location

Sequence Coding sequence

Length: 2292 bp    Location: 14986148..15378465   Strand: +
>XM_004845752.1
ATGCTTACTGACCCTGATTTACCTCAGGAGTTTGAAAGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGATGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCGTTTGCCTCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAAAGTGGCGAGTCCTTGTCTAGTACGGCCCTGGGAACCCCTGAACGACGCAAGGGCAGCTTAGCTGATGTAGTGGACACCCTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCCGAAGAAACCCCCAGCATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCAGGGAACTTTGGCGAAATAAAAGGGACTCCCGAAAGCCTAGCTGAGAAAGAGAGGCAGCTCATGGGTATGATCAACCAGCTGACCAGTCTGCGGGAGCAGCTATTGGCTGCGCACGATGAGCAGAAGAAACTGGCTGCATCTCAGATTGAGAAACAGCGCCAGCAAATGGAGCTGGCCAAGCAGCAGCAAGAGCAGATTGCAAGACAACAGCAGCAGCTTCTGCAGCAACAACACAAAATCAATTTGCTTCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATACCCGTATTCCCTCCTGATCAACGGACGCTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTTCCTCCTGGCTTCAGCTATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCTGCAGCAACACCAGGCTTAGGCCCTCTCCAACTGCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTCCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTATCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGCCCACCACCCAAAAGCAAGGATGAAGTGGCACAGCCACTGAACCTATCAGCTAAACCCAAGACCTCTGATGGCAAATCACCCACATCACCCACCTCTCCCCATATGCCAGCTCTGAGAATAAACAGTGGGGCAGGCCCCCTCAAAGCCTCTGTCCCAGCAACGTTAGCTAGTCCTTCGGCCAGAGTTAGCACAATAGGTTATTTAAATGATCACGATGCTGTCAGTAAGGCAATCCAGGAAGCTCGACAGATGAAGGAGCAACTTCGGCGGGAACAACAGGTGCTTGATGGGAAGGTGGCTGTTGTGAATAGTCTAGGTCTCAATAACTGCCGGACAGAAAAGGAGAAAACAACACTGGAAAGTCTGACTCAGCAATTGGCAGTTAAACAGAATGAAGAAGGAAAATTTAGCCATGCAATGATGGATTTCAATATGAGTGGAGATTCCGATGGAAGTGCTGGAGTTTCCGAGTCAAGAATTTATAGGGAATCCAGGGGGCGTGGTAGCAATGAACCCCACATAAAACGTCCAATGAATGCTTTCATGGTGTGGGCTAAAGATGAACGGAGGAAAATCCTTCAAGCCTTTCCTGACATGCACAACTCCAACATCAGCAAGATACTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCCATATTACGAGGAGCAAGCCCGTCTCAGCAAGCAGCACCTGGAAAAGTACCCTGACTACAAGTACAAGCCCAGGCCGAAGCGCACCTGCCTCGTGGACGGCAAAAAGCTGCGCATCGGCGAATACAAGGCAATCATGCGGAACAGGCGGCAGGAAATGCGGCAGTACTTCAACGTTGGGCAACAAGCACAGATCCCCATGGCCACCGCCGGCGTTGTGTACCCCGGAGCCATCGCCATGGCTGGGATGCCCTCGCCGCACCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGCCCAGAACCCGGGATGCCTGTCATTCAGAGCACTTACGGCGTCAAAGGAGAGGAGCCACACATTAAAGAAGAGATCCAGGCGGAGGACATCAATGGAGAAATCTATGATGAGTACGATGAGGAGGAGGATGATCCAGACGTAGATTATGGGAGTGACAGTGAAAACCATATCACAGGACAAGCCAACTGA

Related Sequences

XP_004845809.1 Protein

Sox5 PREDICTED: transcription factor SOX-5 isoform X2 [Heterocephalus glaber]

Length: 763 aa     
>XP_004845809.1
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFASHNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPATLASPSARVSTIGYLNDHDAVSKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPMATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHITGQAN