Details from NCBI annotation

Gene Symbol Casc1
Gene Name cancer susceptibility candidate 1, transcript variant X1
Entrez Gene ID 101719575

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CASC1 ENSCPOG00000005699 (Guinea pig)

Gene Details

cancer susceptibility candidate 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005138, Guinea pig)

Protein Percentage 80.54%
CDS Percentage 85.43%
Ka/Ks Ratio 0.35698 (Ka = 0.1187, Ks = 0.3326)

CASC1 ENSG00000118307 (Human)

Gene Details

cancer susceptibility candidate 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000379310, Human)

Protein Percentage 77.16%
CDS Percentage 83.75%
Ka/Ks Ratio 0.34525 (Ka = 0.1365, Ks = 0.3952)

Casc1 ENSMUSG00000043541 (Mouse)

Gene Details

cancer susceptibility candidate 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000062279, Mouse)

Protein Percentage 65.08%
CDS Percentage 70.72%
Ka/Ks Ratio 0.21379 (Ka = 0.2485, Ks = 1.1623)

Casc1 ENSRNOG00000027630 (Rat)

Gene Details

cancer susceptibility candidate 1 (Casc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000035058, Rat)

Protein Percentage 67.88%
CDS Percentage 70.58%
Ka/Ks Ratio 0.16723 (Ka = 0.2321, Ks = 1.3877)

Genome Location

Sequence Coding sequence

Length: 2157 bp    Location: 13855392..13932092   Strand: +
>XM_004845745.1
ATGGGTCCCAAAGCAAGAAAGTCTGGCAATAAGAAAAAGACAATCACTAAAGCAGAACAACTGAAGCAGCTACAAGAGGAAGAGGAGAAACGACTGAGAGAGGAAGAGGAAGCCCGTTTGAAATTTGAGAAAGAAGAACTGGAAAGGCTTGAAAAACAGCGGATTGAGAAAGAAAAATGGCAACAACTTGAAAAAAAAGATCTAGAAAGGAGACCTGAAGAACTTGAGGAACTTTATTCACTAGAGGAATGTTTTCCTGAAGCAGAGAAATTGAAACAGGATAGTAGGTCACTTTCTCAGTGGAAACGCTACATTCAGTGTGATGGGAGTCCTGATCCTTCTGTACCCCAAGAAATGAATACTTTCATTAGCTTGTGGAAAGAGGAAACAAATGAAACTTTTGAGATAGTGATTGAGAAGAGCAAACTAGTGCTACAGTTAATTGAGAAATTGAAATTAATGTTATTGGAAACTGCGCCACGTGATTTGAGAGACAAAAACATAATACAATATGAAGGATCAATTTCACAGCTTCAGGAGCTCCTTCATCTTAAGTTTAACATAGCCACGGAAATACTGCTCAGACAAGCGAGTACTTTGGCAGATCTGGACACTGGAAATATGGAAAAAATCATTCAAGATGAAAATGTTACCCTGTATGTGTGGGCAAACCTCAAGAAGAACCCAAGGTACAAAAGTGTGAGATTCTCTGACACTCAAACTGGATTTGAAATTCCAAGGATATTAGCGACGAGTGACATCGCTCTCCGCCTCCTCCACACTCACTACGACCACGTGACTCCACCGCAAGCTGCTCCCGCACCGTCTCCACAGCACACTTCCGCAGCATCTGAGCTTTTCAAGAGTGAAACTAAGAGCACAACAGAAGCAGCCAGCCAGGAGGCCCAGGAAGACTCCAAACCACAAGAGAGAGGGTCTGTCTTCATTCAGGAGGGAGAAATAAAAGTTGACGAGCAAGTTGATTCTGAGACTTCTGTCAAGAAAGAATCGAAAGCCACAGAATGTGAACTGGAGATGAAATTACTAAGTGAAACGGTTGCAGCAGCACAGCTGAACCTGATAAAGAATGCTCCTGAAAAGCCAGAAGTCTCTGAAAGCAAGGAGGTGGATTTATGCCAGTTCACCATTCTGGGTGGCGTGTACCACTTGGATATTTTGGAGCTCCCCCCACAGTGTAAACCAGTGAAAGGCTGGATGATGGTGGAGATACTCAAAGAAGGATTACAGAAATTTACATATCCTCCAGAAATCACAGAAAACTTTGAAACAGAAAATGCTTTTCCGCCTATAGAAGTCACTCTTCAGGTTCAGGAGAAAGTAGCCTTTTTTGAGGAACCTATGGTCGCAAGGTGGGATGCTAAAGGTAAATACTGGCGAACTGATGGCATTAGTGACGTGTATTACACCCCAGAAAAAAAACTTATATCATTCAACCTGGAAACCTTTGGCCCTGTTACCTTGATGCAAGACACTCATATTAACATGCCGTACCAGTCGTGGGAACTACAACCACTTGATGTGAATAAAGCACTTCTGACTGTGACAACAGTATTTACTGAGATTCAGATACAAATTAAGGAAAACCTCTGCATGTTGGCGTCAATCAAAGTAAAGGACAAAGGACCCTGGTCTGTGTTGGAAGGAAAGTGGATGACTCCTATTCCTTTCATTAGTGCTCTGAAAGAAACTGGGCTGAATATCTTCCCGACTGCATACTCTCATTTTTATGTTGTCATAAATAATAAGGTTCCGTTGGTGGAAATGAAAGCTTATCGGCAGATGGCCCTGCTGAGTTCTGCTATTGCCTTTGGGTGGAGCAAGTGGAATACACTATGTGATTCTACAAATGTTGTGTTTAAGGTGAGAGAGCACCTGACTGAGGAGCACACTGACATCCCTAACTGGGCCCTATTTATGTTCAGTGGGGACAGAGCAAGGAGGCTCAAGATAAACGAAGAGAGCGAGTCATTCTCTGAAGCGCTTGGAGAAGAAACTGAGTTGCATTCCACTTTGTATCACATGGTAAAGGATTTTGCTTCCAAGGAAGCCATAGAGAAAGTCAGAAGTTCCAGCTGCCAGTTTATAGACTCAGTTTGCCACATGCTTCTCTCTACCAGGGTGCTCAGCTATTCTTAA

Related Sequences

XP_004845802.1 Protein

Casc1 PREDICTED: cancer susceptibility candidate protein 1 homolog isoform X1 [Heterocephalus glaber]

Length: 718 aa      View alignments
>XP_004845802.1
MGPKARKSGNKKKTITKAEQLKQLQEEEEKRLREEEEARLKFEKEELERLEKQRIEKEKWQQLEKKDLERRPEELEELYSLEECFPEAEKLKQDSRSLSQWKRYIQCDGSPDPSVPQEMNTFISLWKEETNETFEIVIEKSKLVLQLIEKLKLMLLETAPRDLRDKNIIQYEGSISQLQELLHLKFNIATEILLRQASTLADLDTGNMEKIIQDENVTLYVWANLKKNPRYKSVRFSDTQTGFEIPRILATSDIALRLLHTHYDHVTPPQAAPAPSPQHTSAASELFKSETKSTTEAASQEAQEDSKPQERGSVFIQEGEIKVDEQVDSETSVKKESKATECELEMKLLSETVAAAQLNLIKNAPEKPEVSESKEVDLCQFTILGGVYHLDILELPPQCKPVKGWMMVEILKEGLQKFTYPPEITENFETENAFPPIEVTLQVQEKVAFFEEPMVARWDAKGKYWRTDGISDVYYTPEKKLISFNLETFGPVTLMQDTHINMPYQSWELQPLDVNKALLTVTTVFTEIQIQIKENLCMLASIKVKDKGPWSVLEGKWMTPIPFISALKETGLNIFPTAYSHFYVVINNKVPLVEMKAYRQMALLSSAIAFGWSKWNTLCDSTNVVFKVREHLTEEHTDIPNWALFMFSGDRARRLKINEESESFSEALGEETELHSTLYHMVKDFASKEAIEKVRSSSCQFIDSVCHMLLSTRVLSYS