Details from NCBI annotation

Gene Symbol Sspn
Gene Name sarcospan, transcript variant X1
Entrez Gene ID 101717409

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SSPN ENSCPOG00000022281 (Guinea pig)

Gene Details

sarcospan

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017737, Guinea pig)

Protein Percentage 90.91%
CDS Percentage 93.11%
Ka/Ks Ratio 0.26747 (Ka = 0.0458, Ks = 0.1714)

SSPN ENSG00000123096 (Human)

Gene Details

sarcospan

External Links

Gene Match (Ensembl Protein ID: ENSP00000242729, Human)

Protein Percentage 90.95%
CDS Percentage 91.36%
Ka/Ks Ratio 0.187 (Ka = 0.0486, Ks = 0.26)

Sspn ENSMUSG00000030255 (Mouse)

Gene Details

sarcospan

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032383, Mouse)

Protein Percentage 83.33%
CDS Percentage 82.87%
Ka/Ks Ratio 0.13035 (Ka = 0.0924, Ks = 0.7091)

Sspn ENSRNOG00000001807 (Rat)

Gene Details

sarcospan (Sspn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002465, Rat)

Protein Percentage 84.26%
CDS Percentage 83.18%
Ka/Ks Ratio 0.13786 (Ka = 0.0925, Ks = 0.6709)

Genome Location

Sequence Coding sequence

Length: 732 bp    Location: 12936263..12897434   Strand: -
>XM_004845738.1
ATGGGCGACGACAAGCAGCCCCGCGGCCCGCAGAGGCAGGGGGGGCCGCCGGCCGCGGACGCCGCCGGGCCCGACGACGCGGGGCCGAAGAAGGGCAAAGGGGCCCTCAAGGCGTGCGGGGAGGAGGAGGCCCGGACGTGCTGCGGCTGCCGGTTCCCGCTGCTGCTCGCCCTACTGCAGCTGGCCCTGGGCATCGCCGTGACCGTGGTGGGCTTCCTCATGGCCAGCGTCAGCTCCTCCCTGCTAGTCAGAGACACTCCATTTTGGGCTGGGATCATTGTCTGTTTAGTGGCCTATCTTGGTTTGTTTATGCTTTGTGTCTCGTATCAAGTTGATGAACGGACATGTATCCAGTTTTTTATGAAACTGGTGTACTTTCTGCTGAGTGCCCTGGGCCTGACAGTGTGTGTGCTGGCCGTGGCGTTCGCTGCCCACCACTATTTGCAACTCACACAGTTTACCTGTGAGCCCGCACTTGACTCCTGCCAGTGCAAACTGCCCTCCTCCGAGCCACTCAGCAGGACCTTTGTTTACCGGGATGTGACTGACTGTGCCAGCGTCACTGGCACTTTCAAACTCTTCTTACTCACCCAGATGGTCCTTAACCTGGTCTGTGGCCTTGTGTGCTTGCTGGCCTGCTTTGTGATGTGGAAACACAGGTACCAGGTCTTTTATGCGGGTGTGAGGATGTGCTCCCTCACAGCTTCCGAAGGCCAGCAGCAAAAGGCCTAA

Related Sequences

XP_004845795.1 Protein

Sspn PREDICTED: sarcospan isoform X1 [Heterocephalus glaber]

Length: 243 aa      View alignments
>XP_004845795.1
MGDDKQPRGPQRQGGPPAADAAGPDDAGPKKGKGALKACGEEEARTCCGCRFPLLLALLQLALGIAVTVVGFLMASVSSSLLVRDTPFWAGIIVCLVAYLGLFMLCVSYQVDERTCIQFFMKLVYFLLSALGLTVCVLAVAFAAHHYLQLTQFTCEPALDSCQCKLPSSEPLSRTFVYRDVTDCASVTGTFKLFLLTQMVLNLVCGLVCLLACFVMWKHRYQVFYAGVRMCSLTASEGQQQKA