Sequence details NCBI ID: XM_004845673.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tmprss6
Gene Name transmembrane protease, serine 6, transcript variant X3
Entrez Gene ID 101726737

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMPRSS6 ENSCPOG00000004538 (Guinea pig)

Gene Details

transmembrane protease, serine 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004089, Guinea pig)

Protein Percentage 90.18%
CDS Percentage 90.7%
Ka/Ks Ratio 0.11824 (Ka = 0.0479, Ks = 0.4051)

TMPRSS6 ENSG00000187045 (Human)

Gene Details

transmembrane protease, serine 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000334962, Human)

Protein Percentage 89.21%
CDS Percentage 87.45%
Ka/Ks Ratio 0.07465 (Ka = 0.0533, Ks = 0.7136)

Tmprss6 ENSMUSG00000016942 (Mouse)

Gene Details

transmembrane serine protease 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000017086, Mouse)

Protein Percentage 84.91%
CDS Percentage 83.94%
Ka/Ks Ratio 0.09751 (Ka = 0.0798, Ks = 0.8185)

Tmprss6 ENSRNOG00000000184 (Rat)

Gene Details

transmembrane protease, serine 6 (Tmprss6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000200, Rat)

Protein Percentage 84.79%
CDS Percentage 83.42%
Ka/Ks Ratio 0.08752 (Ka = 0.0788, Ks = 0.9005)

Genome Location

Sequence Coding sequence

Length: 2394 bp    Location: 10693909..10727270   Strand: +
Raw sequence   
>XM_004845673.1
ATGCCCAAGGCTGAGGCCCCCCAGGTTGCTGGCGGGCAGGGTGATGGAGGCGAGAGTGAGGAAGCAGAGCCCGAGGGGATGTTCAAGGCCTCAAAGAGGAAAGCCCGGGACTACATGCGCCTGGCGCCCCTGTCACTGGCCCTGGTGGTGCTGGCTTCAGCGGGGGTGATGCTCTGGTATTTCCTAGGATACAGGGCCGAGGGCACGGTCAGCCAGGTGTACGCCGGCAGCCTCCGGGTGCTCAATCGCCACTTCTGTCAGGACCTGACCCGCCGGGAGTCCAGCACCTTCCGCAGCGAAGCCGCCAAAGCCCAGAGGATGCTCAAAGAGCTCATTGGCAGCACCCGCCTGGGTACTTACTACAACTCCAGCTCCGTCTACTCCTTCGGTGAGGGATCCCTCACCTGCTTCTTCTGGTTCATCCTGCAAATCCCAGAGCACCTCCAGCCCACGCTGAGCCCCGAGATGGTGCGGGCACTGCTGGTGGAGGAGCTGCTGTCCGTGGCCAACAGCTCGGTCCCTGTCTCCTACATGGCTGAGTATGAGGTGGACCCTGAGGGCCTCGTGATCCTGGAAGCCAGCGTAAAAGACATAGTCACGCTGAATTCCACGCTGGGCTGTTACCGCTACAGCTACGTGGGCCAGGGGCAGGCCCTTCAGCTGAAGGGCCCCGACCAGCTGGCCTCCAGTTGCCTGTGGCACCTGCAGGGTCCCCAAGAGCTCATGCTCAAGGTGCGACTGGAGTGGACCCTGGCCGAGTGCCGAGACCGCCTGGCCATGTATGACGCAGCTGGGCCGCTGGAAAAGAAGCTCATTACCTCGGTATATGGCTGCAGCCGCCAGGAGCCCGTGCTGGAAGTGCTGGCCTCAGGCTCCATCATGGCAGTGGTCTGGAAGAAAGGTCTGCACAGCTACACTGACCCCTTCGTGCTCTCTGTGCAGCCTGTGGCCTTTGAGGCCTGCCAGGTGAACCTGACGCTGGAGGGCCGGCTGGACCCACAGGGTGCCCTCAGCACACCCTACTTCCCCAGCTACTACTCTCCCAGCACCCACTGCTCCTGGCACCTCACGGTGCCATCTCTGGACTACGGCTTGACCCTCTGGTTTGACGCCTATGCTTTGAGGAGACAGAAGTACGGCCTGCCTTGCACCCAGGGACAGTGGACGATACAGAACAGGAGGCTGTGTGGCTTGCGCACCCTGCAGCCCTACGCTGAGAGGATTCCTGTGGTGGCCACAGCTGGGATCACCATCAACTTCACGTCACAGAGCCCCCTGACAGGGCCAGGTGTGCGGGTGCACTATAGCCTGTACAACCAGTCGGACCCCTGCCCTGGTGAGTTCCTCTGCTCCGTGAATGGACTCTGTGTCCCTGCCTGCGATGGGATCAAGGACTGCCCCAATGGCCTAGATGAGAGAAACTGTGTTTGCAGAGCCACATTCCAGTGCCAAGAAGACAGCACTTGCATCTCCCTGCCCCGAGTCTGTGACCGGCAGCCTGACTGTCTCAATGGCAGTGATGAGGAGCAATGCCAAGAAGGAGTGCCTTGTGGGACCTTCACCTTCCAGTGTAAGGACCGCAGCTGTGTGCGGAAGCCCAACCCTCAGTGTGACGGGTGGCCGGACTGCAAGGATGGCTCAGACGAGCTCCACTGCAACTGTGGCCTCCAGGGCCCCTCCAGCCGCATCGTAGGCGGGGCCGTGTCCTCTGAGGGCGAGTGGCCGTGGCAGGCCAGCCTCCAGGTTCGGAGCCGACACATCTGTGGGGGCGCCCTCATTGCTGACCGCTGGGTGATCACAGCTGCCCACTGCTTCCAGGAGGACAGCATGGCCTCCCCGGCGCTGTGGACCGTGTTCCTGGGCAAGATGCGGCAGAATGCCCGCTGGCCCGGTGAGGTGTCCTTCAAGGTGAGCCGCCTGCTCCTGCACCCGTACCACGAGGAGGACAGCCACGACTACGACGTGGCCCTGCTGCAGCTCGACCACCCGGTGGTGCGCTCCGCCAACGTGCGCCCGGTCTGCCTGCCTGCGCGTTCCCACTTCTTTGAGCCGGGCCTGCACTGCTGGATCACAGGATGGGGCGCTCTGCGAGAGGGCGGCCCCACCAGCAATGTCCTGCAGAAAGTGGACGTGCAGCTGGTTGTGCAGGACCTGTGCAGCGAGGCCTATCACTACCAGGTGACACCACGCATGCTGTGTGCTGGCTACCGCAAGGGCAAGAAGGATGCATGCCAGGGTGACTCTGGTGGCCCGCTGGTGTGTAAGGAGCCCAGTGGCCGCTGGTTCCTGGCAGGGCTGGTCAGCTGGGGCCTGGGCTGTGGCCGGCCCAACTACTTCGGTGTCTACACTCGCATCACAGGTGTGATTGGCTGGATCCAGCAGGTGCTGACCTGA

Related Sequences

XP_004845730.1 Protein

Tmprss6 PREDICTED: transmembrane protease serine 6 isoform X3 [Heterocephalus glaber]

Length: 797 aa      View alignments
>XP_004845730.1
MPKAEAPQVAGGQGDGGESEEAEPEGMFKASKRKARDYMRLAPLSLALVVLASAGVMLWYFLGYRAEGTVSQVYAGSLRVLNRHFCQDLTRRESSTFRSEAAKAQRMLKELIGSTRLGTYYNSSSVYSFGEGSLTCFFWFILQIPEHLQPTLSPEMVRALLVEELLSVANSSVPVSYMAEYEVDPEGLVILEASVKDIVTLNSTLGCYRYSYVGQGQALQLKGPDQLASSCLWHLQGPQELMLKVRLEWTLAECRDRLAMYDAAGPLEKKLITSVYGCSRQEPVLEVLASGSIMAVVWKKGLHSYTDPFVLSVQPVAFEACQVNLTLEGRLDPQGALSTPYFPSYYSPSTHCSWHLTVPSLDYGLTLWFDAYALRRQKYGLPCTQGQWTIQNRRLCGLRTLQPYAERIPVVATAGITINFTSQSPLTGPGVRVHYSLYNQSDPCPGEFLCSVNGLCVPACDGIKDCPNGLDERNCVCRATFQCQEDSTCISLPRVCDRQPDCLNGSDEEQCQEGVPCGTFTFQCKDRSCVRKPNPQCDGWPDCKDGSDELHCNCGLQGPSSRIVGGAVSSEGEWPWQASLQVRSRHICGGALIADRWVITAAHCFQEDSMASPALWTVFLGKMRQNARWPGEVSFKVSRLLLHPYHEEDSHDYDVALLQLDHPVVRSANVRPVCLPARSHFFEPGLHCWITGWGALREGGPTSNVLQKVDVQLVVQDLCSEAYHYQVTPRMLCAGYRKGKKDACQGDSGGPLVCKEPSGRWFLAGLVSWGLGCGRPNYFGVYTRITGVIGWIQQVLT