Sequence details NCBI ID: XM_004845669.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol C1qtnf6
Gene Name C1q and tumor necrosis factor related protein 6
Entrez Gene ID 101726000

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

C1QTNF6 ENSCPOG00000024664 (Guinea pig)

Gene Details

C1q and tumor necrosis factor related protein 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020500, Guinea pig)

Protein Percentage 88.0%
CDS Percentage 88.67%
Ka/Ks Ratio 0.08468 (Ka = 0.0566, Ks = 0.668)

C1QTNF6 ENSG00000133466 (Human)

Gene Details

C1q and tumor necrosis factor related protein 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000338812, Human)

Protein Percentage 68.73%
CDS Percentage 79.79%
Ka/Ks Ratio 0.21485 (Ka = 0.1736, Ks = 0.808)

C1qtnf6 ENSMUSG00000022440 (Mouse)

Gene Details

C1q and tumor necrosis factor related protein 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023075, Mouse)

Protein Percentage 74.62%
CDS Percentage 77.95%
Ka/Ks Ratio 0.12206 (Ka = 0.1464, Ks = 1.1993)

C1qtnf6 ENSRNOG00000007300 (Rat)

Gene Details

C1q and tumor necrosis factor related protein 6 (C1qtnf6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009551, Rat)

Protein Percentage 74.9%
CDS Percentage 78.38%
Ka/Ks Ratio 0.08241 (Ka = 0.1352, Ks = 1.6409)

Genome Location

Sequence Coding sequence

Length: 795 bp    Location: 10633346..10640988   Strand: +
Raw sequence   
>XM_004845669.1
ATGGGGATGACCACCCCGCGCCCTCTCTGGGCCATGCTCTTGCTCCCTCTTGTGGTGTCTGGGGTCTCCACTGAGGAGCCCACCTCTGGGGAAGCTGTGGCCCCCAGCCTCCCAGGCGGCTGCCTACGGTGCTGTGACTCCGGGGATGCGCTGGCCCCCACCGATGCTGCAGATGCTGCCTCTGTGTCCGCCCTCCCCTACGCCCTGCCCGAGGTCAGGCCCTACATCAACATCACCATCCTGAAGGGTGAGAAAGGGGACCGAGGTCCGCTGGGCACACCAGGGAAGCTGGGCAAAGAGGGCCCCCGTGGGGACCGAGGCCCTCAGGGCATCAAGGGTACCAAGGGGCAGGCGGGCAGCCCGGGCAGCCCATGCCACACACGCTCCTCGGCCTTCTCGGTGGGCCGAAAGACCGCCCTGCACAGCAGTGAGGACTTCCAGCCGCTGCTCTTCGACACTGTTTTTGTGAACCCCGACGGGCACTTCGACATGGCTGCCGGCCACTTTGTCACACCCCTGCGTGGCCTCTACTTCTTCAGCCTCAACGTGCACAGCTGGAACTTCAAGGAGACGTACATGCACGTGGTGCACAACGAGGAGGCGGCCGTCATCCTGTATGCGCAGCCCAGCGACCGCAGCATCATGCAGAGCCAGAGCATGATGCTGGCCCTGGCACCCGGTGACCGAGTCTGGGTGCGGCTTTTCAAGCGTGAGCGCGAGAACGCTGTGTACAGTGACGACGTGGACACCTACATCACCTTCAGCGGCCACCTCATCAAGCCTGAGGATGACTGA

Related Sequences

XP_004845726.1 Protein

C1qtnf6 PREDICTED: complement C1q tumor necrosis factor-related protein 6 [Heterocephalus glaber]

Length: 264 aa      View alignments
>XP_004845726.1
MGMTTPRPLWAMLLLPLVVSGVSTEEPTSGEAVAPSLPGGCLRCCDSGDALAPTDAADAASVSALPYALPEVRPYINITILKGEKGDRGPLGTPGKLGKEGPRGDRGPQGIKGTKGQAGSPGSPCHTRSSAFSVGRKTALHSSEDFQPLLFDTVFVNPDGHFDMAAGHFVTPLRGLYFFSLNVHSWNFKETYMHVVHNEEAAVILYAQPSDRSIMQSQSMMLALAPGDRVWVRLFKRERENAVYSDDVDTYITFSGHLIKPEDD