Sequence details NCBI ID: XM_004845634.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Micall1
Gene Name MICAL-like 1, transcript variant X2
Entrez Gene ID 101714717

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MICALL1 ENSCPOG00000001123 (Guinea pig)

Gene Details

MICAL-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001015, Guinea pig)

Protein Percentage 90.84%
CDS Percentage 90.52%
Ka/Ks Ratio 0.13992 (Ka = 0.0456, Ks = 0.3257)

MICALL1 ENSG00000100139 (Human)

Gene Details

MICAL-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000215957, Human)

Protein Percentage 83.55%
CDS Percentage 85.33%
Ka/Ks Ratio 0.17186 (Ka = 0.0879, Ks = 0.5114)

Micall1 ENSMUSG00000033039 (Mouse)

Gene Details

microtubule associated monooxygenase, calponin and LIM domain containing -like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000042053, Mouse)

Protein Percentage 79.22%
CDS Percentage 80.36%
Ka/Ks Ratio 0.14712 (Ka = 0.1211, Ks = 0.8229)

Micall1 ENSRNOG00000026212 (Rat)

Gene Details

Protein Micall1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034618, Rat)

Protein Percentage 79.26%
CDS Percentage 80.37%
Ka/Ks Ratio 0.15101 (Ka = 0.1219, Ks = 0.8075)

Genome Location

Sequence Coding sequence

Length: 2544 bp    Location: 10020754..9998430   Strand: -
Raw sequence   
>XM_004845634.1
ATGGCCGGGCCGCGGGGCGCGCTGCTGGCCTGGTGCCGCCGCCAGTGCGAGGGCTACGGCGGCGTGGAGATCCGCGACCTGAGCAGCTCCTTCCGGGACGGCCTGGCCTTCTGCGCCATCCTGCACCGGCACCGGCCCGACCTGCTAGATTTTGATTCCCTTTCCAAGGACAATGTCTTTGAGAATAACCGTCTGGCCTTTGAAGTGGCTGAAAAGGAGCTGGGGATCCCTGCCCTCCTGGACCCCAATGACATGGTCTCCATGAGTGTCCCCGACTGCCTCAGCATCATGACCTATGTGTCCCAGTACTACCACCACTTCACCAGCCCCAGCCAAGCCAGTGTATCACCACCCCGGAAGGACCTGGCTGCCTCGTCTCCACCATCAGAGGCGCCCATCCCAGCTGAACCAGGAGACGAGACTCAGAATGAGGAGCTGTCCTCGGGCAGCCTGTCGGAGCGGGGCGCCCAGCGGGCCCCCAGCAGCACGTGTGCGGCCTGCCAGAAACATGTGCACTTGGTGCAGCGCTACCTGGCCGAGGGGAAGCTATACCACCGCCACTGCTTCCGGTGTCGGCAGTGCTCCAGCACCCTGCTCCCGGGTGCCTACAGGAGCGGGCCAGAGGAAGGAACCTTTGTGTGTGTGGAACGCTGTACCAGGCTGGGCCTAGGGGGACAGGCGGGAGCCAGGCCTGGGCCTCCCTCACAGCCAAAGCCTCAGCAACTAACAGAAGAAGCCAGGGATGGCGAGGGAGGTGGTCCCAGCCCCAGTGTCGCTGCAGGACCCAAGGCCATCACCGAGGCCCGGCCCCATGTCCCCACCAAGCCCCCGCTTCCTGGAAAACCCCAGGAGCTGGTGAGCCCCCCCTCCGGCCGACCCACGCCTGCCCCCAGGAAGACCTCCGACAGTGTGGCCTCGACGGCCCCCACACCGCGGCCCCGGTCCAGCCTGCAGCAAGACAGCACAGCAGAGCAGGGTGGCAGTGGTGGCCTTGCAAATGGAAGACTCCAGGAGCCCCCTGTCCCCAAGCCCAGAGGGACTCCCAAGCTGTCAGAGAGGATGCCACCCCCCAGGAAGGACCCCCCATGGATAACACTGGTGCAGGCAGAGCCCAAGAAGAAGCCGGCCCCGCTGCCTCCAGGTAGCCCCGGGCCGCCAAGCCGGGCCAGCAGGCAGGTGGAGAATGGTGGCGTAGAGGAGATGCCCCAGTGTGGCCCTGCAGCTGGGGCCAGCCTCGAGGCCAAGCCCTACAACCCCTTTGAGGAGGAGGAGGAGACGGAGGAGCCATCCCCAGCAGTACCCAGCCCGGCCTCTAGTCCTGCCCAGGCACCCCCAGAGTGCACCCCCAAGTCCCTGCACCCCTGGTACGGCATCACACCCACCAGCAGCCCCAAGGCGAAGAAGCGCCCCGCTCCCCGTGCACCCAGCACGACCCCGCTCGCTCTCCATGCCTCCCGCCTCTCACACTCGGAGCCCCCCTCGGCCACGCCATCACCAGCCCTCAGCGTAGAGAGCCTGGCATCTGAGAGCTCCAGCCAGACAGCGGGTGGGGAGCTTCTGGAGCCACCAGCCGTGCCCAAGAGCTCCTCGGAGCCTGCTGTCCATGCCCCTGGCACCCCTGGGAACTCTGCCAGCCTCTCTGCCCACTCCTCCCTGTCCTTGTCTGGGGAGCTGGTACAGCCCAGTGTGGAGCGGACACCTCAGGCCAGAATAAGGGACAGCCCAGGCCCCCCGCCAGCCAAGCCCTACAGCGGCGCCACCCCCACACCTCTCCTGTTGGTTGCTGACAGGAGCCCTGCACCGTCCCCTGGAAGCTCATCCCCACAGCTACAGTCTTCCTGCAAGGAGAATCCTTTTAACCGGAAGCCATCGCCTGCAGCGTCTCCAACTGCAAAGAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCCCCGGGACATGGCTTTCCGCTCATCAAACGCAAGGTCCAGGCAGACCAGTACGTCCCGGAGGAGGACATCTACGGAGAGATGGATGCCATTGAGCGGCAGCTGGATGCCCTGGAACACCGCGGGGTCCTGCTGGAAGAGAAGCTGCGAGGCGGGGCCAGTGAGGGCCACGAGGACGACATGCTGGTGGATTGGTTCAAGCTCATCCACGAGAAGCACCTGCTGGTACGGCGCGAGTCCGAGCTCATTTACATCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGACGTCGAGTATGAGCTCCGGTGCCTTCTCAACAAGCCAGAAAAAGACTGGACAGAAGAGGACAAGAACCGGGAGAAGGTGCTGATGGAGGAGCTCATGACCCTCATTGAGCAGCGCAATGCCATCGTCAACTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGAAGACAAGATGTTAGAAGCCATGATCAAGAGGAAAGAGTTCCAGAAGGAAGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGCTGAAGATGCTGGGAAATAAGCGTGACACCAAGAGCAAGTCCCCTGGGGACAAGAGCTGA

Related Sequences

XP_004845691.1 Protein

Micall1 PREDICTED: MICAL-like protein 1 isoform X2 [Heterocephalus glaber]

Length: 847 aa      View alignments
>XP_004845691.1
MAGPRGALLAWCRRQCEGYGGVEIRDLSSSFRDGLAFCAILHRHRPDLLDFDSLSKDNVFENNRLAFEVAEKELGIPALLDPNDMVSMSVPDCLSIMTYVSQYYHHFTSPSQASVSPPRKDLAASSPPSEAPIPAEPGDETQNEELSSGSLSERGAQRAPSSTCAACQKHVHLVQRYLAEGKLYHRHCFRCRQCSSTLLPGAYRSGPEEGTFVCVERCTRLGLGGQAGARPGPPSQPKPQQLTEEARDGEGGGPSPSVAAGPKAITEARPHVPTKPPLPGKPQELVSPPSGRPTPAPRKTSDSVASTAPTPRPRSSLQQDSTAEQGGSGGLANGRLQEPPVPKPRGTPKLSERMPPPRKDPPWITLVQAEPKKKPAPLPPGSPGPPSRASRQVENGGVEEMPQCGPAAGASLEAKPYNPFEEEEETEEPSPAVPSPASSPAQAPPECTPKSLHPWYGITPTSSPKAKKRPAPRAPSTTPLALHASRLSHSEPPSATPSPALSVESLASESSSQTAGGELLEPPAVPKSSSEPAVHAPGTPGNSASLSAHSSLSLSGELVQPSVERTPQARIRDSPGPPPAKPYSGATPTPLLLVADRSPAPSPGSSSPQLQSSCKENPFNRKPSPAASPTAKKATKGSKPVRPPAPGHGFPLIKRKVQADQYVPEEDIYGEMDAIERQLDALEHRGVLLEEKLRGGASEGHEDDMLVDWFKLIHEKHLLVRRESELIYIFKQQNLEQRQADVEYELRCLLNKPEKDWTEEDKNREKVLMEELMTLIEQRNAIVNCLDEDRQREEEEDKMLEAMIKRKEFQKEAEPEGKKKGKFKTMKMLKMLGNKRDTKSKSPGDKS