Sequence details NCBI ID: XM_004845558.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tnrc6b
Gene Name trinucleotide repeat containing 6B
Entrez Gene ID 101720757

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TNRC6B ENSCPOG00000005705 (Guinea pig)

Gene Details

trinucleotide repeat containing 6B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005145, Guinea pig)

Protein Percentage 97.07%
CDS Percentage 96.59%
Ka/Ks Ratio 0.21216 (Ka = 0.0172, Ks = 0.0812)

TNRC6B ENSG00000100354 (Human)

Gene Details

trinucleotide repeat containing 6B

External Links

Gene Match (Ensembl Protein ID: ENSP00000401946, Human)

Protein Percentage 97.74%
CDS Percentage 95.97%
Ka/Ks Ratio 0.08601 (Ka = 0.0109, Ks = 0.1267)

Tnrc6b ENSMUSG00000047888 (Mouse)

Gene Details

trinucleotide repeat containing 6b

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064336, Mouse)

Protein Percentage 95.96%
CDS Percentage 94.93%
Ka/Ks Ratio 0.14241 (Ka = 0.0204, Ks = 0.1431)

Tnrc6b ENSRNOG00000024907 (Rat)

Gene Details

trinucleotide repeat containing 6B (Tnrc6b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036077, Rat)

Protein Percentage 95.64%
CDS Percentage 94.65%
Ka/Ks Ratio 0.14803 (Ka = 0.0221, Ks = 0.1494)

Genome Location

Sequence Coding sequence

Length: 5448 bp    Location: 8393968..8136949   Strand: -
Raw sequence   
>XM_004845558.1
ATGCAAACTAATGAGGGAGAAGTATCGGAGGAAAGCAGTTCCAAGGTGGAACTGGAGGATTTTGTAATGGAAGGGCATGGCAAGACTCCACCTCCTGGTGAAGAAAGCAAACAAGAGAAGGAGCAAGAAAGGGAAGAACAGTTAATGGAAGACAAGAAAAGGAAGAAAGAGGATAAAAAGAAAAAAGAAGCCACTCAGAAGGTCACGGAACAAAAAACCAAAGTGCCCGAAGTGACGAAACCAAGTTTAAGCCAACCAACGGCCGCCAGCCCAATTGGCAGCTCTCCATCGCCACCAGTCAATGGTGGCAACAATGCCAAAAGGGTGGCAGTGCCGAACGGACAACCGCCAAGCGCCGCCCGCTACATGCCTCGGGAGGTGCCTCCGCGATTCCGTTGCCAGCAGGACCACAAAGTGTTACTAAAACGTGGACAGCCCCCTCCACCGTCCTGCATGCTCCTTGGGGGCGGGGCAGGGCCTCCTCCCTGCACAGCACCTGGAGCAAACCCAAACAACGCACAAGTGTCAGGAACGCTGCTGCAGAGTGAGAGTGGGACTGCACCAGAGTCAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAATTCCACTTGGGGCACGGGAGCCTCCTCCAACAACGGCACCTCCCCCAACCCAATTCACATCTGGGACAAGGTGATTGTAGACGGGTCTAACATGGAAGAGTGGCCTTGTATTGCCAGCAAAGACACTGAATCTTCTTCCGAAAACACCACCGATAACAACAGTGCCTCGAATCCTGGCTCTGAGAAGAGCACTCTGCCAGGAAGCACCACTAGTAACAAAGGCAAAGGGAGCCAGTGCCAGTCTGCAAGTTCTGGGAACGAATGTAATCTTGGGGTCTGGAAATCTGACCCTAAGGCTAAATCTGTTCAATCTTCCAACTCTACTACAGAGAGCAACAATGGACTTGGTAATTGGAGGAATGTGAGTGGTCAGGATAGAATTGGACCTGGCTCTGGCTTCAGCAACTTTAACCCAAATAGCAACCCATCTGCCTGGCCAGCACTGGTCCAAGAAGGAACTTCTAGGAAAGGGGCATTGGAAACGGATAATAGTAATTCCAGTCCACAGGTTAGCACAGTAGGTCAGGCATCCAGGGAACAGCAGTCAAAGATGGAAAATGCGGGTGTTAATTTTGTTGTCTCTGGCAGAGAACAGGCTCAGATTCATAACACTGATGGACCAAAAAATGGAAACACTAACTCCTTGAACTTAAGTTCACCAAACCCCATGGAGAATAAGGGAATGCCCTTTGGAATGGGCTTGGGGAACACCTCCAGGAGCACTGATGCCCCTTCACAAAGCACTGGAGATCGAAAGACTGGGAGTGTTGGATCTTGGGGTGCAGCTAGGGGGCCTTCTGGAACTGACACAGTCTCTGGACAAAGCAATTCTGGAAATAATGGGAACAATGGAAAAGATAGAGAGGACTCCTGGAAAGGAGCTTCTGTTCAGAAATCAACTGGGTCAAAAAATGATTCTTGGGACAACAAAAACAGGTCTACGGGTGGGTCCTGGAACTTTGGCCCTCAGGACTCTAATGACAACAAATGGGGTGAAGGGAACAAAATGGCATCTGGGGTCTCTCAGGGAGAATGGAAACAGCCTACTGGGTCTGATGAGTTGAAAATTGAAGAATGGAGTGGTCCAAACCAACCAAATTCTAGCACTGGAGCATGGGACAATCAAAAGGGCCACCCCCTCCCTGAAAACCAAGGCAATGCCCAGGCTCCCTGTTGGGGAAGATCTTCCAGCTCCACAGGAAGTGAAGCTGGAGGTCAGAGCACTGGAAGCAACCATAAAGCAGGAAGTAGTGACAGTCATAATTCTGGCCGTCGGTCATACAGGCCCACACATCCTGATTGCCAGGCTGTCTTGCAGACTCTTTTGAGCCGAACTGATTTGGACCCTAGGGTGCTCTCAAACACTGGCTGGGGCCAAACTCAAATTAAGCAGGACACAGTGTGGGATATCGAAGAGGTGCCAAGGCCTGAGGGGAAATCTGACAAAGGAACTGAGGGGTGGGAGAGCGCTGCCACACAGACCAAGAACTCAGGGGGCTGGGGAGATGCACCCAGCCAAAGCAATCAAATGAAGTCTGGATGGGGGGAGCTCTCAGCCTCGACAGAGTGGAAAGACCCCAAGAATACAGGAGGCTGGAATGACTATAAGAACAACAATTCTTCCAACTGGGGAGGAGGACGACCAGATGAAAAGACACCTTCCTCTTGGAATGAGAATCCCAGCAAGGATCAGGGGTGGGGAGGTGGACGACAACCCAATCAAGGATGGACTTCTGGGAAGAATGGTTGGGGAGAGGAAGTTGATCAAGCAAAGAACAGCAATTGGGAAAGTTCTGCAAGTAAACCTGTGGCTGGGTGGGGTGAAGGAGGGCAGAATGAAATTGGAACTTGGGGTAATGGAGGGAATGCAAGCCTAGCTTCAAAAGGTGGGTGGGAAGATTGCAAAAGATCCCCTGCATGGAATGAGACAGGCAGGCAGCCCAATTCCTGGAATAAACAACACCAACAGCAGCAGCCACAGCAGCCACCAACACCACAACCAGAGGCTTCCAGTTCATGGGGAGGCCCACCCCCACCACCTCCAGGCAATGTTCGACCTTCCAATTCCAACTGGAGCAGCGGGCCCCAGCCCGCAACCCCTAAGGATGAGGAACCCAGCGGTTGGGAAGAGCCATCCCCGCAGTCAATCAGTCGGAAAATGGACATTGATGATGGCACTTCAGCATGGGGAGACCCTAACAGTTATAACTACAAGAATGTGAACTTGTGGGATAAGAATTCCCAAGGGGCCCCAGCACCTCGAGAACCAAACCTGCCCACCCCAATGACCGGAAAATCAGCATCGGTCTGGAGCAAAAGCACACCACCTGCTCCAGATAATGGGACTTCAGCTTGGGGTGAGCCGAATGAAAGCAGTCCTGGGTGGGGAGAAATGGATGATGCAGGAGCATCGACCACGGGCTGGGGGAACACACCCGCCAACGCTCCCAATGCCATGAAACCCAATTCTAAATCTATGCAAGACGGCTGGGGGGAGAGTGACGGGCCAGTCACAGGAACTCGCCATCCCAGCTGGGAAGAGGAGGATGATGGAGGAGTCTGGAACACCACCAGCTCTCAGGGAAGTGCTTCCTCCCACAACTCAGCAAGCTGGGGACAAGGAGGAAAGAAACAAATGAAGTGCTCACTAAAAGGAGGAAACAATGATTCATGGATGAATCCTCTTGCCAAACAGTTTTCAAATATGGGATTGTTGAGTCAAAGTGAAGATAATCCAAGCAGCAAAATGGATTTGTCTATAGATAAGAAGTTTGATGTGGACAAGCGAGCAATGAATCTCGGGGATTTTAATGATATCATGAGGAAGGATCGATCTGGGTTCCGTCCACCTAATTCCAAAGACATGGGAACCACAGATGGTGGGCCTTATTTTGAGAAGGGCAGCAATCATGGTTTGTTTGGAAACAGCACAGCACAATCGAGAGGTCTGCACACCCCAGTGCAGCCACTGAGTTCTTCTCCTAGTCTCCGGGCGCAAGTGCCTCCCCAGTTTATCTCCCCCCAGGTTTCTGCCTCAATGCTCAAGCAGTTTCCCAACAGTGGCCTGAATCCAGGTCTTTTCAATGTGGGGCCCCAGTTATCTCCTCAACAAATTGCCATGCTGAGCCAGCTTCCACAGATTCCCCAGTTTCAGTTGGCATGTCAGCTTCTCCTGCAGCAGCAGCAGCAGCAGCAGCTGCTCCAGAACCAGAGAAAGATTTCACAAGCAGTGCGCCAGCAGCAAGAGCAGCAGTTGGCTCGAATGGTGAGTGCTCTCCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACGACAACCTAGCATGAAGCATTCGCCATCTCATCCTGTTGGGCCCAAGCCACACCTGGACAACATGGTACCCAATGCACTGAATGTGGGGCTCCCAGACCTTCAGACCAAAGGGCCAATCCCTGGATATGGTTCTGGCTTCAGTTCTGGCAGCATGGACTACGGCATGGTTGGTGGGAAGGAGGCGGGGACCGAGTCTCGCTTCAAGCAGTGGACCTCCATGATGGAAGGACTGCCTTCTGTGGCCACACAGGACGCCAGCTTGCACAAAAATGGCGCTATAGTGGCCCCTGGTAAGACCCGTGGAGGGTCACCATACAACCAGTTTGATATCATCCCTGGTGACACACTGGGTGGTCATACGGGTCCTGCTGGTGATAGCTGGTTACCTGCCAAATCTCCACCAACAAATAAAATCGGAAGTAAATCCAGCAATGCCAGTTGGCCTCCAGAATTCCAACCAGGAGTGCCATGGAAAGGTATCCAAAACATTGACCCTGAATCTGACCCCTATGTCACCCCAGGAAGTGTGCTGGGGGGTACAGCCACGTCTCCCATTGTAGATACTGACCACCAACTGCTGCGGGATAACACCACAGGGTCTAATTCTTCCCTCAACACCTCGCTGCCTTCACCTGGTGCCTGGCCCTACAGTGCCTCTGATAACTCCTTTACCAACGTTCATAGCACTTCAGCAAAGTTCCCCGATTACAAATCCACGTGGTCCCCAGATCCCATAGGACACAACCCCACTCATCTCTCCAACAAGATGTGGAAAAACCACATCTCCTCCAGGAACACTACACCGCTGCCCCGCCCGCCTCCCGGCCTGACCAACCCCAAACCGGCGTCTCCCTGGAGCAGCACAGCACCCCGTTCAGTCAGGGGCTGGGGAACACAAGACTCTCGGCTTGCCTCTGCCTCTACCTGGAGTGATGGTGGCTCAGTTCGTCCTAGTTACTGGCTGGTTCTTCACAATCTCACTCCACAGATTGATGGGTCAACCTTGAGAACAATCTGCATGCAGCATGGTCCACTGCTGACATTCCATCTGAATCTAACCCAGGGCACGGCCCTGATCCGATACAGCACCAAACAGGAGGCAGCCAAGGCCCAGACTGCACTGCACATGTGTGTGTTGGGAAACACTACCATCCTGGCTGAGTTTGCCACTGATGATGAAGTTAGCCGCTTTCTGGCACAAGCTCAGCCCCCTACACCTGCAGCAACCCCGAGCGCACCGGCTGCAGGGTGGCAGTCGTTGGAGACCGGCCAGAACCAGTCGGACCCCGTCGGACCTGCGCTGAACCTTTTCGGTGGGTCCACTGGGCTCGGGCAATGGAGCAGCAGTGCTGGTGGCAGCAGTGGGGCCGATCTTGCTGGCGCTTCGTTGTGGGGGCCCCCAAACTATTCTTCTAGCTTGTGGGGAGTCCCGACTGTGGAAGATCCCCATAGGATGGGTAGCCCTGCTCCTTTACTACCTGGTGACCTTCTGGGAGGAGGGTCGGATTCAATCTGA

Related Sequences

XP_004845615.1 Protein

Tnrc6b PREDICTED: trinucleotide repeat-containing gene 6B protein [Heterocephalus glaber]

Length: 1815 aa      View alignments
>XP_004845615.1
MQTNEGEVSEESSSKVELEDFVMEGHGKTPPPGEESKQEKEQEREEQLMEDKKRKKEDKKKKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPCTAPGANPNNAQVSGTLLQSESGTAPESTLGGAAASNYANSTWGTGASSNNGTSPNPIHIWDKVIVDGSNMEEWPCIASKDTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECNLGVWKSDPKAKSVQSSNSTTESNNGLGNWRNVSGQDRIGPGSGFSNFNPNSNPSAWPALVQEGTSRKGALETDNSNSSPQVSTVGQASREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLNLSSPNPMENKGMPFGMGLGNTSRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTVSGQSNSGNNGNNGKDREDSWKGASVQKSTGSKNDSWDNKNRSTGGSWNFGPQDSNDNKWGEGNKMASGVSQGEWKQPTGSDELKIEEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSSSTGSEAGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWGQTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQMKSGWGELSASTEWKDPKNTGGWNDYKNNNSSNWGGGRPDEKTPSSWNENPSKDQGWGGGRQPNQGWTSGKNGWGEEVDQAKNSNWESSASKPVAGWGEGGQNEIGTWGNGGNASLASKGGWEDCKRSPAWNETGRQPNSWNKQHQQQQPQQPPTPQPEASSSWGGPPPPPPGNVRPSNSNWSSGPQPATPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGAPAPREPNLPTPMTGKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDAGASTTGWGNTPANAPNAMKPNSKSMQDGWGESDGPVTGTRHPSWEEEDDGGVWNTTSSQGSASSHNSASWGQGGKKQMKCSLKGGNNDSWMNPLAKQFSNMGLLSQSEDNPSSKMDLSIDKKFDVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDGGPYFEKGSNHGLFGNSTAQSRGLHTPVQPLSSSPSLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGSMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQDASLHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRLASASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQNQSDPVGPALNLFGGSTGLGQWSSSAGGSSGADLAGASLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDSI