Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101715434

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MCHR1 ENSCPOG00000012166 (Guinea pig)

Gene Details

melanin-concentrating hormone receptor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010939, Guinea pig)

Protein Percentage 95.88%
CDS Percentage 92.7%
Ka/Ks Ratio 0.0492 (Ka = 0.0189, Ks = 0.3849)

MCHR1 ENSG00000128285 (Human)

Gene Details

melanin-concentrating hormone receptor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000249016, Human)

Protein Percentage 89.79%
CDS Percentage 87.57%
Ka/Ks Ratio 0.09885 (Ka = 0.0579, Ks = 0.5858)

Mchr1 ENSMUSG00000050164 (Mouse)

Gene Details

melanin-concentrating hormone receptor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000126191, Mouse)

Protein Percentage 95.18%
CDS Percentage 88.39%
Ka/Ks Ratio 0.02785 (Ka = 0.0227, Ks = 0.8141)

Mchr1 ENSRNOG00000018895 (Rat)

Gene Details

melanin-concentrating hormone receptor 1 (Mchr1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025564, Rat)

Protein Percentage 95.75%
CDS Percentage 88.76%
Ka/Ks Ratio 0.02272 (Ka = 0.0197, Ks = 0.8652)

Genome Location

Sequence Coding sequence

Length: 1269 bp    Location: 7805635..7802374   Strand: -
>XM_004845541.1
ATGTCAGTGGGAGCCGGGAAGGAGGGAGTGNNCGAGAGCACTGGGCTGGGAGGCGGCGGCAGAGGTTGCCAGGCTGCCGAGGAAGACCCCCTCCAGCCTGTGGGGCGTGCTCCAGGACCAAGTGGCCAAGGGCGCTGGTGGCTGCCGCAGCCTGCGTGGGTGGACGGGAGCTCAACTCCGGGGGCGCAGGCGACCCGCTCCAGCTGCATGGACCTGCAAGCCGCGCTGCTGCCCACTGGCCCCAATGCCAGCAACATCTCCGATGGCCCAGACAACCTCACTGCCCCCGGGTCTCGCCCAGGCACAGGAAGTGTCTCCTACATCAACATCATCATGCCTTCGGTGTTCGGCACCATCTGCCTCCTGGGCATTGTGGGGAACTCCACAGTCATCTTCGCGGTCGTGAAGAAGTCCAAGCTGCATTGGTGCAGCAATGTCCCCGACATCTTCATCATCAATCTCTCCGTGGTGGACCTGCTCTTCCTCCTGGGCATGCCCTTCATGATCCATCAGCTCATGGGCAATGGGGTCTGGCACTTTGGGGAGACCATGTGCACCCTCATCACAGCCATGGACGCCAACAGTCAGTTCACCAGCACCTACATCCTCACTGCCATGGCCATTGACCGCTACCTGGCCACTGTCCACCCCATCTCTTCCACCAAGTTCCGGAAGCCTTCAGTGGCTACCCTGGTGATCTGCCTCCTGTGGGCCCTCTCCTTCATCAGCATCACCCCAGTATGGCTCTATGCCAGGCTCATCCCCTTCCCGGGGGGCACCGTGGGCTGCGGCATCCGCCTGCCCAACCCGGACACTGACCTCTATTGGTTCACCCTGTACCAGTTTTTCCTGGCCTTTGCCCTGCCCTTTGTGGTGATCACTGCTGCGTATGTGAGGATTCTGCAGCGGATGACAACTTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAAAGCGGGTGACCCGCACGGCCATTGCCATCTGCTTGGTCTTCTTTGTGTGCTGGGCGCCCTATTACGTGCTGCAACTGACCCAGCTGTCCATCAGCCGCCCGACCCTCACTTTCGTGTACCTATACAATGCGGCCATCAGCTTGGGGTATGCCAACAGCTGCCTCAACCCCTTTGTGTACATTGTGCTCTGCGAGACCTTCCGTAAACGCCTGGTCCTGTCGGTGAAGCCTGCGGCCCAGGGGCAGCTTCGCGCCATCAGCAACGCTCCGACTGCAGATGAGGAGAGGACAGAAAGCAAAGGCACCTGA

Related Sequences

XP_004845598.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: melanin-concentrating hormone receptor 1 [Heterocephalus glaber]

Length: 422 aa      View alignments
>XP_004845598.1
MSVGAGKEGVXESTGLGGGGRGCQAAEEDPLQPVGRAPGPSGQGRWWLPQPAWVDGSSTPGAQATRSSCMDLQAALLPTGPNASNISDGPDNLTAPGSRPGTGSVSYINIIMPSVFGTICLLGIVGNSTVIFAVVKKSKLHWCSNVPDIFIINLSVVDLLFLLGMPFMIHQLMGNGVWHFGETMCTLITAMDANSQFTSTYILTAMAIDRYLATVHPISSTKFRKPSVATLVICLLWALSFISITPVWLYARLIPFPGGTVGCGIRLPNPDTDLYWFTLYQFFLAFALPFVVITAAYVRILQRMTTSVAPASQRSIRLRTKRVTRTAIAICLVFFVCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANSCLNPFVYIVLCETFRKRLVLSVKPAAQGQLRAISNAPTADEERTESKGT