Details from NCBI annotation

Gene Symbol Csdc2
Gene Name cold shock domain containing C2, RNA binding, transcript variant X1
Entrez Gene ID 101704531

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CSDC2 ENSCPOG00000025372 (Guinea pig)

Gene Details

cold shock domain containing C2, RNA binding

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014332, Guinea pig)

Protein Percentage 95.42%
CDS Percentage 91.5%
Ka/Ks Ratio 0.0254 (Ka = 0.0188, Ks = 0.742)

CSDC2 ENSG00000172346 (Human)

Gene Details

cold shock domain containing C2, RNA binding

External Links

Gene Match (Ensembl Protein ID: ENSP00000302485, Human)

Protein Percentage 98.03%
CDS Percentage 88.82%
Ka/Ks Ratio 0.00874 (Ka = 0.0109, Ks = 1.2494)

Csdc2 ENSMUSG00000042109 (Mouse)

Gene Details

cold shock domain containing C2, RNA binding

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044441, Mouse)

Protein Percentage 96.05%
CDS Percentage 88.16%
Ka/Ks Ratio 0.01872 (Ka = 0.0172, Ks = 0.9166)

Csdc2 ENSRNOG00000005332 (Rat)

Gene Details

cold shock domain containing C2, RNA binding (Csdc2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007091, Rat)

Protein Percentage 96.71%
CDS Percentage 87.5%
Ka/Ks Ratio 0.01506 (Ka = 0.0144, Ks = 0.9592)

Genome Location

Sequence Coding sequence

Length: 648 bp    Location: 7053759..7047272   Strand: -
>XM_004845511.1
ATGGCCAAGAGACAGCGTCCTGTGTGGCCCTGCCACTGTGTACCCAGTCACCTGGTGGTGGCCGTGACGGAGCCTGTGGCTGGTGAGGCTGTCGAGCAGGGCCAGGCCGGGCCCTGCCTGCAAGGACACCCAAGCCCTCCACCGGCCCTGGGGCCCCAGAGCCCGCCAGGCTCTCCCACTGGCCCCACCATGACATCGGAGCCCACGTCCCCCCCAGTGGTGCCCCCGCTCCACTCACCCAAGTCGCCTGTCTGGCCCACCTTCCCCTTCCACAGGGAGGGCAGCAGGGTGTGGGAGCGGGGCGGGACATCTCGGGACCTGCCCAGCCCTTTGCCCACCAAGCGCACCAGGACGTACTCAGCGACAGCCCGCGCCTCGGCCGGCCCTGTGTTCAAGGGCGTCTGCAAGCAGTTCTCCCGCTCCCAGGGCCACGGCTTCATCACCCCCGAGAATGGGTCGGAGGACATCTTTGTGCACGTGTCTGACATTGAGGGAGAGTACGTGCCCGTGGAAGGTGACGAGGTGACCTACAAGATGTGCCCCATCCCGCCTAAGAACCAGAAGTTCCAGGCTGTGGAGGTGGTGCTCACCCAGCTGGCTCCGCACACCCCTCACGAGACGTGGTCTGGGCAGGTTGTGGGCTCCTAG

Related Sequences

XP_004845568.1 Protein

Csdc2 PREDICTED: cold shock domain-containing protein C2 isoform X1 [Heterocephalus glaber]

Length: 215 aa      View alignments
>XP_004845568.1
MAKRQRPVWPCHCVPSHLVVAVTEPVAGEAVEQGQAGPCLQGHPSPPPALGPQSPPGSPTGPTMTSEPTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGTSRDLPSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPIPPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS