Details from NCBI annotation

Gene Symbol Smdt1
Gene Name single-pass membrane protein with aspartate-rich tail 1
Entrez Gene ID 101725774

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMDT1 ENSCPOG00000014524 (Guinea pig)

Gene Details

single-pass membrane protein with aspartate-rich tail 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013087, Guinea pig)

Protein Percentage 89.72%
CDS Percentage 89.72%
Ka/Ks Ratio 0.29946 (Ka = 0.0688, Ks = 0.2296)

SMDT1 ENSG00000183172 (Human)

Gene Details

single-pass membrane protein with aspartate-rich tail 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000327467, Human)

Protein Percentage 89.72%
CDS Percentage 90.97%
Ka/Ks Ratio 0.26511 (Ka = 0.0567, Ks = 0.2138)

Smdt1 ENSMUSG00000022452 (Mouse)

Gene Details

single-pass membrane protein with aspartate rich tail 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023086, Mouse)

Protein Percentage 81.31%
CDS Percentage 84.11%
Ka/Ks Ratio 0.33812 (Ka = 0.1252, Ks = 0.3703)

Smdt1 ENSRNOG00000008461 (Rat)

Gene Details

Protein RGD1311310; Putative uncharacterized protein RGD1311310_predicted

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011316, Rat)

Protein Percentage 79.44%
CDS Percentage 84.74%
Ka/Ks Ratio 0.46697 (Ka = 0.1364, Ks = 0.2921)

Genome Location

Sequence Coding sequence

Length: 441 bp    Location: 6669389..6665433   Strand: -
>XM_004845481.1
ATGGGGTTCTCGTGTGCTTGCACAACATCGCGAGACTTGGGGTGGCGCCCTAAAGGACGGCGGCGCCAGGGGTGGGCGGCGAGGTGCGCGTTCCCGGGAGAGGGGCGGAGCTGGGAGATGGCGTCCGGAGGGGCTCGCTGGCTGCTTTTGGCACCCCTCCGATTCGGGGCCCTTCGTAGCGGGCCGAGGTTGAGGAAAGGTGGCGATGTCCCCGCCGTACGGGACGGCTCAAGTCGCAGCCTGGTACCGTCGAGGTCAGTCATCGTTACCCGCAGCGGCGCCATTTTGCCCAAACCGGTGAAAATGTCCTTCGGTCTTCTCCGCGTGTTCTCCATTGTGATCCCCTTCCTCTATGTCGGGACACTCATTAGCAAGAATTTTGCTGCTCTACTCGAGGAGCATGACATTTTTGTCCCAGAGGATGATGATGATGATGACTAA

Related Sequences

XP_004845538.1 Protein

Smdt1 PREDICTED: single-pass membrane protein with aspartate-rich tail 1, mitochondrial [Heterocephalus glaber]

Length: 146 aa      View alignments
>XP_004845538.1
MGFSCACTTSRDLGWRPKGRRRQGWAARCAFPGEGRSWEMASGGARWLLLAPLRFGALRSGPRLRKGGDVPAVRDGSSRSLVPSRSVIVTRSGAILPKPVKMSFGLLRVFSIVIPFLYVGTLISKNFAALLEEHDIFVPEDDDDDD