Details from NCBI annotation

Gene Symbol Scube1
Gene Name signal peptide, CUB domain, EGF-like 1, transcript variant X1
Entrez Gene ID 101711390

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCUBE1 ENSCPOG00000026406 (Guinea pig)

Gene Details

signal peptide, CUB domain, EGF-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020809, Guinea pig)

Protein Percentage 94.5%
CDS Percentage 92.24%
Ka/Ks Ratio 0.05238 (Ka = 0.0242, Ks = 0.4614)

SCUBE1 ENSG00000159307 (Human)

Gene Details

signal peptide, CUB domain, EGF-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000354080, Human)

Protein Percentage 92.91%
CDS Percentage 89.44%
Ka/Ks Ratio 0.0434 (Ka = 0.0315, Ks = 0.725)

Scube1 ENSMUSG00000016763 (Mouse)

Gene Details

signal peptide, CUB domain, EGF-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130131, Mouse)

Protein Percentage 90.59%
CDS Percentage 86.81%
Ka/Ks Ratio 0.05215 (Ka = 0.0439, Ks = 0.8425)

Scube1 ENSRNOG00000010617 (Rat)

Gene Details

signal peptide, CUB domain, EGF-like 1 (Scube1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017727, Rat)

Protein Percentage 90.77%
CDS Percentage 87.52%
Ka/Ks Ratio 0.05602 (Ka = 0.0426, Ks = 0.7602)

Genome Location

Sequence Coding sequence

Length: 3057 bp    Location: 5673408..5780634   Strand: +
>XM_004845433.1
ATGGGCGCGGCTGCCGTGCGCTGGCATTTGTGCGTGCTGCTCGCCCTGGGCGCGCGCGGGCGGCTGGCGGGAGGCAGCGGGCTCCCAGGAGCAGTCGACGTGGATGAGTGCTCTGAGGGCACAGATGACTGCCACATTGATGCCATCTGCCAGAACACACTCAAGTCCTACAAATGCCTCTGCAAGCCAGGCTACAAAGGAGAAGGGAGGCAGTGTGAAGACATTGATGAGTGTGACAGTGACTCCTACAACGGGGGCTGTGTGCATGAGTGCATCAACATCCCGGGGAACTACAGGTGCACCTGCTTCGACGGCTTCATGCTGGCTCACGATGGACACAACTGCCTGGATGTGGATGAGTGTCAAGACAACAATGGTGGCTGCCAGCAGATCTGTGTCAACGCCATGGGCAGCTACGAGTGTCAGTGCCACAGTGGCTTTTTCCTCAGCGACAACCAGCACACCTGTATCCACCGCTCCAACGAGGGTATGAACTGCATGAACAAAGACCATGGCTGTGCCCACATCTGCCGAGAGACACCCAAAGGTGGGGTGGCCTGCGACTGCAGGCCCGGCTTTGACCTTGCCCAAAACCAGAAGGACTGCACACTAACCTGTAACTATGGAAATGGAGGCTGCCAGCACAGCTGCGAGGACACGGACACAGGCCCCATGTGTGGCTGCCACCAGAAATACGCCCTCCACTCGGACGGCCGGACGTGCATCGAGAAGGATGAGGCTGCAATTGAGCGCTCTCAGTTCAATGCCACGTCAGTAGCTGATGTGGACAAGCGGGTGAAACGGCGGCTCCTCATGGAGACCTGTGCAGTAAATAACGGAGGCTGTGACCGGACGTGCAAGGACACGGCCACTGGCGTGCGATGCAGCTGCCCTGTCGGATTCACGCTGCAGCCGGATGGGAAGACGTGCAAAGACATCAATGAGTGTCTGGTCAACAACGGCGGCTGCGACCACTTCTGCCGCAACACTGTGGGCAGCTTCGAGTGCAGCTGCCGCAAGGGCTACAAGCTGCTGACGGATGAGCGCACGTGCCAAGACATCAACGAGTGCTCCTTCGAGCGGACCTGCGACCACGTCTGCATCAACTCCCCCGGGAGCTTCCAGTGCCTGTGTCACCGCGGCTACACGCTCTACGGGACGACCCACTGCGGAGATGTGGACGAGTGCAGCATAAGCAACGGGCACTGCGACCAGGGCTGCGTCAACACCAAAGGCAGCTACGAATGCGTGTGCCTGCCGGGCAGGCGCCTGCACTGGAACCGGAAAGACTGCGTGGAGCCCGGCAAGTGCCTCTCTCGGGCCCAGGCCACCGCACAGGCCCAGCTGTCCTGCAGCAAGGTGGGCAGTGTGGAAAGCTGCTTCCTTTCCTGCCTGGCCCACACCCTCTTCGTGCCAGACTCGGAAAACAGCTACGTCCTGAGCTGCGGTGTTCCAGGTCTCCAGGGCAGGACTCAACCAAAGCACAATGGCACCAGCTCTGGCACCGGGCCCAGCTGCTCAGATTCCCCCACTTCCCCCATCAAGCAGAAGGCTCGCTTCAAGACCAGAGATGCTAAGTGCCACCTCCGGCCCCGCAGTCGGGAGAGAGCGAAGGAGACCCAGAGGCAGCCATTGCTGGACAACTCTCACATGACTTCCGTGACCCTCAAGTGTGACTCCTCCAAGAAGAGGCGCCGAGGCCGCAAGTCCCCATCCAAGGAGGTGTCCCACATCATAGCAGAGTTTGAGGTGGAGCTGAAGATGGAGGAGGCCTCAGATGCCTGTGACGAGGACTGCCTGCGGAAGCGGGCGGAGCAGAGCTTGCAGGCTGCCATCAAGACCCTGCGGAAGGCTATCAGCCGGCAGCAGTTCTATGTCCAGATCTCAGGCACAGAGTACGAGGTGGCCCAGCGTCCAGCAAAGGCCCTGGAAGGACCAGGGACCTGCGGCACAGGCCAGGTGCTCCAGGACAGCAAATGTGTGGCCTGCGGACCTGGCACCTACTTCAGCGGTGAGCGGGCCCAGTGTGTGCCGTGCATGTCGGGGACCTACCAGGACCTGGAGGGCCAGCTCAGCTGCTCCCCATGCCCCAGCAGTGACGGACTTGGCCTGGCCGGTGCCCGAAACGTGTCTGAATGTGGAGGCCAGTGCTCTCCGGGCTCCTTCTCAGCCGATGGCTTCAAGCCGTGCCAGACCTGTCCCCTGGGCACATACCAGCCCGAGCCCGGCCGCACAGGCTGTTTGCCCTGTGGTGGGGGACTGCTCACCAAGCACGAGGGTGCCACCTCCTTCCAGGACTGCGAGGCCAAAGTGCACTGCTCCCCCGGCCACCACTACAATACCACCACGCACCGCTGCATCCGCTGCCCTGTAGGCACCTACCAGCCTGAGTTTGGCCAGAACCATTGTATCACCTGCCCGGGCAACACCAGCACCGACTTCGATGGCTCCACTAATGTCACCCACTGTAAAAACCAGCACTGTGGTGGTGAGCTTGGTGACTACACAGGCTACATCGAGTCCCCCAACTACCCCGGCGACTACCCAGCCAACGCCGAGTGTGTGTGGCACATCGTACCACCCCCCAAGCGCAGGATCCTCATTGTGGTCCCCGAGATCTTCCTGCCGATCGAGGACGAGTGCGGCGATGTCCTGGTCATGAGGAAGAGCGCCTCCCCCACATCCATCACCACCTACGAGACCTGCCAGACCTACGAGAGACCCATCGCCTTCACCTCTCGTTCCCGGAAGCTCTGGATCCAGTTCAAATCCAATGAGGGCAACAGTGGAAAAGGCTTCCAAGTTCCCTACGTCACCTACGATGAGGACTACCAGCAACTGATCGAAGACATCGTGCGCGACGGGCGCCTGTACGCCTCGGAGAATCACCAGGAAATCTTGAAAGACAAGAAGCTGATCAAGGCGCTGTTCGATGTGCTGGCGCACCCCCAGAACTACTTCAAGTATACAGCCCAGGAGTCCAAGGAGATGTTCCCTCGCTCCTTCATCAAACTACTGCGCTCCAAAGTGTCCCGGTTCCTGCGACCCTACAAGTAA

Related Sequences

XP_004845490.1 Protein

Scube1 PREDICTED: signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 1018 aa      View alignments
>XP_004845490.1
MGAAAVRWHLCVLLALGARGRLAGGSGLPGAVDVDECSEGTDDCHIDAICQNTLKSYKCLCKPGYKGEGRQCEDIDECDSDSYNGGCVHECINIPGNYRCTCFDGFMLAHDGHNCLDVDECQDNNGGCQQICVNAMGSYECQCHSGFFLSDNQHTCIHRSNEGMNCMNKDHGCAHICRETPKGGVACDCRPGFDLAQNQKDCTLTCNYGNGGCQHSCEDTDTGPMCGCHQKYALHSDGRTCIEKDEAAIERSQFNATSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTLQPDGKTCKDINECLVNNGGCDHFCRNTVGSFECSCRKGYKLLTDERTCQDINECSFERTCDHVCINSPGSFQCLCHRGYTLYGTTHCGDVDECSISNGHCDQGCVNTKGSYECVCLPGRRLHWNRKDCVEPGKCLSRAQATAQAQLSCSKVGSVESCFLSCLAHTLFVPDSENSYVLSCGVPGLQGRTQPKHNGTSSGTGPSCSDSPTSPIKQKARFKTRDAKCHLRPRSRERAKETQRQPLLDNSHMTSVTLKCDSSKKRRRGRKSPSKEVSHIIAEFEVELKMEEASDACDEDCLRKRAEQSLQAAIKTLRKAISRQQFYVQISGTEYEVAQRPAKALEGPGTCGTGQVLQDSKCVACGPGTYFSGERAQCVPCMSGTYQDLEGQLSCSPCPSSDGLGLAGARNVSECGGQCSPGSFSADGFKPCQTCPLGTYQPEPGRTGCLPCGGGLLTKHEGATSFQDCEAKVHCSPGHHYNTTTHRCIRCPVGTYQPEFGQNHCITCPGNTSTDFDGSTNVTHCKNQHCGGELGDYTGYIESPNYPGDYPANAECVWHIVPPPKRRILIVVPEIFLPIEDECGDVLVMRKSASPTSITTYETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVPYVTYDEDYQQLIEDIVRDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFKYTAQESKEMFPRSFIKLLRSKVSRFLRPYK