Details from NCBI annotation

Gene Symbol Phf21b
Gene Name PHD finger protein 21B, transcript variant X2
Entrez Gene ID 101703002

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PHF21B ENSCPOG00000021984 (Guinea pig)

Gene Details

PHD finger protein 21B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017051, Guinea pig)

Protein Percentage 87.17%
CDS Percentage 87.54%
Ka/Ks Ratio 0.1834 (Ka = 0.0804, Ks = 0.4387)

PHF21B ENSG00000056487 (Human)

Gene Details

PHD finger protein 21B

External Links

Gene Match (Ensembl Protein ID: ENSP00000324403, Human)

Protein Percentage 88.72%
CDS Percentage 89.79%
Ka/Ks Ratio 0.13316 (Ka = 0.0534, Ks = 0.4007)

Phf21b ENSMUSG00000016624 (Mouse)

Gene Details

PHD finger protein 21B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000125355, Mouse)

Protein Percentage 88.87%
CDS Percentage 86.87%
Ka/Ks Ratio 0.1164 (Ka = 0.0628, Ks = 0.5398)

Phf21b ENSRNOG00000013067 (Rat)

Gene Details

PHD finger protein 21B (Phf21b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017906, Rat)

Protein Percentage 88.22%
CDS Percentage 86.51%
Ka/Ks Ratio 0.11753 (Ka = 0.066, Ks = 0.5612)

Genome Location

Sequence Coding sequence

Length: 1413 bp    Location: 4545055..4605501   Strand: +
>XM_004845414.1
ATGAGGCGGCAGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCAGCGCTCAGCGATAAACAAGCTTTGGGAAGCATCACTTCAGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCAGAGGTTGGCTGGGCAAGGAGCGGCCGTGCTACCTCAGGTTAGGCCAAAGACTCTGATCCCAGACAGCCTCCCCGTTGCCCCAGGCAGGGACCGGCCACCCAAGCAGCCCCCGACGTTCCAGAAGGGCACTGTGGTCAGCATCAAGAACCCTAGCCCAGCCCTTCCCACCGCCAACAACACTGTCAACCATGTGCCGACACCCGGCAGCCAGCCCCAGGCCCTTGCTGAGCCCGCCGCCATCACCTCGCCCCTGAGCAGCGCGGGGGTGGCCTACGCCATCATCTCCGCCTCCCCCAGCAATGCCGCCGTGCCCGTGGTCAGTGACAGCATCAAAGTGCAGCCCCTCCTCATCAGTGCGGACAGCAAGGTCATCATTATCCAGCCTCAAGTCCAGACACAGCCCGAGAGCTCAGCGGAGCCCCGGCCGTCCACAGAGGAGCCATCTCAGGGAGCTCAGGCCACCAAAAAGAAGAAGGAAGACCGAGCTCTGAGCCAGGAGAACCCCGAGAAAATCGCCTTCATGGTAGCGCTCGGCCTGGTCACCACGGAGCACCTGGAAGAAATCCAGAGCAAGCGCCAGGAGCGGAAGAGGAGAAGCACCGCCAACCCCGCCTATAGTGGCCTCCTGGAGACCGAGAGGAAGCGGCTGGCCTCCAGCTATCTCAACAACCCCCTGTTCCTCACAGCCCGAGCCAATGAGGACCCCTGCTGGAAGAGTGAGCTCGAGCACGATGAGCTTTGTGCAGCCTGCAGGCGGGGCTCCAACCTGCTGTGCTGCAGCGCCTGCCCAGGGTCCTACCACCTTGGCTGCCTGCACCCACCCCTCAAGACGGCACCCAAGGGCGGGTGGCTGTGCCCCAAATGCCAGCAGAAGGCCTTAAAGAAAGACGAGGGTGTGCCCTGGACCGGCATGCTGGCCATTGTGCACTCCTATGTCACACACAAGACCGTCAAAGAAGAGGAAAAGCAGAAGCTGCTGCAGCGGGGCAGTGAGCTGCAGAGTGAGCACCAGCATCTGGAAGAGCGAGACCGGCAACTGGCCTCTGCTGTGAAGAAATGCCTGGAGCTTAAGACCAGCCTGCTGGCCCGGCAGAGGGGCACCCAGTCTTCACTGGACCGCCTCCGGGCCCTCCTGAGACTGATACAGGGCGAGCAGATGCTCCAGGTCGCCATGTCGACCACAAGCCCCACCCCACTGCTGGCCGGGCCCTGGACCAAGCCCTCAGCTGCTGCCATGCGCTCCACCCTCCAGCACCCCCAGGACCACAAGTGA

Related Sequences

XP_004845471.1 Protein

Phf21b PREDICTED: PHD finger protein 21B isoform X2 [Heterocephalus glaber]

Length: 470 aa      View alignments
>XP_004845471.1
MRRQPQNGDLKKQLHERQPRIAALSDKQALGSITSVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKGTVVSIKNPSPALPTANNTVNHVPTPGSQPQALAEPAAITSPLSSAGVAYAIISASPSNAAVPVVSDSIKVQPLLISADSKVIIIQPQVQTQPESSAEPRPSTEEPSQGAQATKKKKEDRALSQENPEKIAFMVALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASSYLNNPLFLTARANEDPCWKSELEHDELCAACRRGSNLLCCSACPGSYHLGCLHPPLKTAPKGGWLCPKCQQKALKKDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQSEHQHLEERDRQLASAVKKCLELKTSLLARQRGTQSSLDRLRALLRLIQGEQMLQVAMSTTSPTPLLAGPWTKPSAAAMRSTLQHPQDHK