Details from NCBI annotation

Gene Symbol Upk3a
Gene Name uroplakin 3A, transcript variant X1
Entrez Gene ID 101700751

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UPK3A ENSCPOG00000025483 (Guinea pig)

Gene Details

uroplakin 3A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014301, Guinea pig)

Protein Percentage 83.62%
CDS Percentage 87.57%
Ka/Ks Ratio 0.15124 (Ka = 0.0797, Ks = 0.5268)

UPK3A ENSG00000100373 (Human)

Gene Details

uroplakin 3A

External Links

Gene Match (Ensembl Protein ID: ENSP00000216211, Human)

Protein Percentage 81.88%
CDS Percentage 82.46%
Ka/Ks Ratio 0.09196 (Ka = 0.0899, Ks = 0.9779)

Upk3a ENSMUSG00000022435 (Mouse)

Gene Details

uroplakin 3A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023070, Mouse)

Protein Percentage 82.93%
CDS Percentage 82.46%
Ka/Ks Ratio 0.10345 (Ka = 0.0926, Ks = 0.8954)

Upk3a ENSRNOG00000013593 (Rat)

Gene Details

uroplakin 3A (Upk3a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018365, Rat)

Protein Percentage 80.84%
CDS Percentage 81.42%
Ka/Ks Ratio 0.1052 (Ka = 0.1004, Ks = 0.9548)

Genome Location

Sequence Coding sequence

Length: 864 bp    Location: 4361235..4354415   Strand: -
>XM_004845406.1
ATGCCTCCGCTCTGGACACTGCTGGCGCTTGGCTGCCTGCGGAGTGGCTCGACTGTTGACCTCCAGCCCCAGCTGGCCAGCATAACCTTTGCCACCAACAACCCCACGCTCACCACCGTGGCCCTGGAAAAGCCCCTCTGCATGTTTGACAGCACAGAGCCACTCACCGGTACCTACAAGGTCTACCTCTACGTCATGGTAGACTCGGCCAGCTCCAGGAATACTTCCGTGCAGGACAGCAACAAGAGCCCCCTGAGATCCACATTCTGGCAAACCATGGGCGGGAGGACGAGGCCCTACAGAGCTGCCGCCTTTGACCTGACCCCTTGTGGTGACTTGCCCAGCCTGGACACCGTCGGGGATGTGAACCAGGCTGCAGAGATCCTGGATGTGTACCTGGTCAGGGTGGGGGACAATGGGACCTGCCTGAGGGATCCCAACTTCCGGGGCCTCTGCAACCCCCCGCTGTCAGCTGCCACAGCATACAGGTTCAAGTATGTCCTGGTCAACATGTCCACGGGCCTGGTGCAGGACGAGAGCCTGTGGTCGGGCCCCATCCACACTAACCAGCCCACCCCCTATACGGCCATCGACACGTGGCCCGGCAGGCGCAGCGGGGGCATGATTGTCATCACCTCCATCCTGGGCTCTCTGCCCTTCTTCTTGCTAGTGGGCTTCGCTAGCGCCATCGTCCTCAGCTTCGTGGACATGGGCAGCTCTGATGGGGAGATGACCCACGACTCCCAGATCACACAGGAAGCTGTCCCCAAGTCCCTGGGGACCTCGGAGTCGTCCTACACGTCTGTGAACCTTGGGCCACCCCTGAACCGGGCGGAAGTGTTCTCCAGCAAGCTGCAGGACTGA

Related Sequences

XP_004845463.1 Protein

Upk3a PREDICTED: uroplakin-3a isoform X1 [Heterocephalus glaber]

Length: 287 aa      View alignments
>XP_004845463.1
MPPLWTLLALGCLRSGSTVDLQPQLASITFATNNPTLTTVALEKPLCMFDSTEPLTGTYKVYLYVMVDSASSRNTSVQDSNKSPLRSTFWQTMGGRTRPYRAAAFDLTPCGDLPSLDTVGDVNQAAEILDVYLVRVGDNGTCLRDPNFRGLCNPPLSAATAYRFKYVLVNMSTGLVQDESLWSGPIHTNQPTPYTAIDTWPGRRSGGMIVITSILGSLPFFLLVGFASAIVLSFVDMGSSDGEMTHDSQITQEAVPKSLGTSESSYTSVNLGPPLNRAEVFSSKLQD