Details from NCBI annotation

Gene Symbol Brd1
Gene Name bromodomain containing 1, transcript variant X1
Entrez Gene ID 101716821

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BRD1 ENSCPOG00000005318 (Guinea pig)

Gene Details

bromodomain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004782, Guinea pig)

Protein Percentage 97.56%
CDS Percentage 93.94%
Ka/Ks Ratio 0.04188 (Ka = 0.0112, Ks = 0.2677)

BRD1 ENSG00000100425 (Human)

Gene Details

bromodomain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000216267, Human)

Protein Percentage 94.05%
CDS Percentage 89.41%
Ka/Ks Ratio 0.04429 (Ka = 0.0264, Ks = 0.5969)

Brd1 ENSMUSG00000022387 (Mouse)

Gene Details

bromodomain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105007, Mouse)

Protein Percentage 94.79%
CDS Percentage 89.49%
Ka/Ks Ratio 0.05012 (Ka = 0.0248, Ks = 0.4947)

Brd1 ENSRNOG00000004538 (Rat)

Gene Details

bromodomain containing 1 (Brd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006034, Rat)

Protein Percentage 95.27%
CDS Percentage 89.35%
Ka/Ks Ratio 0.04271 (Ka = 0.023, Ks = 0.5378)

Genome Location

Sequence Coding sequence

Length: 3573 bp    Location: 811473..853699   Strand: +
>XM_004845366.1
ATGAGGAGGAAAGGACGATGCCATCGAGGCTCTTCAGCAAGGCACGCTTCCTCCCCGTGCAGTGTTAAACACTCCCCTACACGAGAGACCCTGACATACGCGCAAGCTCAAAGGATGGTTGAGATAGAGATCGAAGGGCGCTTGCATCGGATCAGTATTTTTGATCCCCTTGAGATCATATTAGAAGATGACCTCACTGCTCAGGAAATGAGTGAATGCAACAGCAATAAAGAAAACAGTGAGAGGCCACCTGTTTGCTTAAGAACTAAGCGCCACAAAAACAACAGAGTGAAAAAGAAAAGTGAGGCTCTGCCCAGCACTCATGGCACACCTGCCTCAGCCAGCACCCTTCCTGAGCCCAAGGTGCGGATCGTGGAGTACAGCCCACCATCCGCACCCAGGAGGCCCCCTATGTACTACAAGTTCATCGAGAAGTCAGCGGAGGAGCTGGACAACGAGGTGGAGTATGACATGGATGAGGAGGACTATGCCTGGCTGGAGATCATCAACGATAAGCGGAAGGGCGACTGTATCTCTGCGGTGTCACAGAACATGTTTGAGTTCCTGATGGACCGATTTGAGAAGGAGTCGTACTGTGAGAACCAGAAGCAGGGCGAGCAGCAGTCCCTGATTGACGAGGATGCCGTGTGCTGCATCTGCATGGACGGTGAGTGTCAGAACAGCAATGTGATCCTCTTCTGTGACATGTGCAACCTGGCTGTGCACCAGGAGTGCTATGGGGTGCCCTATATCCCTGAGGGCCAGTGGCTTTGCCGCCACTGCCTGCAGTCCCGGGCCCGTCCCGCTGATTGCGTCCTGTGCCCCAACAAGGGCGGTGCCTTCAAAAAGACAGATGATGACCGCTGGGGCCACGTGGTGTGTGCCCTGTGGATCCCAGAGGTCGGCTTCGCCAACACCGTGTTCATTGAGCCCATTGATGGTGTGAGGAACATCCCTCCGGCCCGGTGGAAACTGACATGCTACCTCTGTAAGCAGAAGGGCGTGGGCGCCTGCATCCAGTGCCACAAAGCAAACTGCTACACGGCCTTCCATGTGACGTGTGCCCAGAAGGCAGGTCTGTACATGAAGATGGAGCCTGTGAAGGAACTGACTGGAGGCAGCACCACCTTCTCTGTCAGAAAGACCGCGTACTGTGATGTCCACACACCTCCGGGCTGCACACGAAGGCCTCTGAACATTTATGGGGATGTCGAAATGAGAAATGGTGTCTGTAGAAAAGAGAGCTCAGTCAAAACGGTCAGGTCTACATCCAAGGTCAGGAAGAAAGCGAAAAAGACTAAGAAAACACTGGCTGAGCCCTGCGCGGTCCTTCCTGCCATCTGTGCTCCCTATATTCCCCCTCATAGGTTAAATAGGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGCAGTTTGTGGAACGAGCCCACAGCTACTGGTTACTCAAGAGGCTGTCAAGAAATGGCGCCCCCCTGCTGCGGCGCCTGCAGTCCAGCCTGCAGTCCCAGAGGAGCACGCAGCAGAGAGAAAATGATGAGGAGATGAAAGCAGCCAAAGAGAAGCTGAAGTATTGGCAGCGGCTGCGGCATGACCTGGAGCGAGCCCGCCTGCTCATCGAGCTGCTGCGCAAGCGGGAGAAGCTCAAGCGCGAGCAGGTGAAGGTGGAGCAGATGGCCATGGAGCTGCGGCTGACCCCTCTGACTGTGCTGCTGCGCTCGGTGCTTGAGCAGCTGCAGGACAAGGACCCTGCCAAGATCTTCGCCCAGCCCGTGAGTCTGAAGGAGGTGCCAGATTATCTGGATCACATCAAACATCCCATGGACTTTGCCACAATGAGGAAGCGGCTAGAAGCCCAAGGGTATAGAAACCTCCGTGCGTTTGAGGAGGATTTTAATCTCATTGTAGATAACTGCATGAAGTACAATGCCAAGGACACCGTGTTTTATAGAGCCGCAGTGAGGCTGCGTGATCAGGGCGGTGTTGTTCTGAGGCAGGCCCGGCGCCAGGTGGACAGCGTCGGCCTGGAAGAGGCCTCGGGAATGCACCTGCCTGAGCGGCCTGCCGAGGCCCCTCGGAGGCCTTTCTCCTGGGAAGATGTGGACAGGTTGCTGGACCCAGCCAACAGGGCCCACCTGGGTCTAGAGGAGCAGCTGAGGGAGCTGCTGGACAAGCTGGACCTCACCTGCTCTATGAAGTCCAGTGGCTCGAGGAGCAAGCGGGCAAAGCTGCTCAAAAAGGAGATCGCCCTCCTGCGCACCAAGCTGAGCCAGCAGCACAGCCAGCCCCCCGCAGCGGGGCCTGGCCCCGGAGGCTTGGAGGAGGACAGCACCCTGCGGGGGCCGGATGTGGGTGAGGAAGGAGATAAATCTCCCCCTAAACTTGAACCATCAGATGCATTACCTCTTCCTTCAAACTCGGAGACTAATTCAGAACCACCAACCCTCAAACCAGTAGAACTCAACCCCGAGCAGAGTAAACTATTCAAAAGAGTCACATTTGATAATGCATCACATAGCCCTTGCACTCAGAGCGCACTGGTAAGCGGACACCCTCCAGAGCCCACCCTCGCCAGTAGTGGCGATGTGCCGGCGGCTGCGGCGGCCTCCGCGGTGGCGGAGCCATCAAGCGATGTAAACAGACGCACTTCTGTTCTCTTCTGCAAATCGAAAAGTGTAAGCCCCCCAAAGTCTGCCAAGAACACTGAAACCCAGCCAACTTCTCCTCAGCTAGGGACCAAAACCTTTTTGTCTGTAGTCCTTCCGAGGTTGGAGACTCTACTGCAGCCAAGGAAAAGATCGAGGAGCACATGTGGAGACTCCGAGGTGGAGGAGGAGTCCCCGGGAAAGCGCCTGGACACAGGTCTCACCAATGGCTTTGGGGGCTCGAGGAATGAGCAGGAGCCGGGCAGTGGCCCGGGGAGGAAAGCTGCCCCCCGGCGTCGCTGTGTGTCCGAGTCTAGCATCTCTTCCAACAACAGCCCGCTCTGTGACTCAAGCTTCAGCACTCCCAAGTGTGGGCGTGGCAAGCCTGCCCTTGTGCGGAGGCACACACTGGAGGACCGCAGTGAGCTGATCTCCTGCATCGAGAATGGCAATTATGCCAAGGCAGCCCGGATCGCAGCTGAAGTGGGGCAGAACAGCATGTGGATCTCCACGGACGCCGCTGCCTCCGTGCTGGAGCCCCTGAAGGTGGTGTGGGCCAAGTGCAGTGGCTACCCCTCCTACCCTGCGCTGATCATAGACCCCAAGATGCCCCGAGTGCCGGGCCACCACAATGGCGTCACCATCCCCGCACCACCCCTGGACGTGCTGAAGGTGGGCGAGCACATGCAGACCAAGTCCGAGGAGAGGCTTTTCCTCGTCCTGTTCTTTGACAATAAGAGGAGCTGGCAGTGGCTCCCTAAGTCCAAGATGGCTCCACTGGGCATCGATGAGACCATTGACAAGCTGAAGATGATGGAGGGGAGGAATTCCAGCATCCGAAAGGCTGTCCGCATTGCTTTCGACCGTGCCATGAACCATCTGAGCCGCGTGCATGGGGAGCCAGCCAGCGACCTCAGTGACATAGACTGA

Related Sequences

XP_004845423.1 Protein

Brd1 PREDICTED: bromodomain-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 1190 aa      View alignments
>XP_004845423.1
MRRKGRCHRGSSARHASSPCSVKHSPTRETLTYAQAQRMVEIEIEGRLHRISIFDPLEIILEDDLTAQEMSECNSNKENSERPPVCLRTKRHKNNRVKKKSEALPSTHGTPASASTLPEPKVRIVEYSPPSAPRRPPMYYKFIEKSAEELDNEVEYDMDEEDYAWLEIINDKRKGDCISAVSQNMFEFLMDRFEKESYCENQKQGEQQSLIDEDAVCCICMDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRARPADCVLCPNKGGAFKKTDDDRWGHVVCALWIPEVGFANTVFIEPIDGVRNIPPARWKLTCYLCKQKGVGACIQCHKANCYTAFHVTCAQKAGLYMKMEPVKELTGGSTTFSVRKTAYCDVHTPPGCTRRPLNIYGDVEMRNGVCRKESSVKTVRSTSKVRKKAKKTKKTLAEPCAVLPAICAPYIPPHRLNRIANQVAIQRKKQFVERAHSYWLLKRLSRNGAPLLRRLQSSLQSQRSTQQRENDEEMKAAKEKLKYWQRLRHDLERARLLIELLRKREKLKREQVKVEQMAMELRLTPLTVLLRSVLEQLQDKDPAKIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYRNLRAFEEDFNLIVDNCMKYNAKDTVFYRAAVRLRDQGGVVLRQARRQVDSVGLEEASGMHLPERPAEAPRRPFSWEDVDRLLDPANRAHLGLEEQLRELLDKLDLTCSMKSSGSRSKRAKLLKKEIALLRTKLSQQHSQPPAAGPGPGGLEEDSTLRGPDVGEEGDKSPPKLEPSDALPLPSNSETNSEPPTLKPVELNPEQSKLFKRVTFDNASHSPCTQSALVSGHPPEPTLASSGDVPAAAAASAVAEPSSDVNRRTSVLFCKSKSVSPPKSAKNTETQPTSPQLGTKTFLSVVLPRLETLLQPRKRSRSTCGDSEVEEESPGKRLDTGLTNGFGGSRNEQEPGSGPGRKAAPRRRCVSESSISSNNSPLCDSSFSTPKCGRGKPALVRRHTLEDRSELISCIENGNYAKAARIAAEVGQNSMWISTDAAASVLEPLKVVWAKCSGYPSYPALIIDPKMPRVPGHHNGVTIPAPPLDVLKVGEHMQTKSEERLFLVLFFDNKRSWQWLPKSKMAPLGIDETIDKLKMMEGRNSSIRKAVRIAFDRAMNHLSRVHGEPASDLSDID