Sequence details NCBI ID: XM_004845337.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tubgcp6
Gene Name tubulin, gamma complex associated protein 6
Entrez Gene ID 101708516

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TUBGCP6 ENSG00000128159 (Human)

Gene Details

tubulin, gamma complex associated protein 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000248846, Human)

Protein Percentage 78.16%
CDS Percentage 80.09%
Ka/Ks Ratio 0.16535 (Ka = 0.1292, Ks = 0.7815)

Tubgcp6 ENSMUSG00000051786 (Mouse)

Gene Details

tubulin, gamma complex associated protein 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104977, Mouse)

Protein Percentage 78.55%
CDS Percentage 79.0%
Ka/Ks Ratio 0.16831 (Ka = 0.1333, Ks = 0.7917)

Tubgcp6 ENSRNOG00000006028 (Rat)

Gene Details

tubulin, gamma complex associated protein 6 (Tubgcp6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007954, Rat)

Protein Percentage 79.11%
CDS Percentage 78.8%
Ka/Ks Ratio 0.16618 (Ka = 0.1337, Ks = 0.8044)

Genome Location

Sequence Coding sequence

Length: 5097 bp    Location: 524562..542418   Strand: +
Raw sequence   
>XM_004845337.1
ATGGCCAGCATCACCCAGCTGTTCGACGACTTGTGCGAGGCCCTCCTGCCCGCTGCGCAGCCTCGCCCGGGGCAACGCAGCGTAGACCGCAAGAGGACCAAGCAGAGCCTCAAGAGGGTCGCCTACAATGCGCTCTTCACAAACCTTTTCCAAGAGGACGCTCGCCCGCTGCAGTCCGACTTGTCAAAGCTCCCAGTGAGAAACAAGGTCCTCATGCTGTCCTTCGACCTGAGAGTGGGCGGCCTGGGCCCCGAGGCCGACCGCTTGGAGGAGCTGGTGGAGGGGCTGGAGGCCGCCCCTTGCTGTCCGCTGCTGGAGGTGGGGTCCGTGTTGACCCTCTTGGTTCAGCTAGCAGGGAGTGGCCCGCCTCAAATCCTGCAAAGAAAACGGGACTATTTCTTTAACAACAAGCACGCAGGGAGAAACGTTCCTTACAGTGGTTACGACTGCTGTGATCTGAGCGTGTTTGAAATGGATGTTCAGTCCTTCATCTCCAGAGAGGAGCATTTGTGTCACAGCATGATCCAGGAAACACTTCAGGTGATGGAGGCGGCTCCAGGCACCGCCCTGCCCACTGTTGGTCTCTTCTCATTTGGTGACCCCTGTGGTGACAGGTTTGAGAGAGACACCCGGGTCTCGCTCTTTGGTGCCCTTGTGCACAGCCGCACTTACGACATGGATGTTCGACTGGACTTTCCTCCTGTGCCAGACAGCGCAGACCTCTCTGGACTGGCCATTAAGGTCCCTCAGAGCGTGGATCAGTGGGAAGATGAAGGGTTCCAGTCGGCTTCCAATTTGACTCCTGATTCCCAGTCTGAACCAAGCATGACCCCTGATGTGGACCTGTGGGAAGCTGCGCTCACCTACGAGGTCAGCAAGCGGCGGTGCTGGGAGCGAATTGGATGCCCCCCTGGCCACAGAGAGGAGCCCTATCTCACGGAGGCAGGACGGGACACCTTCGACAGGTTCTGCAGGCTCCGCCAAGAGGAGCTGCAGGTGCTCAGTGGGGGCCCCCTGCAGGCCCCGAGGCCCGTGCTAGTGACAGAGCAGGAGCTGGTGAAGGACTCACTGAATGTTCTGCTTGGGGTGGCATCGGCCACATTCTCCCTCTGCCAGCCAGCTCAGGCCTTCGTGGTGGCCCGAGGTGTCCATGTGTCGGGCGCCTCCCCTGAGAGCATCAGCAGCATCCTGTCAGAGGTGGCAGCGTATGGGACCTGCTACACGCGCCTCAGCCACTTCTCCCTGCAGCCCGCCCTGGGCTCCTCCTGCAGCAGGGGCCTGGTGTTCCAGGCCTTCACCAGCGGCCTGCGAAGGTACCTGCAGTATTACCGAGCTTGTGTCCTCGCCACCCCGCCCACCCTGAGCCTCCTCACCATTGGCTTTCTCTTCAAGAAGCTGGGCCGGCAGCTCCGGTACTTGGCTGAGCTCTGTGGTGTTGGTGCCATGCTCCTGGGAACTGGCGGAGGAGAGCCTAGGGCTGTGTTCCCCACTGGCGTGAGGCTGCTGTCCTACCTCTACCAGGAGGCGTTGGACAACTGCAGCAATGAGCACTACCCCGTGCTGCTGTCCCTACTGAAGACAAGCTGTGAACCCTACACACGGTTCATCCGTGACTGGGTGTACAGCGGGGTCCTCGGAGACGTCTATGGGGAATTTATGATCCAGGGGAACGATGAGTACCTCGGCTGCAGAGACAAGTCTTACTGGACCCATGGCTTCGCGCTTATTTCCAAAGAGGTGGAAGACTGCGTCCCGGTGTTCCTGAGGCACGTGGCACACGATGTGTACATCTGCGGGAAGACCATCAACCTGCTGAAGCTCTGCTGTCCTCAGCACTACCTCTGTTGGTCGGACATCCCTGTCCCTCGCATCTCAGTGATTTTCTCCCTGGAGGAGCTGAAGGAGGTCGAGAAGGACTGCGCAGTGTACGTGGGGCGCATGGAGCGGGTGGCCCGCCACAGCTCCATCAGCAAGGAGGAGAAGGAATTACGTATGGAAATTGCAAAACAAGAATTAATTGCCCATGCTCGGGAGGCGGCTTCCAGGGTCCTTCGTGAACTCAGTGACCGGCAGACCTCGGAACAGATGGCCTTGGACACCCGGAAGCGAGAGCAGTTCCAGCGGCTGAAGGAACAGTTTGTGAAGGACCAGGAGCGGCGCCTGGCGGCCAGACAGGAAGAGCTAGATGAGGACTTCAGCTACGCCCCCGAGGCCCTGGAGGAGGAGCTGGAGAAGAAAGCCAGGCAGGCACTGGTTGACCACTATAGCAAGTTGTCCGCAGAGGCAGCTCGTCGGGAACAGAAGGCCCTGTGGAGAGTCCAGAGGCACCGTCTGGGAAGTGCGAGGCTTCATTTTCTTCTAGATGATGAGAAGTGCCTTCAGGAGATGCTGAGAGACATGTCTGAGGCTTGCCGGCCACAGGAGCCACTGGGTGTCCTCCCACTTGCACGCTCCCAGGTCCTGTCTGCAAGTCCTGAGCACTCAGATGGAGGCCAGAGCTGTGATCCAGGACCCCCCAAGCAGCCCGAGGATTACCTGGGCAGGCTGAATGCACCAGCGCTGCAGCCCCTGCAGTCTCCAGCAGAGGGGGCCAGGCCGTTCTCTGCTGGCCTCAGCATCACCGACTTCCTGCCTGCAGGCTCAGGGGCAGAGCAGCCTGTGCAGGACGGGACTCCTCTCCTTGATCACGCGCTGCAGGCCATCTGCTCAGACCTGTTCCTCTCACCCACAGTAAAGGCACCCTCAGCAGAGGGGACACTGCCTGTGCAGCCACAGGAATATGATTTTAGTACCATTCTGAGGCCAGCTCCGATTGCCTTGCTTTCACCAGAGTCCCCACAGGCTGTCAAAGGCAGTGAGGAACAGCAGCTGTGGGTGGACACACGTGTGACGCCGGATGAGTGTGCACCAGACACTCAGGTGCCTCTGCCGTGCCCGCTGAGGCATGGTGCTACACAGGAGTCCAGCAGCCAGCCCCCTGGGTGGTCCCCCTCAACCACGTTAGAGGCAACTGCTCCAGCAGAGGACTGTGCTGCTGGAACAGCTGCCTCCCGGCCACGCTGGAACATCCATGGCCATGTGTCGGATGCCAGCATCCGGGTTGGGGAGAACGTGTCAGATGTGGCTGCCTCCCGGCCACGCTGGAACGTCCACGGCCATGTGTCAGATGCCAGCATCCGGGTTGGAGAGAATGTGTCAGATGTGGCNNNNNNNNNNNNNNNNNNNNNNNTCCACGGCCATGTGTCAGATGCCAGCATCCGGGTTGGAGAGAATGTGTCAGATGTGGCTGCCTCCCGGCCACGCTGGAACATCCACGGCCATGTGTCAGATGCCAGCATCCGGGTTGGGGAGAACGTGTCAGATGTGGCTGCCTCCCGGCCACGTTGGAATATCCATGGGCATGTCTCAGACGCCAGCATCCAAATCGGGGAAACCGTGTCAGATGTGGCTTCTTCCTGGCCATGCTGGGATGCCCACACCACCCAGCCTACATTCCTAGAGCCTGAGTCCAACCCTCCCAGGCTGCCCTACAGCCGCCCTAGCCACAGGTCCCAGCCAGGCAGCCTGGAAATAGAGAGCCCTGCTCTGGAATGTGGGCCACCACTGCGCACAGAAGCAGAGCCTGCCACCAGATCCCCTGGAGCAGGCAGTTGGGAGGATGGTGGCGTCCAGGACTTGCCCTTTGCTGTGGCCAAGCCGGGTGCTCTGGGAGAGAGTGTCCTCCAGGAGCCAGGCCCAGGGTGGAGCAGGGACACCGAGGACCTGTCACCACGCCGGCCTCTGGACTCGCAGGAAGACACAGCTGCCCCAGGGTGTCCTGGCCCCGGTGAGGTGGAGGCGGAGGCAGACACAGAGGTGGAGGCCCGGCGCCAGGGTGAGGAGCAGGCCTACCTGGCTGGCCTGGCAAGGCTGTACCACCTGGAGCAGTACCCGGACAGCTACGAGGCCATGTCGGAGCCCCCCGTCGCCCAGCTCGTCCATCATGTACTGCCCCGGGCCTTCACCTTCCCCGTGGACCCCCAGGTCCAGCCGGCCGTGGGTGAGACTGCAGTGCAGCTGAGCGAGCTGCTGACACTGCCTGTGCTCATGAAGTGCTCCCTCACAGCCCCGCTGGCTGCCCATGTCTCCTTGGTAAATAAAGCTGCGGTGGACTACTTCTTTGTGGAGCTGCACCTGGAGTCACACTTCGAGGCGCTGCGGCACTTTCTGCTGATGGAGGATGGGGAGTTCGCACAGTCCCTTAGCGACCTGCTCTTTGAGAAGCTTGGGGCCGGGCAGACTCCTGGGGAGTTGCTCAGCCCACTGGCCCTCAACTGCATCCTGAGCAAGGCCCTGCAGTGCAGCCTCCGTGGGGACTCGCCACATGCTGCTGGACTCTCCTTTGCCCTCAAGCACCTGCCTGAGGTCTTCGCCCCCAACACGCCAGACGTGCTGAGCTGCCTGGAGCTCAGGTACAAGGTGGACTGGCCGCTCAACATCATCATCACCGAGAGCTGCCTGAGCAAGTACGGTGCCATCTTCTCCTTCCTCCTGCAGCTGAAGCTCATGATGTGGACACTGAAGGACATCTGCTTCCACCTTAAGCGCACAGCCCTTGTGAGCCATGCGGCTGGCTCAGTGCAGTTCCGCCAGCTGCAGCTGTTCAAGCATGAGATGCAGCACTTTGTGAAGGTCACCCAGGGCTACATTGCCAACCAGATCCTGCATGTCAGTTGGTGCGAGTTCAGGGCCCGGCTGGCCACAGTAAGCAACCTGGAAGAGATCCAGCGTGCCCATGCTGAGTACCTACACAAGGCTGTCTTCAGGGGTCTGCTGACGGAGAAGGCAGCACCTGTTATGAACATCATCCATAGCATCTTCAGCCTGGTGCTCAAGTTTCGCAGCCAGCTCATCTCCCAGGCCTGGGGGCCAGCTACTGGCCCCCAGGGCACAGAGCACCCCAACTTCGCCCTCATGCAGCAGTCCTACAGCACCTTCAAGTACTACTCCCATTTCCTCTTCAAAGTGGTGACCAAGCTGGTGAACCGAGGCTACCAGCCCCACCTGGAGGACTTCCTGCTGCGCATCAATTTCAACAGCTACTACCAGGATGCATGA

Related Sequences

XP_004845394.1 Protein

Tubgcp6 PREDICTED: gamma-tubulin complex component 6 [Heterocephalus glaber]

Length: 1698 aa      
>XP_004845394.1
MASITQLFDDLCEALLPAAQPRPGQRSVDRKRTKQSLKRVAYNALFTNLFQEDARPLQSDLSKLPVRNKVLMLSFDLRVGGLGPEADRLEELVEGLEAAPCCPLLEVGSVLTLLVQLAGSGPPQILQRKRDYFFNNKHAGRNVPYSGYDCCDLSVFEMDVQSFISREEHLCHSMIQETLQVMEAAPGTALPTVGLFSFGDPCGDRFERDTRVSLFGALVHSRTYDMDVRLDFPPVPDSADLSGLAIKVPQSVDQWEDEGFQSASNLTPDSQSEPSMTPDVDLWEAALTYEVSKRRCWERIGCPPGHREEPYLTEAGRDTFDRFCRLRQEELQVLSGGPLQAPRPVLVTEQELVKDSLNVLLGVASATFSLCQPAQAFVVARGVHVSGASPESISSILSEVAAYGTCYTRLSHFSLQPALGSSCSRGLVFQAFTSGLRRYLQYYRACVLATPPTLSLLTIGFLFKKLGRQLRYLAELCGVGAMLLGTGGGEPRAVFPTGVRLLSYLYQEALDNCSNEHYPVLLSLLKTSCEPYTRFIRDWVYSGVLGDVYGEFMIQGNDEYLGCRDKSYWTHGFALISKEVEDCVPVFLRHVAHDVYICGKTINLLKLCCPQHYLCWSDIPVPRISVIFSLEELKEVEKDCAVYVGRMERVARHSSISKEEKELRMEIAKQELIAHAREAASRVLRELSDRQTSEQMALDTRKREQFQRLKEQFVKDQERRLAARQEELDEDFSYAPEALEEELEKKARQALVDHYSKLSAEAARREQKALWRVQRHRLGSARLHFLLDDEKCLQEMLRDMSEACRPQEPLGVLPLARSQVLSASPEHSDGGQSCDPGPPKQPEDYLGRLNAPALQPLQSPAEGARPFSAGLSITDFLPAGSGAEQPVQDGTPLLDHALQAICSDLFLSPTVKAPSAEGTLPVQPQEYDFSTILRPAPIALLSPESPQAVKGSEEQQLWVDTRVTPDECAPDTQVPLPCPLRHGATQESSSQPPGWSPSTTLEATAPAEDCAAGTAASRPRWNIHGHVSDASIRVGENVSDVAASRPRWNVHGHVSDASIRVGENVSDVAXXXXXXXXHGHVSDASIRVGENVSDVAASRPRWNIHGHVSDASIRVGENVSDVAASRPRWNIHGHVSDASIQIGETVSDVASSWPCWDAHTTQPTFLEPESNPPRLPYSRPSHRSQPGSLEIESPALECGPPLRTEAEPATRSPGAGSWEDGGVQDLPFAVAKPGALGESVLQEPGPGWSRDTEDLSPRRPLDSQEDTAAPGCPGPGEVEAEADTEVEARRQGEEQAYLAGLARLYHLEQYPDSYEAMSEPPVAQLVHHVLPRAFTFPVDPQVQPAVGETAVQLSELLTLPVLMKCSLTAPLAAHVSLVNKAAVDYFFVELHLESHFEALRHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLSPLALNCILSKALQCSLRGDSPHAAGLSFALKHLPEVFAPNTPDVLSCLELRYKVDWPLNIIITESCLSKYGAIFSFLLQLKLMMWTLKDICFHLKRTALVSHAAGSVQFRQLQLFKHEMQHFVKVTQGYIANQILHVSWCEFRARLATVSNLEEIQRAHAEYLHKAVFRGLLTEKAAPVMNIIHSIFSLVLKFRSQLISQAWGPATGPQGTEHPNFALMQQSYSTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNSYYQDA