Details from NCBI annotation

Gene Symbol Hdac10
Gene Name histone deacetylase 10, transcript variant X2
Entrez Gene ID 101706833

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HDAC10 ENSCPOG00000014856 (Guinea pig)

Gene Details

histone deacetylase 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013386, Guinea pig)

Protein Percentage 85.8%
CDS Percentage 88.63%
Ka/Ks Ratio 0.32213 (Ka = 0.0809, Ks = 0.2512)

HDAC10 ENSG00000100429 (Human)

Gene Details

histone deacetylase 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000216271, Human)

Protein Percentage 78.55%
CDS Percentage 81.94%
Ka/Ks Ratio 0.26674 (Ka = 0.1357, Ks = 0.5089)

Hdac10 ENSMUSG00000062906 (Mouse)

Gene Details

histone deacetylase 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080832, Mouse)

Protein Percentage 73.53%
CDS Percentage 78.22%
Ka/Ks Ratio 0.28928 (Ka = 0.1779, Ks = 0.6151)

Hdac10 ENSRNOG00000031915 (Rat)

Gene Details

histone deacetylase 10 (Hdac10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000052717, Rat)

Protein Percentage 71.48%
CDS Percentage 75.7%
Ka/Ks Ratio 0.28789 (Ka = 0.2059, Ks = 0.7153)

Genome Location

Sequence Coding sequence

Length: 2088 bp    Location: 518553..524497   Strand: +
>XM_004845333.1
ATGGGGACTGCTCTCGTGTATCACGAGGACATGATGGCCACTCGGCTGCTCTGGGACAACTCGGAGTGCAAGATCGAGTGTCCTGAGCGCCTGGCAGCAGCCCTGGGCAGCCTCCGGCAGTGTGGCCTGGAGCAGAGGTGCCTGCATTTGGCAGCCCGAGAAGCCACGGAAGCAGAGCTGGGCCTGGTGCACAGCCCAGAGTATGTGGCCCTGGTTCGGAGGACCCAGACTCTGGGAACAGAGGAGCTCCAGGCACTTTCTGGACAGTTCGATGCTGTCTACTTCCACCCGAGCACATTTCACTGTGCCCGCCTGGCTGTGGGTGCTGTGCTGCAGCTGGTGGATGCTGTGCTGACTGGAGGCTCGAACAATGGGCTTGCCCTGGTGAGGCCTCCTGGGCACCACAGCCAGAGGGCAGCTGCCAATGGATTTTGCGTGTTTAACAATGTGGCTATAGCAGCTGAACATGCCAAGCGGAAACATGGGTTGCACAGGGTTCTCATTGTTGACTGGGATATCCACCACGGCCAGGGCATCCAGTATATCTTCGAAGATGACCCCAGTGTCCTTTACTTCTCCTGGCACCGCTATGAGCACGGACGCTTCTGGCCCTTCCTTCCAGAGTCAGATGCAGACACTGTCGGGCAGGGACAGGGCCGTGGCTTCACTGTCAACTTGCCCTGGAACCAGGTTGGGATGGGCAATGCTGACTACCTGGCTGCCTTCCTGCACGTGCTGCTCCCACTGGCCTTTGAGGGACAGATGCAGGCCACACCAGAATGCTTTGCCCACCTCACACAGCTGCTGCAGGTGCTGGCTGGTGGCCGTGTCTGCGCAGTGTTGGAGGGTGGCTACCACCTGGAGTCCCTGGCACAGTCAGTGTGCATGACGGTACGGTCGCTGCTGGGTGACCCTGTGCCTGTCCTGTTGGGGCCCATGGCGCCATGTCAGAGTGCTCTGGAGTCCATCCAAAATGTCCGGGCAGCCCAGGCCCCTCACTGGAAGAGCCTCCAGCAGCAAGATATGGCCCCAGTACTGAGTCCCAGCACCCACTCCCCAGAGGGGAGGCCCCTGCTGCCGCTGCCTGGGGATCCTGTATGTAAGGCAGAGGCAGAGGTGGCATCGCTGAGCTTCCTCCTGGATCAGCAGCACTTCCACCCCACACCCCCTGTTCGAATGGCTGTTGCCCTGACTGCTCCAGACACTGCCCTGTCCCTGTCCCCTGATGTGCTTCGTCAGGAGGGATCAGCCCCGAAGTGGGAGACAGAAGCCTGGGCCAGGCCACATGAGTCCCTGGCCCAGGATGAGGCCCTCACTGCACTTGGGAAGCTCCTGTACCTCTTAAATGGGATTCTGGATGGGAAGGTAAGCAGTGGAGTCGCATCCACTCCAGCACCTGCTGCAGCAGCCACCTTGCACGTGGCCATTCGGCGAGGTCTGTCTCTCGGAGCCCAGAGGGTTTTTTGTGTGGTACTGGGAGAGCTGGATCGGCCACTGGACCTTCCTGATGATGGGAGGATTCTGTGGCTGAACATCCGGGGCAAGGAAGTAGTCACACTGTCCATGTTCCATGTCTCCATGCCACTGCCAGGGACGACTGGAGGGTTCCTGAGCTGCGTCTTGGGCCTGGTGCTGCCCATGGCTTATGGCTTCCAGCCTGACCTGGTGCTGGTGGCGCTGGGGCCTGACCATCGCCTCCAGGACCCCCAGGCTGCTCTCCTGGCTGGAGTGCTCCGGGTGCCGGCGGGGGGCCGAGTCCTGGTCCTCCTTGAGGAGGAATCTGCACCCGAACTTGCGCGGGCCCTAGCCCAGGCGTTGAATGGAGAGGCGCTACCCAGCCTGCGCCCTTTCTCTACGGCCTCTCCAGAGGACCTCCAGGCCTTGAGGAGCCTGCGAGCGCAGCTGCAGCCGCGGTGGGAGATGCTGCGGGTGGCGGCCTCAGAGCCCGTGCAGAGGCGCGGAGACTCCGAGCCTAGCGGTTCTGAGCTCCTTCTGGAACCTCCTTCCGGGCCGCCCACCCCGGGAGTGCCGCGCCGTCAGTTCCTGGGGGCCTCGGCCCCGCCCGCGCCCCGCCCAGCCCATCAGTAA

Related Sequences

XP_004845390.1 Protein

Hdac10 PREDICTED: histone deacetylase 10 isoform X2 [Heterocephalus glaber]

Length: 695 aa      View alignments
>XP_004845390.1
MGTALVYHEDMMATRLLWDNSECKIECPERLAAALGSLRQCGLEQRCLHLAAREATEAELGLVHSPEYVALVRRTQTLGTEELQALSGQFDAVYFHPSTFHCARLAVGAVLQLVDAVLTGGSNNGLALVRPPGHHSQRAAANGFCVFNNVAIAAEHAKRKHGLHRVLIVDWDIHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPFLPESDADTVGQGQGRGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLAQSVCMTVRSLLGDPVPVLLGPMAPCQSALESIQNVRAAQAPHWKSLQQQDMAPVLSPSTHSPEGRPLLPLPGDPVCKAEAEVASLSFLLDQQHFHPTPPVRMAVALTAPDTALSLSPDVLRQEGSAPKWETEAWARPHESLAQDEALTALGKLLYLLNGILDGKVSSGVASTPAPAAAATLHVAIRRGLSLGAQRVFCVVLGELDRPLDLPDDGRILWLNIRGKEVVTLSMFHVSMPLPGTTGGFLSCVLGLVLPMAYGFQPDLVLVALGPDHRLQDPQAALLAGVLRVPAGGRVLVLLEEESAPELARALAQALNGEALPSLRPFSTASPEDLQALRSLRAQLQPRWEMLRVAASEPVQRRGDSEPSGSELLLEPPSGPPTPGVPRRQFLGASAPPAPRPAHQ