Details from NCBI annotation

Gene Symbol Cpt1b
Gene Name carnitine palmitoyltransferase 1B (muscle), transcript variant X4
Entrez Gene ID 101724285

Database interlinks

Part of NW_004624752.1 (Scaffold)

For more information consult the page for NW_004624752.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CPT1B ENSCPOG00000007614 (Guinea pig)

Gene Details

carnitine palmitoyltransferase 1B (muscle)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006862, Guinea pig)

Protein Percentage 94.82%
CDS Percentage 93.22%
Ka/Ks Ratio 0.10057 (Ka = 0.0241, Ks = 0.24)

CPT1B ENSG00000205560 (Human)

Gene Details

carnitine palmitoyltransferase 1B (muscle)

External Links

Gene Match (Ensembl Protein ID: ENSP00000353945, Human)

Protein Percentage 90.16%
CDS Percentage 88.21%
Ka/Ks Ratio 0.10888 (Ka = 0.053, Ks = 0.487)

Cpt1b ENSMUSG00000078937 (Mouse)

Gene Details

carnitine palmitoyltransferase 1b, muscle

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104936, Mouse)

Protein Percentage 89.38%
CDS Percentage 86.23%
Ka/Ks Ratio 0.09 (Ka = 0.0565, Ks = 0.6281)

Cpt1b ENSRNOG00000010438 (Rat)

Gene Details

carnitine palmitoyltransferase 1b, muscle (Cpt1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013985, Rat)

Protein Percentage 88.21%
CDS Percentage 85.02%
Ka/Ks Ratio 0.09356 (Ka = 0.0645, Ks = 0.6898)

Genome Location

Sequence Coding sequence

Length: 2319 bp    Location: 191414..200468   Strand: +
>XM_004845290.1
ATGGCGGAAGCACACCAGGCCGTGGCCTTCCAGTTCACCGTGACCCCAGACGGGGTGGACTTCCGGCTCAGTAGGGAAGCCCTGAAACACATCTACCTGTCCGGGATCAACTCCTGGAAGAAACGCCTGATTCGCATCAAGAATGGCATTCTTAGGGGTGTGTACCCTGGCAGCCCCACCAGCTGGCTGGCCATTGTCATGGCAACGGTGGGTTTCTCCTACTGCGAAGTGGACATCTCTATGGGGCTGGTCTGTTGTATCCAGAGGTGCCTCCCTGAGAGGTGTGGCCCCTACCAGACCCCACAGACTCGGGCACTTCTCAGCATGGCCATCTTCTCCACAGGGGTCTGGGTGACAGGCATCTTCTTATTCCGCCAAACCCTGAAGCTGCTGCTTTCCTACCATGGGTGGATGTTTGAGATGCATGGCAAGACCAGCCACTTCACCAAGATCTGGGCTATCGGTGTTCGCCTTCTGTCCAGCCAGCGGCCCATGCTCTACAGCTTCCAGACATCTCTGCCCAAGCTTCCTGTGCCCGGCGTGCGAGCCACAATTCAGAGGTACCTGGAGTCTGTGCAGCCCTTGTTGGATGATGAGGAATATTACCGCATGGAGACCTTAGCCAAAGAATTCCAGGACAAGACTGCCCCCAGGCTGCAGAAGTACCTGATACTCAAGTCGTGGTGGGCAACTAACTACGTGAGTGACTGGTGGGAAGAGTACATCTACCTCAGAGGCAGAACCCCACTCACGGTGAACAGCAACTATTACGTGATGGACCTTGTGCTTGTCAAGAACACAGATGTGCAGGCTGCCCGCCTGGGAAATGCTGTCCATGCCATGATCATGTATCGTCGCAAACTGGACCGTGAAGAGATCAAGCCTGTGATGGCACTAGGCATGGTGCCCATGTGCAGCTACCAGATGGAAAGGATGTTCAACACCACTCGCATCCCTGGCAAGGAGACAGATGTGTTGCAGCACCTCGCGGAGAGCAGACACGTGGCCGTCTACCACAAGGGCCGCTTCTTCAAGGTGTGGCTCTATGAGGGCTCTCGCCTGCTTAAGCCTCGGGACTTGGAGATGCAGTTCCAGAGGATCCTGGACGACCCCTCCCCACCTCAGCCTGGGGAGGAAAAGCTGGCGGCCCTCACTGCAGGGGGAAGGGTAGAGTGGGCACAGGCACGCCAGACCTTCTTCAGCTCTGGCAAGAACAAGGCTTCTCTGGATGCCATTGAGCGCGCTGCTTTCTTTGTGGCCCTGGACGAGGAGTCCCACTGCTACAGCCCTGATGATGAGGCCAGTCTCAGCCTGTATGGCAAGGCTCTGCTACATGGCAACTGCTACAACAGGTGGTTTGACAAGTCTTTCACTCTTATTTCCTTCAAGAATGGTGTGTTGGGCCTCAACACAGAACATGCATGGGCAGATGCCCCTATTATTGGGCATCTATGGGAGTTTGTCCTAGGCACGGACACCTTACACCTGGGCTACACAGAAAGTGGGCACTGCCTGGGCGAACCAAACCCGATGTTGGCACCTCCTCAGCGGCTCCAATGGGACATTCCTGAGCAGTGTCAGGCTGTCATCGAGAGTTCCTACCAAGTAGCCAAGGCACTGGCAGACGATGTGGAGTTGTACTGCTTCCAGTTCTTGCCCTTTGGTAAGGGCCTTATCAAGAAGTGTCGGACCAGCCCTGATGCCTTCGTGCAAATTGCCCTGCAGCTGGCTCACTTCCGGGACAAGGGCAAGTTCTGCCTGACCTATGAGGCCTCAATGACCAGAATGTTCCGAGAAGGCCGGACCGAGACTGTGCGTTCTTGTACCAGCGAGTCTAAAGTCTTTGTGCAGGCCATGACGAAGGGGCCCCACGTGAAAGCAGACCTCCAAAATCTCTTCCGGAAAGCTTCAGAGAAGCACCAGAACATGTACCGCCTAGCCATGACGGGCGCTGGCATTGACAGGCACCTCTTCTGCCTTTACTTGGTCTCTAAGTACCTGGGGGTCCGCTCCCCATTCCTGGCAGAGGTGCTATCGGAACCCTGGCGCCTCTCCACCAGCCAGATCCCTCAGTCCCAGATCCGCATGTTTGACCCAAACCAGTATCCCAATTACCTGGCCGCAGGAGGTGGCTTTGGCCCTGTGGCAGATGATGGGTATGGGGTCTCCTATATGATTGCAGGTGAAAACACCATCTTCTTCCACGTCTCTAGCAAGTTCTCAAGTTCAGAGACGAATGCTCAACGCTTTGGGAACCACATCCGGCAAGCCCTGTTGGACATCGCTGATCTTTTCCAAGTTCCCAAAGCTAACAACTGA

Related Sequences

XP_004845347.1 Protein

Cpt1b PREDICTED: carnitine O-palmitoyltransferase 1, muscle isoform isoform X4 [Heterocephalus glaber]

Length: 772 aa      View alignments
>XP_004845347.1
MAEAHQAVAFQFTVTPDGVDFRLSREALKHIYLSGINSWKKRLIRIKNGILRGVYPGSPTSWLAIVMATVGFSYCEVDISMGLVCCIQRCLPERCGPYQTPQTRALLSMAIFSTGVWVTGIFLFRQTLKLLLSYHGWMFEMHGKTSHFTKIWAIGVRLLSSQRPMLYSFQTSLPKLPVPGVRATIQRYLESVQPLLDDEEYYRMETLAKEFQDKTAPRLQKYLILKSWWATNYVSDWWEEYIYLRGRTPLTVNSNYYVMDLVLVKNTDVQAARLGNAVHAMIMYRRKLDREEIKPVMALGMVPMCSYQMERMFNTTRIPGKETDVLQHLAESRHVAVYHKGRFFKVWLYEGSRLLKPRDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQTFFSSGKNKASLDAIERAAFFVALDEESHCYSPDDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGVLGLNTEHAWADAPIIGHLWEFVLGTDTLHLGYTESGHCLGEPNPMLAPPQRLQWDIPEQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDKGKFCLTYEASMTRMFREGRTETVRSCTSESKVFVQAMTKGPHVKADLQNLFRKASEKHQNMYRLAMTGAGIDRHLFCLYLVSKYLGVRSPFLAEVLSEPWRLSTSQIPQSQIRMFDPNQYPNYLAAGGGFGPVADDGYGVSYMIAGENTIFFHVSSKFSSSETNAQRFGNHIRQALLDIADLFQVPKANN