Details from NCBI annotation

Gene Symbol Cln5
Gene Name ceroid-lipofuscinosis, neuronal 5
Entrez Gene ID 101715781

Database interlinks

Part of NW_004624751.1 (Scaffold)

For more information consult the page for NW_004624751.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLN5 ENSCPOG00000020125 (Guinea pig)

Gene Details

ceroid-lipofuscinosis, neuronal 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018302, Guinea pig)

Protein Percentage 90.72%
CDS Percentage 91.82%
Ka/Ks Ratio 0.19272 (Ka = 0.0464, Ks = 0.2409)

CLN5 ENSG00000102805 (Human)

Gene Details

ceroid-lipofuscinosis, neuronal 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000366673, Human)

Protein Percentage 85.43%
CDS Percentage 89.05%
Ka/Ks Ratio 0.27342 (Ka = 0.0766, Ks = 0.2802)

Cln5 ENSMUSG00000022125 (Mouse)

Gene Details

ceroid-lipofuscinosis, neuronal 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022721, Mouse)

Protein Percentage 79.12%
CDS Percentage 81.67%
Ka/Ks Ratio 0.19026 (Ka = 0.115, Ks = 0.6045)

Cln5 ENSRNOG00000009759 (Rat)

Gene Details

ceroid-lipofuscinosis, neuronal 5 (Cln5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012927, Rat)

Protein Percentage 81.01%
CDS Percentage 81.31%
Ka/Ks Ratio 0.15391 (Ka = 0.1037, Ks = 0.6741)

Genome Location

Sequence Coding sequence

Length: 1053 bp    Location: 23404761..23394804   Strand: -
>XM_004845273.1
ATGGTGCTGGAGGGGGGTGCGGTGCCGGGGGGTGCGGGGGGTGCGCCGCGGCGCTGGGTCCTGACGCTGCTGCTCTGGCTGGCGGCGACTCCGGGCTGGCCTCGGGCCTCGGGCGGGCCCTCCCGGCGCCACTGGCCCGTGCCCTACAAACGCTTTTCCTTCCGTCCAGAACCAGATCCTTACTGTCAAGCTAAGTACACTTTCTGTCCCACTGGCTCGCCGATCCCAGTTATGAAGAATGATGATGTCATTGAAGTCTTTAGACTACAAACCCCTGTATGGGAATTTAAATACGGAGACCTTCTAGGACATTTTAAAATTATGCATGATGCCATTGGATTCAGGAATACCTTAACTGGCAAGAACTACACAATGGAATGGTATGAACTTTTCCAACTTGGCAATTGTACATTTCCCCATCTCAGACCTGAAATGGATGCCCCTTTCTGGTGTAATCAAGGAGCTGCCTGCTTTTTTGAAAGAATTGATGATATCCACTGGAAGGAAAATGGGACATTAGTTCTGGTAGCAACCATATCAGGAAACACATTTAACAAAATGGCAAAGTGGGTGAAACAGGACAATGAAACAGGAATTTATTATGAGACATGGACTGCCCAAGCCAGCCCAGAAAAAGGGGCAGAGACATGGTTTGAGTCCTACGACTGTTCAAAATTTGTGTTACGGACATATGAGAAGTTGGCTGAACTTGGAGCAGAGTTCAAGAAGATAGACACCAACTATACAAGAATATTTCTTTACAGTGGAGAACCAACTTATTTGGGAAATGAAACATCTATTTTTGGGCCAACAGGAAATAAGACTCTTGCTTTAGCCATAAAAAGATTTTATTACCCTTTCAAACCACACTTGTCAACTAAAGAATTTCTGTTGAGTCTCTTGCAAATTTTTGATTCAGTGATTATGCATAGGCAGTTCTATTTGTTTTATAATTTTGAATATTGGTTCTTACCTATGAAATTCCCTTTTGTTAAAATAACATATGAAGAAATTCCTTTACCTAACAGGCACAAAACATTTCCTGGTTTATAA

Related Sequences

XP_004845330.1 Protein

Cln5 PREDICTED: ceroid-lipofuscinosis neuronal protein 5 [Heterocephalus glaber]

Length: 350 aa      View alignments
>XP_004845330.1
MVLEGGAVPGGAGGAPRRWVLTLLLWLAATPGWPRASGGPSRRHWPVPYKRFSFRPEPDPYCQAKYTFCPTGSPIPVMKNDDVIEVFRLQTPVWEFKYGDLLGHFKIMHDAIGFRNTLTGKNYTMEWYELFQLGNCTFPHLRPEMDAPFWCNQGAACFFERIDDIHWKENGTLVLVATISGNTFNKMAKWVKQDNETGIYYETWTAQASPEKGAETWFESYDCSKFVLRTYEKLAELGAEFKKIDTNYTRIFLYSGEPTYLGNETSIFGPTGNKTLALAIKRFYYPFKPHLSTKEFLLSLLQIFDSVIMHRQFYLFYNFEYWFLPMKFPFVKITYEEIPLPNRHKTFPGL