Sequence details NCBI ID: XM_004845260.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101724999

Database interlinks

Part of NW_004624751.1 (Scaffold)

For more information consult the page for NW_004624751.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AHRR ENSCPOG00000005984 (Guinea pig)

Gene Details

aryl-hydrocarbon receptor repressor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005402, Guinea pig)

Protein Percentage 81.93%
CDS Percentage 86.02%
Ka/Ks Ratio 0.29996 (Ka = 0.1022, Ks = 0.3408)

AHRR ENSG00000063438 (Human)

Gene Details

aryl-hydrocarbon receptor repressor

External Links

Gene Match (Ensembl Protein ID: ENSP00000323816, Human)

Protein Percentage 66.02%
CDS Percentage 73.64%
Ka/Ks Ratio 0.25463 (Ka = 0.2266, Ks = 0.8901)

Ahrr ENSMUSG00000021575 (Mouse)

Gene Details

aryl-hydrocarbon receptor repressor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022059, Mouse)

Protein Percentage 65.1%
CDS Percentage 72.87%
Ka/Ks Ratio 0.30643 (Ka = 0.2417, Ks = 0.7888)

Ahrr ENSRNOG00000014721 (Rat)

Gene Details

aryl-hydrocarbon receptor repressor (Ahrr), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019806, Rat)

Protein Percentage 64.81%
CDS Percentage 71.85%
Ka/Ks Ratio 0.27149 (Ka = 0.2455, Ks = 0.9044)

Genome Location

Sequence Coding sequence

Length: 2460 bp    Location: 128283..209546   Strand: +
Raw sequence   
>XM_004845260.1
ATGTTCAGTCCTTGTGATTCCCAAAATGCCGCCACGGAGCGCGGGAGTGGACAGGCGATTCCTTCCGCTGCCCACACGAGTGCGCAGCGTGGCTCCGGGTGCGAGGGGCCCACGCTGCGGGCGGACGCCAGGCGCCGGGGACAGAGGAGGGCGAGGCCTGGGCTTCCGACGGCGAGCACGGGGGACCCCACCCCGCGCGCGGAGACCCAGGGCCACGGGACCGAGCCGTGCGCGCCCCCTGCCGCCGCCGCCGCCGCTGCCGGGCTCTCGGGGCGGGGCGCGGGCCGGGGTGGTGCCTCCTCCGCCCCGCCCCGTCCCCGGGATGCGGCGCCCACTGCCGCGCGGCCACAGCTCCCGGCGTGCGGCTCCCCCGCGGCGCCGGCCTCGGGGCTGAAGACAATGATTCCACTGGGGGAATGCACATACGCGGGCAGGAAGAGGAGGAAACCTATCCAGAAGCGGAGGCCTGCCGTGGGGGCCGAGACGTCGAATCCCTCCAAGCGGCACCGGGACCGCCTCAACGCGGAGCTGGACCACCTGGCCAGCCTGCTGCCCTTCCCTCCTGACATCATCTCCAAGCTGGACAAGCTGTCCGTCCTGCGCCTCAGCGTCAGTTACCTCCGGGTGAAGAGCTTCTTCCAAGGTGGGGCTCACCGGTGCCCACCTGAGACTCGCACCCTCTCACCTGGAGACAGCCCACAAGGAGGGGCCCCCGTGCAGGAGGGGCAGCTTCTGCTGGAGTCTCTCAATGGCTTCGCTCTGGTTGTGAGTGCAGAAGGGATGATTTTTTACGCATCGGCCACGATTGTGGACTATTTGGGCTTCCACCAGACAGACGTAATGCACCAGAACATTTATGACTACATCCACGTGGATGACCGCCAGGACTTCTGCCGGCAGCTCCACTGGGCCATGGATCCCCCACAGGCGGTTGTGGGCAGCCCCCACACATGGAGGCAGGTGGACAACACGGTCCTGGGGAGGTTGCTCAGGGCCCAGGAAGGGGGCATGGGCTCACCCACTGAGTACTCAGCCTTCCTGACACGTTGCTTCATCTGCCGTGTACGCTGCCTACTGGATAGCACCTCCGGTTTTCTGATGATGCAGTTTCAAGGAAAACTAAGATTCCTGTTGGGACAGAAGAAGAAGGCGCCGTCGGGAGCGGTCCTGCCCCCACGGCTCGCGCTGTTCTGCACCGTGGTGCCAGTCCTCCTGCCCTCCACAGCGGAGATGAAAATGAAGAGCACATATCTGAGGGTGAAGCACAGGGCAGAGGTGCCAGCCATGACAGACACAAGGGCAAAAGCGACCGTGAGTCTGTGTGAACCAGAACTTCATGGAAAACCCAGCTACTTAGCAGGAAGGAATGGTGAAAACAGCATCTCAATGTTCAGGGCACAAACGGATGCCTGCCACTGGGCCCGGGTCCCAGCCAGGGCTCGATGCCCCTGCCTCAGGGGGGGCATGGACCTCATCCTGGATTCCAAGGGGGCAACAAGGGACAGGGAAGAAACAGAGCAGGACAGGATGCCGAGTGGCTCCACAGGAGGGAGGACACGGAGGGAGCTGCATGTGTACAATTGCCGTCAAGAGACACCAGCACCCGGGCGGTACCTGAACTGGACCACAGAAAAGTGTGAGCAGGAAGGCGGCACCAAGCTGAAGCCACTGCCAGGCAGGAGTGAGCCCCTCTCCATGTGCACCGCATCCCCAGGCTCCTGCCTGCCCCCCCCAGGCACCGAGGGCATGTTCAGTGCCAGCAGCCTGGCTACCTTCAGAAATCCTCCAGGCCATGTCCCCAGTGCCTACTGTGGCCGGATGAGCAGAGCCTGGCGGGATGTCTCTCAGGGCCAGGCGCCCCCACCTGCCTGCCGCACTGGAGCGCAGCGCTTCACCTCTGGTGGCTACTGCACAGAGGATGCGAAGCCTGCTGGCCTGCTGATGCCCCCAGGTACCCCGTGCAATCCCATGCTGGCACTGGAGGTACCAATCAAGATGGAAAATGACTCTGGGTCGGAGGACACAGCAGATGGTTGCACCCCTAGCCAAGTGTGGCTGGGAGCCAGTGATGTCACCAAGAGACATCTGGTCACTTTCCCCACCAGGATGCACCTGAAAGCAGAGCCAGAGTGCAGGCACCAGGTCTATAGCCAGCCCCTCAGTGTGGGCATGCTGGCAGCCCACCCTCAGAGCAAGGTCACTGCCGGGCTCTGCCGGGAGCTGGCCCCGTTCTACCCTGCACACAACTCCTGCCTTGAGCTAGGGCCGCCCCGCCACTTCTGCACCCTGGGCCACAGTGAGTGCAGGGCACCGGAGGTCACACCCTTGGTCAAGCGTGAACCCCTGGACTCACCCCCATGGGCTGCAGCGGGCCAGGGTGCTGTGCCCGGGGTCTTCCCCAAAAGTGCTGCTGCTGTTCAGATTCCACCCAGCGCTCCTGAGGCTCCTTTCCTGCTGTAG

Related Sequences

XP_004845317.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor repressor [Heterocephalus glaber]

Length: 819 aa      View alignments
>XP_004845317.1
MFSPCDSQNAATERGSGQAIPSAAHTSAQRGSGCEGPTLRADARRRGQRRARPGLPTASTGDPTPRAETQGHGTEPCAPPAAAAAAAGLSGRGAGRGGASSAPPRPRDAAPTAARPQLPACGSPAAPASGLKTMIPLGECTYAGRKRRKPIQKRRPAVGAETSNPSKRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLSVSYLRVKSFFQGGAHRCPPETRTLSPGDSPQGGAPVQEGQLLLESLNGFALVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQAVVGSPHTWRQVDNTVLGRLLRAQEGGMGSPTEYSAFLTRCFICRVRCLLDSTSGFLMMQFQGKLRFLLGQKKKAPSGAVLPPRLALFCTVVPVLLPSTAEMKMKSTYLRVKHRAEVPAMTDTRAKATVSLCEPELHGKPSYLAGRNGENSISMFRAQTDACHWARVPARARCPCLRGGMDLILDSKGATRDREETEQDRMPSGSTGGRTRRELHVYNCRQETPAPGRYLNWTTEKCEQEGGTKLKPLPGRSEPLSMCTASPGSCLPPPGTEGMFSASSLATFRNPPGHVPSAYCGRMSRAWRDVSQGQAPPPACRTGAQRFTSGGYCTEDAKPAGLLMPPGTPCNPMLALEVPIKMENDSGSEDTADGCTPSQVWLGASDVTKRHLVTFPTRMHLKAEPECRHQVYSQPLSVGMLAAHPQSKVTAGLCRELAPFYPAHNSCLELGPPRHFCTLGHSECRAPEVTPLVKREPLDSPPWAAAGQGAVPGVFPKSAAAVQIPPSAPEAPFLL