Sequence details NCBI ID: XM_004845256.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pibf1
Gene Name progesterone immunomodulatory binding factor 1
Entrez Gene ID 101722859

Database interlinks

Part of NW_004624751.1 (Scaffold)

For more information consult the page for NW_004624751.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PIBF1 ENSCPOG00000007188 (Guinea pig)

Gene Details

progesterone immunomodulatory binding factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006482, Guinea pig)

Protein Percentage 92.99%
CDS Percentage 92.99%
Ka/Ks Ratio 0.16764 (Ka = 0.0339, Ks = 0.2021)

PIBF1 ENSG00000083535 (Human)

Gene Details

progesterone immunomodulatory binding factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000317144, Human)

Protein Percentage 91.28%
CDS Percentage 90.36%
Ka/Ks Ratio 0.14363 (Ka = 0.0454, Ks = 0.316)

Pibf1 ENSMUSG00000022064 (Mouse)

Gene Details

progesterone immunomodulatory binding factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022650, Mouse)

Protein Percentage 88.49%
CDS Percentage 85.76%
Ka/Ks Ratio 0.09714 (Ka = 0.0607, Ks = 0.6248)

Pibf1 ENSRNOG00000009208 (Rat)

Gene Details

Protein Pibf1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037643, Rat)

Protein Percentage 88.9%
CDS Percentage 86.31%
Ka/Ks Ratio 0.09509 (Ka = 0.0575, Ks = 0.6042)

Genome Location

Sequence Coding sequence

Length: 2307 bp    Location: 27760393..27544657   Strand: -
Raw sequence   
>XM_004845256.1
ATGTCTCGAAAAATTTCTAAAGAATCAAAAAAAGTGAACATCTCTAGTTCTCTGGAATCTGAAGATATTAGTTTAGAAACAACAATTCCTACAGATGATATTTCCTCATCTGAAGAACGAGAAGGTAAAGTCAAAATCACCAAGCAGCTAATTGAACGAAAAGAACTGCTTCACAATATTCAGTTATTGAAAATAGAGTTATCTCAGAAAAATATGATGATCGACAATTTGAAAGTGGATTATCTTACAAAGATTGAAGAATTAGAGGAGAAACTTAATGATGCACTTCACCAGAAGCAGCTACTAACTTTGAGATTAGACAACCAATTGACTTTTCAACAGAAGGATACCAGAAAATATCAAGAACTAATGAAACAAGAAATGGAAACCATTTTATTGAGACAGAAACAACTAGAAGAAACAAATCATCAGCTAAGAGAGAAAGCTGGAGATGTTCGTCGAAACTTGCGTGACTTGCGTGACTTTGAGTTGACAGAAGAGCAATATACGAAACTAAAAGCTTTTCCTGAAGATCAGCTTTCTATTCCTGAATATGTATCTATTCGGTTCTATGAACTGATGAGTCCATTAAGAAAGGAAATCTGTGAACTGCAGGTGAAAAAAAATGACCTATTGGAAGAATTAAGTACAAATAAAGACAAACTGAAGCAACTGACAGAGACATATGAGGAAGATCGAAGGAACTACTCTGAACTTCAAATTAGATGTCAACGTTTGGCCTTAGAATTAGCAGACACAAAACAATTAATTCGGCAAGGTGACTACCGTCAAGAGAACTATGATAAAGTCAAGAGTGAACGTGATGCACTTGAACAAGAAGTACTTGAGCTTAGGAGAAAACATGAAATACTTGAAGCCACTCATCTAACTCAAGCTAAAGAGAGAAGTGAATTATCGAAAGAGGTAGTTACCTTACAGCAGACTGTCACTCTGCTGCAGAAGGATAAAGAATACCTCAGTCGCCAGAACACAGAGCTCAGTGTGCGCCGAGCCCACGAGGAGGATCGCCTCGAAAGGCTTCAGCTTCAACTGGAGGAAACCAAGAAGGCCAGGGAAGAGATGTATGAGAAATATGTAACATCCAGAGACCATTATAAGACAGAATATGAAAATAAACTACATGATGAACTGGAACAAATCAAGTTGAAAACTAATCAAGAAATTGATCAGCTTCGAAGTGCCTCCAGGGAAATGTATGAAAGAGAAAACAGAAATCTTCGAGAAGTGAGGGATAATGCTTTGGCTGAAAAGGACCGAGCAGTGATGGCGGAAAAGGATGCTTTAGAAAAACATGATCAGCTTTTAGACAGGTACAGAGAACTACAACTTAGTACAGAAAGCAAGGTAGCAGAATTTCTTCATCAAAGTAAATTAAAGTCTTTTGAAAGTGAACGTGTTCAACTTCTACAGGAAGAAACTGCAAGGAATCTCACGCAGTGTCAGTTGGAATGTGAAAAATATCAGAAGAAATTAGAGATTTTAACTAAAGAATTTTATAGTCTCCAAGCCTCTTCTGAAAAACGCATTACTGAACTTCAAGCACAGAACTCTGAGCATCAGGCAAGACTGGACATTTATGAGAAACTGGAAAAAGAACTTGATGAAATAGTAATGCAGACTGCAGAAATTGAAAATGAAGATGAGGCTGAGAGGATTCTTTTCTCCTATGGCTATGGTGCTAATGTTCCTACAACAGCCAAAAGGCGACTAAAGCAAAGTGTCCACTTGGCAAGAAGAGTGCTTCAGTTACAAAAACAAAACTCATTGATTTTAAAAGATCTGGAACATCGAAAGGACCAAGTAACACAGCTTTCACAAGAGCGTGACAGAGCCAATTCGCTGTTAAACCAGACTGAACAACCTTACAGATACCTGATTGAATCAGTACGTCAGAGAGATTCTAAGATTGATTCGCTGATGCAGTGTATAGCACAACTCGAGAAAGATGTCAGCAATTTAAATAAAGAAAAATCAGCTTTGCTACAGATGAAGAACCAAATGGCATTAGATTTAGAACAACTTCTAAATCATCGTGAGGAATTGGCAGCAATGAAGCAGATTCTCATTAATATGCATACTAGACACTCCGAGAATAACTTACTTCTTACTAAAATGCAATCGAAAGATGTGGCAGAGAACCAGACATCCAAGACTCTGAATGTGCCTAGAGAACAGGAGGACGGTGTGTTCATACCCAAGCCAACCCTCTTTACTAAGAAGGAAGCACCCGAATGGTCTAAGAAGCAGAAGAAGACAGCAGGCTACACTGCGAAGGAGCAGCTCTAG

Related Sequences

XP_004845313.1 Protein

Pibf1 PREDICTED: progesterone-induced-blocking factor 1 [Heterocephalus glaber]

Length: 768 aa      View alignments
>XP_004845313.1
MSRKISKESKKVNISSSLESEDISLETTIPTDDISSSEEREGKVKITKQLIERKELLHNIQLLKIELSQKNMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDNQLTFQQKDTRKYQELMKQEMETILLRQKQLEETNHQLREKAGDVRRNLRDLRDFELTEEQYTKLKAFPEDQLSIPEYVSIRFYELMSPLRKEICELQVKKNDLLEELSTNKDKLKQLTETYEEDRRNYSELQIRCQRLALELADTKQLIRQGDYRQENYDKVKSERDALEQEVLELRRKHEILEATHLTQAKERSELSKEVVTLQQTVTLLQKDKEYLSRQNTELSVRRAHEEDRLERLQLQLEETKKAREEMYEKYVTSRDHYKTEYENKLHDELEQIKLKTNQEIDQLRSASREMYERENRNLREVRDNALAEKDRAVMAEKDALEKHDQLLDRYRELQLSTESKVAEFLHQSKLKSFESERVQLLQEETARNLTQCQLECEKYQKKLEILTKEFYSLQASSEKRITELQAQNSEHQARLDIYEKLEKELDEIVMQTAEIENEDEAERILFSYGYGANVPTTAKRRLKQSVHLARRVLQLQKQNSLILKDLEHRKDQVTQLSQERDRANSLLNQTEQPYRYLIESVRQRDSKIDSLMQCIAQLEKDVSNLNKEKSALLQMKNQMALDLEQLLNHREELAAMKQILINMHTRHSENNLLLTKMQSKDVAENQTSKTLNVPREQEDGVFIPKPTLFTKKEAPEWSKKQKKTAGYTAKEQL