Details from NCBI annotation

Gene Symbol Irx1
Gene Name iroquois homeobox 1, transcript variant X2
Entrez Gene ID 101712473

Database interlinks

Part of NW_004624751.1 (Scaffold)

For more information consult the page for NW_004624751.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IRX1 ENSCPOG00000021147 (Guinea pig)

Gene Details

iroquois homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015072, Guinea pig)

Protein Percentage 82.04%
CDS Percentage 82.38%
Ka/Ks Ratio 0.08661 (Ka = 0.1063, Ks = 1.2277)

IRX1 ENSG00000170549 (Human)

Gene Details

iroquois homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000305244, Human)

Protein Percentage 93.07%
CDS Percentage 88.8%
Ka/Ks Ratio 0.0339 (Ka = 0.0333, Ks = 0.9835)

Irx1 ENSMUSG00000060969 (Mouse)

Gene Details

Iroquois related homeobox 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000076562, Mouse)

Protein Percentage 88.87%
CDS Percentage 84.45%
Ka/Ks Ratio 0.04101 (Ka = 0.0558, Ks = 1.3603)

Irx1 ENSRNOG00000033609 (Rat)

Gene Details

iroquois homeobox 1 (Irx1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000040590, Rat)

Protein Percentage 87.82%
CDS Percentage 84.24%
Ka/Ks Ratio 0.04691 (Ka = 0.0602, Ks = 1.2835)

Genome Location

Sequence Coding sequence

Length: 1431 bp    Location: 2010004..2014721   Strand: +
>XM_004845148.1
ATGTCCTTCCCGCAGCTGGGCTACCCGCAGTACCTGGGCGCCCCGGGGCCGGGCGCCTACACCGGCGAGCGCCCGGGTGTCCTGGCGGCGGCCGCCGCCGCCGCAGCCTCGTCGGGCCGGCCCGGGGCGGCGGAGCTGGGCGCGGGCGCGGCCGCGGTCACCTCGGTGCTGGGTATGTACGCGGCGGCCGGGCCGTACGCGGGCGCGCCCAGCTACAGCGCCTTCCTGCCCTACGCCGCCGACCTCAGCCTCTTCTCCCAGATGGGCTCGCAGTACGAACTCAAGGACAACCCCGGGGTGCACCCAGCCACCTTCGCAGCCCACACGGCCCCAGCCTATTACCCCTATGGCCAGTTCCAGTACGGGGACCCCGGGAGGCCCAAGAACGCCACGCGCGAGAGTACCAGCACGCTGAAGGCCTGGCTGAACGAGCACCGCAAGAACCCCTACCCCACCAAGGGCGAGAAGATCATGCTGGCCATCATCACCAAGATGACCCTCACGCAGGTCTCCACCTGGTTCGCCAACGCGCGCCGGCGCCTCAAGAAGGAGAACAAGGTGACGTGGGGGGCGCGCAGCAAGGACCAGGAGGACGGTGCCCTTTTCGGCAGCGACACGGAGGGCGACCCCGAGAAGGCCGAGGACGACGAGGAGATAGACCTGGAGAGCATCGACATAGACAAGATCGACGAGCACGACGGGGACCAGAGCAACGAGGACGACGAGGACAAGGCCGAGGGGCCGCGCCCGCCCGCAGCCCCCAGCGCCCTGGCCCGGGAGCGGGGCTCGCCGCTGGCGGCGCCGGACGTGCTCAAGCCCCAAGACTCGCCCCTGGGCCTGGCCAAGGAGCTCGCAGAGCCCGGCAGCACGCGGCTGCTGAGCCCGGGCGCCTCGGCCGGCGGCCTGCAGGGCACACAGCACAGCAAGCCGAAGATCTGGTCGCTGGCGGAGACGGCCACGAGCCCCGACGGCGCGCCCAAGGCGTCCCCGCCTCCTCCCGCGGGCCACCCCGGAGCTCACGGGCCCCCCACGGGCGCGCCGCTGCAGCACCCCGCCTTTCTGCCCAGCCACGGACTGTACACCTGCCACATCGGCAAGTTCTCCAACTGGACCAACGGCGCGTTCCTCGCGCAGGGCTCGCTGCTGAACATGCGCTCCTTCCTGGGCGTCGGGGCGCCCCACGCCGCGCCCCACGGGCCGCACCTGCCCGCGCCGCCGCAGCCACAGCCGCCGGTCGCCGTCACCCCCGGGCCACTCCACGTGGACAAGGCCTCGGCCCGCGCCAGCCCTGCGCCCCCAGAGAGAGACCTGGTCCCCAGGCCGGACTCGCCGGCGCAGCCGCTCCAGTCGCCCTTCCAGCCGGTGCGCGACAACTCGCTGGCCCCGCAGGAGGGGACGCCGCGGATCCTGGCTGCGCTCCCGTCGGCCTGA

Related Sequences

XP_004845205.1 Protein

Irx1 PREDICTED: iroquois-class homeodomain protein IRX-1 isoform X2 [Heterocephalus glaber]

Length: 476 aa      View alignments
>XP_004845205.1
MSFPQLGYPQYLGAPGPGAYTGERPGVLAAAAAAAASSGRPGAAELGAGAAAVTSVLGMYAAAGPYAGAPSYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTAPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDKIDEHDGDQSNEDDEDKAEGPRPPAAPSALARERGSPLAAPDVLKPQDSPLGLAKELAEPGSTRLLSPGASAGGLQGTQHSKPKIWSLAETATSPDGAPKASPPPPAGHPGAHGPPTGAPLQHPAFLPSHGLYTCHIGKFSNWTNGAFLAQGSLLNMRSFLGVGAPHAAPHGPHLPAPPQPQPPVAVTPGPLHVDKASARASPAPPERDLVPRPDSPAQPLQSPFQPVRDNSLAPQEGTPRILAALPSA