Details from NCBI annotation

Gene Symbol Lpcat1
Gene Name lysophosphatidylcholine acyltransferase 1, transcript variant X2
Entrez Gene ID 101709594

Database interlinks

Part of NW_004624751.1 (Scaffold)

For more information consult the page for NW_004624751.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LPCAT1 ENSCPOG00000006195 (Guinea pig)

Gene Details

lysophosphatidylcholine acyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005587, Guinea pig)

Protein Percentage 80.04%
CDS Percentage 80.1%
Ka/Ks Ratio 0.11725 (Ka = 0.1212, Ks = 1.0339)

LPCAT1 ENSG00000153395 (Human)

Gene Details

lysophosphatidylcholine acyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000283415, Human)

Protein Percentage 82.21%
CDS Percentage 81.09%
Ka/Ks Ratio 0.08058 (Ka = 0.0946, Ks = 1.1735)

Lpcat1 ENSMUSG00000021608 (Mouse)

Gene Details

lysophosphatidylcholine acyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022099, Mouse)

Protein Percentage 81.84%
CDS Percentage 79.4%
Ka/Ks Ratio 0.08227 (Ka = 0.099, Ks = 1.2037)

Lpcat1 ENSRNOG00000017930 (Rat)

Gene Details

lysophosphatidylcholine acyltransferase 1 (Lpcat1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024111, Rat)

Protein Percentage 81.65%
CDS Percentage 79.15%
Ka/Ks Ratio 0.07939 (Ka = 0.1007, Ks = 1.2684)

Genome Location

Sequence Coding sequence

Length: 1611 bp    Location: 764374..732713   Strand: -
>XM_004845140.1
ATGAGGCTGCGGGGTCGCGGCCCGCGCACCTTCTCCGCCTGCAGCGCAGGGGCGGGCGACACGCGGCGGCTGGCACCCCCCGGGCGGAATCCCTTCGTGCACGAGCTTCGCCTCGGCGCCCTGCAGAAGGTCCAGGTGGCCTTCATGACGCTGACGCTGTTCCCCATCCGCCTCCTGTTTGCCGCCTTCATGATGCTGCTGGCCTGGCCCTTGGCACTCATGGCCTCTCTGGGTCCTGCTGACAAGGAGCCTGAGCAGCCCCCAGCGCTGTGGCGGAGGCTCGTGGACGTCCTGCTCAAGGCCATCATGCGCACCATGTGGTTTGCGGGCGGCTTTCACCACGTGGCCGTGAAGGGGCGGCGGGCGCTGCCCAGTGAGGCCGCCATCCTCACGCTGGCACCGCACTCGTCCTACTTTGACGCCATCCCTGTCACCATGACCATGTCCTCCGTCGTGATGAAGGCGGAAAGCAGGGACATCCCAATTTGGGGAACCCTGATACGGTACATACGGCCAGTGTTCGTGTCCCGGTCCGACCAGGATTCCCGCAGGAAAACCGTGGAGGAGATCAGGAGCCGAGCACAGTCCGGCGGAAAGTGGCCACAGATAATGATTTTCCCAGAAGGAACTTGCACCAATAGGACCTGCCTGATTACCTTCAAGCCGGGTGCGTTCATCCCCGGAGTTCCGGTGCAGCCCGTGGTGCTGAGATACCCGAACAGGCTGGACACCATCACGTGGACGTGGCAGGGGCCCGGAGCGTTGGAGATCCTGTGGCTCACGCTGTGCCAGTTCCACAACCGGGTGGAGATCGAGTTCCTCCCCGTGTACAGCCCTTCGGAGGAGGAGAGGAGGAACCCCGCGCTCTACGCCAGCAACGTGCGGCGCGTCATGGCCGAGGCCCTGGGCATCTCAGTGACCGACTACACCTTCGAAGACTGTCAGCTTGCGCTGGCAGGGGGGCAGCTGCGCCTCCCGGCCGACTCCTGCCTGCTGGAGTTCGCCAGGCTGGTGCGGGGCCTCGGGCTGAGACCCGAAAACCTTGAAAAGGATCTGGACACGTACTGGGAAAGTGCGCAGATGCGGATGCGGAAGGGCGGGAAGGTCGGCCTTGGGGAGTTCGCCGCGTGCCTGCAGGTGCCGGTCTCCCCCGTGCTGGAGGACATGTTCGCGCTCTTCGACGAGGGTGGCTGCGGCGAGGTGGACCTGCGGGAGTGTGTGCTCGCCCTGTCAGCCGTGTGCCGGCCGGCCCGGACCCTGGACACCATCCAGCTGGCGTTCAAGATGTACGGGTCACCCGGGGACGGAGGCGTGGACGAGGACCAGCTGTCGCGCATCCTCAGGACCGCCCTGGGCGTGGCGGAGCTCCCCGTCACTGAGCTGTTCCGGGGCATCGACGAGGAGGAGAAGGGGAGAATCACCTTTGCCGAGTTCCAGAGGTTTGCAGAGCTGTACCCCGACTTCGCCGAGGAGCACCTGCACCCCGAGCGTCAGTCCTTCCATGGCACCACCCTGCCACCACCCACGCCCACCCCCAATGGCTTCTGCACCGACTTCAGCCCCGAGAGCTCGGACTCGGGGACAAAGCCTCGCTGTAAGAAGCTGGACTAG

Related Sequences

XP_004845197.1 Protein

Lpcat1 PREDICTED: lysophosphatidylcholine acyltransferase 1 isoform X2 [Heterocephalus glaber]

Length: 536 aa      View alignments
>XP_004845197.1
MRLRGRGPRTFSACSAGAGDTRRLAPPGRNPFVHELRLGALQKVQVAFMTLTLFPIRLLFAAFMMLLAWPLALMASLGPADKEPEQPPALWRRLVDVLLKAIMRTMWFAGGFHHVAVKGRRALPSEAAILTLAPHSSYFDAIPVTMTMSSVVMKAESRDIPIWGTLIRYIRPVFVSRSDQDSRRKTVEEIRSRAQSGGKWPQIMIFPEGTCTNRTCLITFKPGAFIPGVPVQPVVLRYPNRLDTITWTWQGPGALEILWLTLCQFHNRVEIEFLPVYSPSEEERRNPALYASNVRRVMAEALGISVTDYTFEDCQLALAGGQLRLPADSCLLEFARLVRGLGLRPENLEKDLDTYWESAQMRMRKGGKVGLGEFAACLQVPVSPVLEDMFALFDEGGCGEVDLRECVLALSAVCRPARTLDTIQLAFKMYGSPGDGGVDEDQLSRILRTALGVAELPVTELFRGIDEEEKGRITFAEFQRFAELYPDFAEEHLHPERQSFHGTTLPPPTPTPNGFCTDFSPESSDSGTKPRCKKLD