Details from NCBI annotation

Gene Symbol Pdcd6
Gene Name programmed cell death 6, transcript variant X3
Entrez Gene ID 101698591

Database interlinks

Part of NW_004624751.1 (Scaffold)

For more information consult the page for NW_004624751.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDCD6 ENSCPOG00000024481 (Guinea pig)

Gene Details

programmed cell death 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018198, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 94.36%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.2981)

PDCD6 ENSG00000249915 (Human)

Gene Details

programmed cell death 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000264933, Human)

Protein Percentage 99.47%
CDS Percentage 89.77%
Ka/Ks Ratio 0.00247 (Ka = 0.0022, Ks = 0.9)

Pdcd6 ENSMUSG00000021576 (Mouse)

Gene Details

programmed cell death 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022060, Mouse)

Protein Percentage 100.0%
CDS Percentage 91.71%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.4976)

Pdcd6 ENSRNOG00000014485 (Rat)

Gene Details

programmed cell death 6 (Pdcd6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019735, Rat)

Protein Percentage 99.47%
CDS Percentage 90.83%
Ka/Ks Ratio 0.00438 (Ka = 0.0024, Ks = 0.5459)

Genome Location

Sequence Coding sequence

Length: 570 bp    Location: 99860..120963   Strand: +
>XM_004845105.1
ATGGCCGCCTACTCATACCGCCCGGGCCCCGGCCCCGGCCCTGCTGCGGGCGCTGCGCTGCCGGACCAGAGCTTCCTGTGGAACGTCTTCCAGCGTGTTGATAAAGACAGGAGTGGGGTGATATCAGACAACGAGCTTCAGCAAGCATTGTCCAATGGCACATGGACCCCATTTAACCCAGTGACTGTCAGGTCAATTATTTCTATGTTTGACCGGGAGAACAAAGCTGGTGTGAACTTCAGCGAGTTCACGGGCGTGTGGAAGTACATCACAGACTGGCAGAACGTCTTCCGCACCTACGACAGGGACAACTCGGGGATGATTGACAAGAACGAGCTCAAGCAAGCACTCTCAGGTTTTGGCTACCGGCTCTCTGACCAGTTCCACGACATCCTCATCCGCAAGTTTGACAGACAAGGACGAGGGCAGATTGCCTTTGACGACTTCATCCAGGGCTGCATCGTCTTGCAGAGGCTGACAGACATATTCAGACGCTACGACACAGATCAGGACGGCTGGATCCAGGTGTCTTACGAGCAGTATCTCTCCATGGTCTTCAGCATCGTATAA

Related Sequences

XP_004845162.1 Protein

Pdcd6 PREDICTED: programmed cell death protein 6 isoform X3 [Heterocephalus glaber]

Length: 189 aa      View alignments
>XP_004845162.1
MAAYSYRPGPGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV