Sequence details NCBI ID: XM_004844991.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ppp1r12a
Gene Name protein phosphatase 1, regulatory subunit 12A, transcript variant X1
Entrez Gene ID 101700150

Database interlinks

Part of NW_004624750.1 (Scaffold)

For more information consult the page for NW_004624750.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PPP1R12A ENSCPOG00000004019 (Guinea pig)

Gene Details

protein phosphatase 1, regulatory subunit 12A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003625, Guinea pig)

Protein Percentage 97.47%
CDS Percentage 95.78%
Ka/Ks Ratio 0.07719 (Ka = 0.0125, Ks = 0.1616)

PPP1R12A ENSG00000058272 (Human)

Gene Details

protein phosphatase 1, regulatory subunit 12A

External Links

Gene Match (Ensembl Protein ID: ENSP00000389168, Human)

Protein Percentage 97.08%
CDS Percentage 94.64%
Ka/Ks Ratio 0.05925 (Ka = 0.0131, Ks = 0.2206)

Ppp1r12a ENSMUSG00000019907 (Mouse)

Gene Details

protein phosphatase 1, regulatory (inhibitor) subunit 12A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069257, Mouse)

Protein Percentage 92.09%
CDS Percentage 87.59%
Ka/Ks Ratio 0.07623 (Ka = 0.0423, Ks = 0.5546)

Ppp1r12a ENSRNOG00000004925 (Rat)

Gene Details

protein phosphatase 1, regulatory subunit 12A (Ppp1r12a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006773, Rat)

Protein Percentage 93.87%
CDS Percentage 89.65%
Ka/Ks Ratio 0.071 (Ka = 0.0318, Ks = 0.4474)

Genome Location

Sequence Coding sequence

Length: 3084 bp    Location: 18363617..18497129   Strand: +
Raw sequence   
>XM_004844991.1
ATGAAGATGGCGGACGCGAAGCAGAAGCGGAACGAGCAGCTGAAGCGCTGGATCGGCTCCGAGACGGACCTTGAGCCGCCCGTGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGATGGCGCCGTCTTTCTGGCTGCTTGTTCCAGCGGCGACACGGACGAGGTGCTCAAGCTGCTGCACCGCGGCGCGGACATCAATTACGCCAATGTGGACGGACTCACTGCCCTGCATCAGGCTTGCATTGATGACAATGTTGATATGGTGAAGTTTCTGGTAGAAAATGGAGCAAATATTAATCAACCTGATAATGAAGGCTGGATACCACTACATGCAGCTGCTTCCTGTGGATATCTCGATATTGCAGAGTTTTTGATTGGTCAGGGAGCACATGTAGGAGCTGTCAACAGTGAAGGAGACACGCCTTTAGATATTGCAGAGGAGGAGGCAATGGAAGAACTACTTCAAAATGAAGTTAACCGGCAAGGGGTTGATATAGAAGCAGCGCGAAAGGAAGAAGAACGGATAATGCTTAGAGATGCAAGGCAGTGGTTGAATAGTGGCCATATAAATGATGTGCGGCATGCGAAATCTGGAGGTACAGCACTTCATGTTGCAGCCGCTAAAGGCTATACAGAAGTTTTAAAACTTTTGATACAGGCAGGCTATGATGTTAACATTAAAGATTATGATGGCTGGACACCTCTTCATGCTGCAGCTCATTGGGGTAAAGAAGAAGCATGCCGAATTTTAGTGGACAATCTGTGTGATATGGAGATGGTCAACAAAGTGGGCCAAACAGCCTTTGATGTAGCAGATGAAGACATTTTAGGATATTTAGAAGAGTTGCAAAAAAAACAAAATCTGCTCCATAGTGAAAAACGAGATAAGAAATCTCCATTAATTGAATCAACAGCAAATATGGACAATAACCAGTCACAGAAGACCTTTAAAAACAAAGAAACGCTGATTATTGAGCCAGAGAAAAATGCATCCCGTATTGAGTCTCTAGAACAAGAAAAGGTTGATGAAGAAGAAGAAGGGAAGAAAGATGAATCCAGTTGTTCCAGTGAAGAAGATGAGGAAGATGACTCAGAATCAGAAGCTGAAACAGATAAGACAAAACCCATTGCTTCTGTAACTAATGCCAACACTTCTAGTACACAAGCAGCTCCTGTAGCTGTTACAACACCTACTCTGTCATCCAGTCAGGCAACGCCCACATCACCTATTAAAAAGTTTCCAACATCAACTACAAAAATTTCTCCCAAAGAAGAAGAGAGAAAAGATGAGTCTCCTGCATCTTGGAGGCTAGGACTCAGAAAGACTGGGAGTTATGGTGCACTTGCTGAAATCACAGCATCAAAAGAAGCTCAGAAAGAAAAAGACACTGCAGGGGTTATACGTTCAGCTTCAAGCCCCAGACTTTCCTCTTCTTTGGATAATAAAGAAAAGGAAAGAGATAGTAAAGGTACAAGGCTTGCGTATGTTACACCTACAATACCAAGACGGCTAGCTAGTACATCTGACATTGAAGAGAAAGAAAACAGAGACTCTTTAAGTTTGCGAACAAGCAGTTCTTATACAAGAAGAAAATGGGAAGATGATCTTAAAAAAAATAGCTCAATTAATGAAGGATCAACTTATCATAAAAGTTGCTCCTTTGGTAGAAGACAAGATGATTTGATTAGTTCTAGTGTTCCAAGCACGACATCAACACCAACAGTTACCTCTGCAGCTGGACTTCAGAAAAGCCTGCTTTCCAGCACAAGCACTACTGCAAAGATTACGACGGGTTCTTCCTCAGTGGGCACACAGAGCAGTACCTCAAATCGTTTGTGGGCTGAGGATGGTACTGAAAAAGAAAAGGACAGTGTTCCTACGGCAGTGACCATTCCTGTTGCTCCAACTGTTGTAAATGCTGCAGCTCCTACCACAACCCTGACAACAACTACTGCTGGCACTGTCTCTTCTACATCAGAGGTCAGGGAGAGACGCAGATCATACCTCACTCCTGTTAGGGATGAAGAATCTGAATCCCAAAGAAAAGCAAGATCTAGACAAGCAAGACAGTCTAGAAGATCAACACAGGGAGTGACATTGACTGATCTTCAAGAAGCTGAAAAAACAATAGGAAGAAGTCGTTCTACCAGAACTAGAGAACAAGAAAATGAAGAAAAAGAGGAAAAAGAAAAACAGGATAAGGAGAAACAAGAGGAAAAGAGGGAATCAGAAACATCTAGAGAAGATGAATATAAACAAAAGTATTCCAGAACATATGATGAGACTTATCCACGTTATAGACCAGTATCAACTTCGAGTTCAGCCACTTCCTCTTCACATTCTACAATGAGCAGTTCACTTTATTCTTCAAGTCAACTAAATAGGCCAAATAGTCTTGTGGGAATAACTTCTGCTTACTCCAGAGGATTAACAAAAGAAAATGAAAGAGAAGGAGAAAAAAAAGAAGACGAAAAAGAAGGTGAAGATAAATCACAACCTAAATCCATCAGAGAACGACGGCGACCAAGAGAGAAAAGAAGATCTACAGGAGTTTCCTTTTGGACACAAGATAGTGATGAAAATGAACAAGAGCAACAGTCAGATACAGAAGAGGGATCCAATAAAAAAGAAACTCAGACGGATTCCATTTCTAGGTATGAAACCAGTTCCACATCAACTAGTGATCGTTATGATTCCCTGCTGGGTCGCTCTGGATCATACAGTTACTTAGAAGAAAGAAAACCATATAGTAGCAGGCTAGAAAAGGACGACTCAACTGATTTTAAAAAGCTTTATGAACAAATTTTAGCTGAAAATGAAAAGCTGAAGGCACAGCTACATGATACAAATATGGAACTAACAGACCTTAAATTGCAGTTGGAAAAGGCCACCCAGAGACAAGAAAGGTATACTGATAGGTCACTATTGGAAAAGGAAAAAAGGGAACGAAGAGCTCTAGAAAGAAGAATATCTGAAATGGAAGAAGAGCTCAAAATGTTACCAGACCTAAAAGCAGACAACCAGAGGCTAAAGGATGAAAATGGGGCCTTGATCAGAGTTATAAGCAAACTTTCCAAATAG

Related Sequences

XP_004845048.1 Protein

Ppp1r12a PREDICTED: protein phosphatase 1 regulatory subunit 12A isoform X1 [Heterocephalus glaber]

Length: 1027 aa      View alignments
>XP_004845048.1
MKMADAKQKRNEQLKRWIGSETDLEPPVVKRQKTKVKFDDGAVFLAACSSGDTDEVLKLLHRGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEFLIGQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAGYDVNIKDYDGWTPLHAAAHWGKEEACRILVDNLCDMEMVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKRDKKSPLIESTANMDNNQSQKTFKNKETLIIEPEKNASRIESLEQEKVDEEEEGKKDESSCSSEEDEEDDSESEAETDKTKPIASVTNANTSSTQAAPVAVTTPTLSSSQATPTSPIKKFPTSTTKISPKEEERKDESPASWRLGLRKTGSYGALAEITASKEAQKEKDTAGVIRSASSPRLSSSLDNKEKERDSKGTRLAYVTPTIPRRLASTSDIEEKENRDSLSLRTSSSYTRRKWEDDLKKNSSINEGSTYHKSCSFGRRQDDLISSSVPSTTSTPTVTSAAGLQKSLLSSTSTTAKITTGSSSVGTQSSTSNRLWAEDGTEKEKDSVPTAVTIPVAPTVVNAAAPTTTLTTTTAGTVSSTSEVRERRRSYLTPVRDEESESQRKARSRQARQSRRSTQGVTLTDLQEAEKTIGRSRSTRTREQENEEKEEKEKQDKEKQEEKRESETSREDEYKQKYSRTYDETYPRYRPVSTSSSATSSSHSTMSSSLYSSSQLNRPNSLVGITSAYSRGLTKENEREGEKKEDEKEGEDKSQPKSIRERRRPREKRRSTGVSFWTQDSDENEQEQQSDTEEGSNKKETQTDSISRYETSSTSTSDRYDSLLGRSGSYSYLEERKPYSSRLEKDDSTDFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQERYTDRSLLEKEKRERRALERRISEMEEELKMLPDLKADNQRLKDENGALIRVISKLSK