Details from NCBI annotation

Gene Symbol Atp2b1
Gene Name ATPase, Ca++ transporting, plasma membrane 1, transcript variant X2
Entrez Gene ID 101725886

Database interlinks

Part of NW_004624750.1 (Scaffold)

For more information consult the page for NW_004624750.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP2B1 ENSCPOG00000015527 (Guinea pig)

Gene Details

ATPase, Ca++ transporting, plasma membrane 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014003, Guinea pig)

Protein Percentage 99.84%
CDS Percentage 96.64%
Ka/Ks Ratio 0.00474 (Ka = 0.0007, Ks = 0.1546)

ATP2B1 ENSG00000070961 (Human)

Gene Details

ATPase, Ca++ transporting, plasma membrane 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000392043, Human)

Protein Percentage 99.34%
CDS Percentage 96.26%
Ka/Ks Ratio 0.01938 (Ka = 0.0033, Ks = 0.169)

Atp2b1 ENSMUSG00000019943 (Mouse)

Gene Details

ATPase, Ca++ transporting, plasma membrane 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020107, Mouse)

Protein Percentage 99.34%
CDS Percentage 90.3%
Ka/Ks Ratio 0.00682 (Ka = 0.0035, Ks = 0.5063)

Atp2b1 ENSRNOG00000004026 (Rat)

Gene Details

ATPase, Ca++ transporting, plasma membrane 1 (Atp2b1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005491, Rat)

Protein Percentage 99.43%
CDS Percentage 89.26%
Ka/Ks Ratio 0.00522 (Ka = 0.0031, Ks = 0.5893)

Genome Location

Sequence Coding sequence

Length: 3663 bp    Location: 16990732..17100806   Strand: +
>XM_004844983.1
ATGGGCGACATGGCAAACAATTCAGTTGCGTACAGTGGTGTGAAAAACTCTTTGAAAGAAGCTAATCATGATGGAGACTTTGGAATTACGCTCGCAGAGCTGCGGGCTCTTATGGAGCTCAGGTCCACAGATGCATTACGAAAAATACAGGAAAGCTATGGAGATGTCTACGGAATTTGCACCAAGTTGAAAACATCTCCCAATGAAGGTTTAAGTGGAAACCCTGCAGATTTAGAAAGAAGAGAAGCAGTGTTTGGAAAGAACTTTATACCTCCTAAAAAGCCAAAAACTTTTCTTCAATTAGTATGGGAAGCATTACAAGATGTCACTTTAATTATATTAGAAATTGCAGCTATAGTATCATTGGGCCTTTCTTTTTATCAACCTCCAGAAGGAAATTCTGCACTTTGTGGAGAAGTTTCTGTCGGGGAGGAAGAAGGTGAAGGTGAAACTGGCTGGATTGAAGGAGCCGCAATCCTGTTGTCAGTGGTGTGTGTGGTATTAGTAACAGCTTTTAATGATTGGAGTAAGGAAAAACAATTTAGAGGCTTGCAAAGTCGAATTGAACAAGAACAGAAGTTCACCGTCATCAGGGGTGGTCAGGTCATTCAGATTCCTGTAGCTGACATTACTGTTGGAGATATTGCTCAAGTGAAATACGGTGATCTTCTTCCAGCTGATGGTATACTTATTCAAGGCAATGATCTTAAAATTGATGAAAGCTCATTGACTGGTGAATCTGATCATGTTAAGAAGTCTTTAGATAAGGATCCCTTACTTCTATCAGGTACTCATGTAATGGAAGGTTCTGGCAGAATGGTAGTTACTGCTGTAGGTGTAAATTCCCAGACTGGAATTATCTTTACCTTACTTGGAGCTGGAGGTGAAGAGGAAGAGAAGAAAGATGAGAAGAAAAAGGAAAAGAAAAATAAGAAACAAGATGGAGCTATTGAGAATCGAAACAAAGCAAAAGCTCAGGATGGTGCAGCCATGGAAATGCAGCCATTAAAGAGTGAAGACGGTGGAGATGGTGATGAGAAAGACAAAAAGAAAGCAAATTTGCCAAAAAAGGAAAAATCCGTTTTACAAGGGAAACTAACAAAACTGGCTGTTCAGATTGGCAAAGCAGGTCTGTTGATGTCTGCCATCACAGTTATCATTCTAGTATTATATTTTGTAATTGATACATTCTGGGTTCAGAAGAGACCATGGCTTGCTGAGTGCACACCGATTTACATACAATATTTTGTGAAGTTCTTCATTATCGGAGTTACGGTTTTAGTGGTCGCAGTGCCAGAAGGTCTTCCACTTGCAGTCACTATTTCACTGGCTTATTCAGTCAAGAAAATGATGAAAGATAATAACTTAGTAAGGCATCTGGATGCTTGTGAAACCATGGGAAATGCTACAGCTATTTGTTCAGATAAGACAGGAACATTGACAATGAACAGAATGACAGTTGTTCAAGCTTACATAAATGAAAAACATTATAAAAAGGTTCCTGAACCAGAAGCTATTCCACCAAATATTTTGTCCTATCTTGTGACAGGAATTTCTGTGAATTGTGCTTATACATCAAAAATATTGCCACCAGAGAAGGAGGGTGGATTACCTCGTCATGTTGGTAATAAAACTGAATGTGCCTTGTTGGGATTTCTTTTGGATTTAAAACGGGATTATCAGGATGTTAGAAATGAAATACCAGAAGAAGCACTGTATAAAGTCTACACCTTCAATTCTGTTCGGAAGTCCATGAGCACTGTCTTGAAAAATTCAGATGGAAGCTTTCGAATATTCAGCAAGGGTGCCTCTGAGATAATTCTGAAAAAGTGTTTCAAAATCTTGAGTGCTAATGGTGAGGCAAAAGTATTCAGACCAAGGGACCGTGATGATATTGTAAAAACTGTGATTGAACCGATGGCATCAGAAGGCTTGAGAACCATATGTCTTGCATTCAGAGATTTTCCAGCAGGAGAACCAGAACCAGAGTGGGATAATGAAAATGATATTGTCACCGGCCTTACATGCATTGCTGTTGTGGGGATTGAAGATCCTGTGAGACCTGAGGTACCAGATGCAATAAAGAAATGTCAGAGGGCTGGAATTACTGTACGAATGGTCACTGGTGATAATATTAATACTGCTCGAGCTATTGCTACGAAGTGTGGTATTTTACATCCTGGGGAAGATTTTCTGTGCCTGGAAGGTAAAGATTTTAACAGAAGAATACGAAATGAAAAAGGAGAGATTGAACAAGAGCGGATAGACAAAATTTGGCCAAAGCTTCGAGTACTTGCAAGATCCTCTCCTACTGACAAGCATACACTGGTTAAAGGTATAATTGACAGCACTGTCTCAGAACAACGCCAAGTTGTAGCTGTAACTGGTGATGGTACAAATGATGGCCCAGCGCTAAAGAAAGCAGATGTTGGATTTGCAATGGGTATTGCTGGAACTGATGTAGCTAAAGAAGCATCTGATATTATTCTCACAGATGACAACTTTACAAGCATTGTTAAAGCAGTTATGTGGGGACGAAATGTCTATGACAGCATCTCAAAATTTCTGCAGTTCCAACTTACTGTTAATGTTGTAGCAGTGATTGTTGCTTTCACAGGAGCTTGTATTACTCAAGATTCACCGCTTAAAGCTGTGCAGATGCTGTGGGTAAACCTCATAATGGACACACTTGCTTCCCTGGCTCTGGCAACGGAACCACCCACTGAGTCTCTCTTACTTCGGAAACCGTACGGTAGAAATAAGCCTCTCATCTCACGCACAATGATGAAGAATATTTTGGGTCATGCATTCTATCAACTCGTAGTAGTTTTTACACTCTTATTTGCTGGAGAAAAGTTTTTTGATATTGATAGTGGAAGAAATGCTCCTTTGCATGCTCCTCCTTCAGAACATTATACTATTGTTTTTAATACCTTTGTGCTGATGCAACTTTTCAATGAAATAAATGCCCGGAAAATCCATGGTGAAAGAAATGTGTTTGAAGGAATCTTTAATAACGCCATCTTCTGCTCAATTGTTTTAGGCACTTTTGTGGTACAGATAATAATTGTGCAGTTTGGTGGAAAGCCTTTCAGTTGTTCAGAGCTTTCAGTAGAACAGTGGCTATGGTCAATATTCCTCGGAATGGGGACATTACTCTGGGGCCAGCTTATTTCAACAATTCCAACTAGCCGTTTAAAATTCCTGAAAGAAGCTGGTCATGGAACACAAAAGGAAGAAATACCTGAAGAGGAGTTAGCAGAGGATGTTGAAGAGATAGATCACGCTGAAAGGGAGTTGCGGCGTGGCCAAATCTTGTGGTTTAGAGGTCTGAACAGAATCCAAACTCAGATTCGAGTGGTGAATGCATTTCGTAGTTCTTTATATGAAGGGTTAGAAAAACCAGAATCAAGAAGTTCGATTCACAACTTTATGACACATCCTGAGTTTAGGATAGAAGATTCAGAGCCTCATATTCCCCTCATTGATGACACTGATGCAGAAGATGATGCTCCTACAAAACGTAACTCCAGTCCTCCTCCCTCTCCCAACAAAAATAACAATGCTGTTGACAGCGGAATTCACCTTACAATAGAAATGAACAAGTCTGCTACCTCTTCATCCCCAGGAAGCCCACTACATAGTTTGGAAACATCACTCTGA

Related Sequences

XP_004845040.1 Protein

Atp2b1 PREDICTED: plasma membrane calcium-transporting ATPase 1 isoform X2 [Heterocephalus glaber]

Length: 1220 aa      View alignments
>XP_004845040.1
MGDMANNSVAYSGVKNSLKEANHDGDFGITLAELRALMELRSTDALRKIQESYGDVYGICTKLKTSPNEGLSGNPADLERREAVFGKNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIVSLGLSFYQPPEGNSALCGEVSVGEEEGEGETGWIEGAAILLSVVCVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRGGQVIQIPVADITVGDIAQVKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLDKDPLLLSGTHVMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDEKKKEKKNKKQDGAIENRNKAKAQDGAAMEMQPLKSEDGGDGDEKDKKKANLPKKEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGGLPRHVGNKTECALLGFLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSFRIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAGEPEPEWDNENDIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMVTGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCSIVLGTFVVQIIIVQFGGKPFSCSELSVEQWLWSIFLGMGTLLWGQLISTIPTSRLKFLKEAGHGTQKEEIPEEELAEDVEEIDHAERELRRGQILWFRGLNRIQTQIRVVNAFRSSLYEGLEKPESRSSIHNFMTHPEFRIEDSEPHIPLIDDTDAEDDAPTKRNSSPPPSPNKNNNAVDSGIHLTIEMNKSATSSSPGSPLHSLETSL