Details from NCBI annotation

Gene Symbol Lum
Gene Name lumican
Entrez Gene ID 101724760

Database interlinks

Part of NW_004624750.1 (Scaffold)

For more information consult the page for NW_004624750.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LUM ENSCPOG00000000676 (Guinea pig)

Gene Details

lumican

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000598, Guinea pig)

Protein Percentage 90.8%
CDS Percentage 88.72%
Ka/Ks Ratio 0.14151 (Ka = 0.0496, Ks = 0.3501)

LUM ENSG00000139329 (Human)

Gene Details

lumican

External Links

Gene Match (Ensembl Protein ID: ENSP00000266718, Human)

Protein Percentage 84.27%
CDS Percentage 85.56%
Ka/Ks Ratio 0.20226 (Ka = 0.0876, Ks = 0.4331)

Lum ENSMUSG00000036446 (Mouse)

Gene Details

lumican

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000040877, Mouse)

Protein Percentage 86.31%
CDS Percentage 82.04%
Ka/Ks Ratio 0.11735 (Ka = 0.0875, Ks = 0.7456)

Lum ENSRNOG00000004610 (Rat)

Gene Details

lumican (Lum), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006109, Rat)

Protein Percentage 85.42%
CDS Percentage 81.75%
Ka/Ks Ratio 0.10819 (Ka = 0.0873, Ks = 0.8072)

Genome Location

Sequence Coding sequence

Length: 1014 bp    Location: 15553419..15559408   Strand: +
>XM_004844979.1
ATGAATCTAGGTGCACTAATTTTCTTCTTGGCATTGACTAGCAGTGCCAATGGGCACTACTACGATTATGATTACTACCCCGCTTTTTTGCGTTCCTCACCAAACTGTGCACCAGAATGCAACTGCCCAGAGAGCTACCCAACTGCCATGTACTGCGATAAGCTGAAGCTGAAAAGTGTACCAATTATTCCTCCTGGAATCAAGTACCTTTATCTTAGGAATAACCAGATTGATCGTATTGATGAAAAGGCCTTTGAGAACGTAACTGATCTGCAGTGGCTTATTTTAGATCACAATCTTCTAGAAAACTCCAAGATAAAAGGCAAAGTTTTCTCTAAACTGAAACAACTGAAGAAGCTGCATATAAACTACAACAATCTGACAGAGTCTGTCAGCCCACTTCCCAAAACGCTGGAGGATCTGCAGCTTACTAATAACAAGATCACGAAGCTTGGCTCCTTTGAAGGACTGGTAAACTTGACCTTTATCCACCTTCAACACAATCAGCTGAAAGAGGAAGCCATTTCTGCTGCTTTGAGAGGTCTTAAGTCACTTGAGTACCTTGACTTGAGTTTCAACCAGTTGGCCAAGCTCCCATCTGGCCTCCCTGTGTCTCTTCTAACTCTGTACCTAGACAACAATCAGATTAAAAATATCCCTGATGAGTATTTTAAGCGTTTTAATGCACTGCAATACCTGCGTTTATCTCACAATGAACTGGCTGATAGTGGGATCCCTGGAAATACTTTTAATATATCATCCCTCCTTGAGCTGGATCTCTCCTATAATAAGCTTAAAAGTATACCAAATGTCAATGAAAACCTTGAAAACTATTACTTGGAGGTCAATGAACTTGAAAAGTTTGATGTAAAGAGCTTCTGTAAAATTCTGGGACCATTGTCCTACTCCAAGATCAAACATTTGCGCTTGGATGGCAATCTCTTAACTCAAAGCAGCCTGCCACCTGATATGTACGAATGTCTACGTGTATTGAATGAAATCACCATTACTTAA

Related Sequences

XP_004845036.1 Protein

Lum PREDICTED: lumican [Heterocephalus glaber]

Length: 337 aa      View alignments
>XP_004845036.1
MNLGALIFFLALTSSANGHYYDYDYYPAFLRSSPNCAPECNCPESYPTAMYCDKLKLKSVPIIPPGIKYLYLRNNQIDRIDEKAFENVTDLQWLILDHNLLENSKIKGKVFSKLKQLKKLHINYNNLTESVSPLPKTLEDLQLTNNKITKLGSFEGLVNLTFIHLQHNQLKEEAISAALRGLKSLEYLDLSFNQLAKLPSGLPVSLLTLYLDNNQIKNIPDEYFKRFNALQYLRLSHNELADSGIPGNTFNISSLLELDLSYNKLKSIPNVNENLENYYLEVNELEKFDVKSFCKILGPLSYSKIKHLRLDGNLLTQSSLPPDMYECLRVLNEITIT