Details from NCBI annotation

Gene Symbol Ccdc38
Gene Name coiled-coil domain containing 38, transcript variant X1
Entrez Gene ID 101701464

Database interlinks

Part of NW_004624750.1 (Scaffold)

For more information consult the page for NW_004624750.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC38 ENSCPOG00000013904 (Guinea pig)

Gene Details

coiled-coil domain containing 38

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012531, Guinea pig)

Protein Percentage 79.14%
CDS Percentage 84.46%
Ka/Ks Ratio 0.361 (Ka = 0.1346, Ks = 0.3729)

CCDC38 ENSG00000165972 (Human)

Gene Details

coiled-coil domain containing 38

External Links

Gene Match (Ensembl Protein ID: ENSP00000345470, Human)

Protein Percentage 72.13%
CDS Percentage 80.29%
Ka/Ks Ratio 0.29581 (Ka = 0.1674, Ks = 0.5659)

Ccdc38 ENSMUSG00000036168 (Mouse)

Gene Details

coiled-coil domain containing 38

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000089860, Mouse)

Protein Percentage 72.5%
CDS Percentage 76.65%
Ka/Ks Ratio 0.18311 (Ka = 0.171, Ks = 0.9338)

Ccdc38 ENSRNOG00000021892 (Rat)

Gene Details

Protein Ccdc38

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031846, Rat)

Protein Percentage 72.32%
CDS Percentage 75.96%
Ka/Ks Ratio 0.1938 (Ka = 0.1816, Ks = 0.9373)

Genome Location

Sequence Coding sequence

Length: 1689 bp    Location: 11377379..11430225   Strand: +
>XM_004844914.1
ATGACATCACAGGTCTTGCAGGCTTCAGTGAATTTTGAAGATAATATAAAGGATGACTCAACCAAAAAGGACAAGCCTTATAAGATCTTTTTCCAAGATCTCTTTCTCTACAAACAAAATGAATTGGCAGCAAAGAAAAAGGAAAAAATTTTGAACCGTAGCATGAAAGTCCACCAGAAAACTACTTTCTCATCCCGAATGAAGAGTCGCTCACACCTGAGCCAAATAGCTTTCCACTCTGACACAGATGATATCTCATTTGAAAAACTGGGGCTGGATCCGATGCTTATTCTGAAATTAACAGAAACTGCAGACACTAAAAGGACTCTCCATGAATTTATTAGTGACCAGAGAGAGAGGTTTCTACTTGAGTATACTCTGTCAACCAAGAGAAACACAATTAAAAGACTTGAAAAACACATAGCTGTAAAGGAAATGCAGCTCAAAAAAGCAGAACAAAAGCTTCAAGACAACGCACTAGCCTTTGAAGAGTTCCTTCGAGAAAATGACCAGCAATCTGCAGATGCTATGAAAATTGCAGCACAAGAAACTATCAACAAACTCCAAATGACAGCCGAGCTGAAGAAAGCCAGCATGGAGGTTCAGGCAATGAAGAGTGAAATAGCAAACAAAGAATTCCTCCTTTGGGAGTACATGAAATATGGATTTTTTCTGCTGAAATTGTCTCCAAAACATTGGCAAATCCAGCAAGCACTAAAAAGATCACAGACATCAAAAATTCATTCCCTTCTTCCAAAACTATTAACAAGAAAGCAACTCAAGAAGCCCACTCTCAACCCAGAGGCTAGGAGATCACCCGTATCCAACCTGCCTGCAAGTATTGGTTCTGATGACAGTCTGGAATTCTTTTTAGATGATGACATGGACTTTGCTCTGCTGCCGGAGCTCTATTTCAAGGAACCAGAAGAGTTGCTTCAGGTCCTCACAGATCTGGAGGAGCAGAATCTGACTTTGGTCCAATATTCCCAAGATGTAGCTGAAAATCTTGAAGAGGTAAACAAAAGAGAAAAAGTTATACAGGACAAAATAAATAGCAACATCGAGTTTCTGCTGGAGCACAAGGAGGTGCTGAAGGCTAGCTGCTTGCGAGAAGAGGAAAAGGCAGCCGAATTGGAATTGCGCTCCAGGCTCTTCAGTTTTGGAGAATTTAATTCAGATGCTCAGGAAAAACTGATAGACTCACTTAGTAAAAAAATTAATCAAGTGTACAAAGTCTGCATTGGCGATGGTGAGGTTGGCAGCCTGAACCCAGTTCAAAAGCTGGTCAAAGTGGAGTCACGCCTGGTGGAGCTGAGCGACCTCATCGAGTCCGTTCCCAAGGAAAATGTGGAAGCAATCGAGAGGCTGAAGCAGAAGGAGCGGCGGCAAAAGCTGCGTGACGAGAAAATAAAAGAAAAACAAAGATACCAAGAAGAAAGGCTAAAAGCTGCTCTGGAAAGGGCAGTAGCCCAACCAAAGAAAAAGGTCTGTTTGCTACTAGGCCCAGCCACATCAACACGACTGCTGATGCGGTATAAAAACAAAACACCTCATTCTTCTGACTGTTCCAGGTGGGAAGACGACTTATCCACCGTTCACAACCTCCACCTGGTAACAAACACAAAATGCTTTTGGTCAGTGACACAAGAACAAAATCACAGGAGGAAGATTTTTTTTTCAGTTGAATAG

Related Sequences

XP_004844971.1 Protein

Ccdc38 PREDICTED: coiled-coil domain-containing protein 38 isoform X1 [Heterocephalus glaber]

Length: 562 aa      View alignments
>XP_004844971.1
MTSQVLQASVNFEDNIKDDSTKKDKPYKIFFQDLFLYKQNELAAKKKEKILNRSMKVHQKTTFSSRMKSRSHLSQIAFHSDTDDISFEKLGLDPMLILKLTETADTKRTLHEFISDQRERFLLEYTLSTKRNTIKRLEKHIAVKEMQLKKAEQKLQDNALAFEEFLRENDQQSADAMKIAAQETINKLQMTAELKKASMEVQAMKSEIANKEFLLWEYMKYGFFLLKLSPKHWQIQQALKRSQTSKIHSLLPKLLTRKQLKKPTLNPEARRSPVSNLPASIGSDDSLEFFLDDDMDFALLPELYFKEPEELLQVLTDLEEQNLTLVQYSQDVAENLEEVNKREKVIQDKINSNIEFLLEHKEVLKASCLREEEKAAELELRSRLFSFGEFNSDAQEKLIDSLSKKINQVYKVCIGDGEVGSLNPVQKLVKVESRLVELSDLIESVPKENVEAIERLKQKERRQKLRDEKIKEKQRYQEERLKAALERAVAQPKKKVCLLLGPATSTRLLMRYKNKTPHSSDCSRWEDDLSTVHNLHLVTNTKCFWSVTQEQNHRRKIFFSVE